Experiment: m.b. Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_458 and HP15_459 are separated by 46 nucleotides HP15_459 and HP15_460 are separated by 184 nucleotides HP15_460 and HP15_461 are separated by 8 nucleotides
HP15_458: HP15_458 - transcriptional regulator, LysR family protein, at 464,016 to 464,906
_458
HP15_459: HP15_459 - glycine cleavage H-protein, subgroup, at 464,953 to 465,345
_459
HP15_460: HP15_460 - SAM-dependent methyltransferase, at 465,530 to 466,735
_460
HP15_461: HP15_461 - Histidinol-phosphatase (EC:3.1.3.15) <small>(from data)</small>, at 466,744 to 467,400
_461
Position (kb) 465
466
467 Strain fitness (log2 ratio) -2
-1
0
1
2 at 464.541 kb on - strand, within HP15_458 at 464.552 kb on + strand, within HP15_458 at 464.552 kb on + strand, within HP15_458 at 464.552 kb on + strand, within HP15_458 at 464.662 kb on - strand, within HP15_458 at 464.677 kb on - strand, within HP15_458 at 464.677 kb on - strand, within HP15_458 at 464.758 kb on - strand, within HP15_458 at 464.764 kb on - strand, within HP15_458 at 464.800 kb on - strand, within HP15_458 at 464.845 kb on + strand at 464.900 kb on + strand at 464.921 kb on - strand at 465.233 kb on - strand, within HP15_459 at 465.233 kb on - strand, within HP15_459 at 465.436 kb on - strand at 465.612 kb on + strand at 465.703 kb on - strand, within HP15_460 at 465.703 kb on - strand, within HP15_460 at 465.715 kb on - strand, within HP15_460 at 465.743 kb on - strand, within HP15_460 at 465.758 kb on - strand, within HP15_460 at 465.758 kb on - strand, within HP15_460 at 465.944 kb on - strand, within HP15_460 at 465.966 kb on + strand, within HP15_460 at 465.971 kb on + strand, within HP15_460 at 466.424 kb on - strand, within HP15_460 at 466.488 kb on - strand, within HP15_460 at 466.489 kb on - strand, within HP15_460 at 466.500 kb on + strand, within HP15_460 at 466.513 kb on - strand, within HP15_460 at 467.084 kb on + strand, within HP15_461 at 467.448 kb on + strand at 467.456 kb on - strand at 467.572 kb on - strand at 467.590 kb on + strand at 467.598 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.008 mg/ml remove 464,541 - HP15_458 0.59 +1.6 464,552 + HP15_458 0.60 +0.8 464,552 + HP15_458 0.60 -0.0 464,552 + HP15_458 0.60 -1.2 464,662 - HP15_458 0.73 +0.0 464,677 - HP15_458 0.74 -1.4 464,677 - HP15_458 0.74 -0.2 464,758 - HP15_458 0.83 +1.3 464,764 - HP15_458 0.84 +0.6 464,800 - HP15_458 0.88 +0.9 464,845 + +0.7 464,900 + -1.0 464,921 - +0.4 465,233 - HP15_459 0.71 +0.0 465,233 - HP15_459 0.71 -0.9 465,436 - -1.2 465,612 + -0.7 465,703 - HP15_460 0.14 -0.6 465,703 - HP15_460 0.14 +0.3 465,715 - HP15_460 0.15 -0.1 465,743 - HP15_460 0.18 -0.1 465,758 - HP15_460 0.19 -0.4 465,758 - HP15_460 0.19 -0.4 465,944 - HP15_460 0.34 -1.9 465,966 + HP15_460 0.36 -0.4 465,971 + HP15_460 0.37 -0.9 466,424 - HP15_460 0.74 +0.5 466,488 - HP15_460 0.79 -0.0 466,489 - HP15_460 0.80 -0.2 466,500 + HP15_460 0.80 -1.9 466,513 - HP15_460 0.82 +0.1 467,084 + HP15_461 0.52 +0.8 467,448 + -0.4 467,456 - -0.9 467,572 - +2.1 467,590 + +0.4 467,598 - -0.1
Or see this region's nucleotide sequence