Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_971 and HP15_972 are separated by 191 nucleotides HP15_972 and HP15_973 are separated by 204 nucleotides HP15_973 and HP15_974 are separated by 99 nucleotides
HP15_971: HP15_971 - NIPSNAP family containing protein, at 983,132 to 983,437
_971
HP15_972: HP15_972 - hypothetical protein, at 983,629 to 984,114
_972
HP15_973: HP15_973 - conserved hypothetical protein, at 984,319 to 984,501
_973
HP15_974: HP15_974 - hypothetical protein, at 984,601 to 984,933
_974
Position (kb) 984
985 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 983.326 kb on - strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.393 kb on + strand, within HP15_971 at 983.400 kb on + strand, within HP15_971 at 983.403 kb on - strand, within HP15_971 at 983.472 kb on - strand at 983.491 kb on + strand at 983.504 kb on + strand at 983.530 kb on - strand at 983.657 kb on - strand at 983.709 kb on - strand, within HP15_972 at 983.721 kb on - strand, within HP15_972 at 983.871 kb on + strand, within HP15_972 at 984.040 kb on + strand, within HP15_972 at 984.047 kb on + strand, within HP15_972 at 984.239 kb on - strand at 984.295 kb on + strand at 984.295 kb on - strand at 984.481 kb on - strand, within HP15_973 at 984.481 kb on - strand, within HP15_973 at 984.517 kb on + strand at 984.532 kb on - strand at 984.651 kb on - strand, within HP15_974 at 984.734 kb on + strand, within HP15_974 at 984.787 kb on + strand, within HP15_974 at 984.952 kb on + strand at 984.990 kb on + strand at 985.055 kb on + strand at 985.063 kb on - strand at 985.132 kb on + strand at 985.132 kb on + strand at 985.132 kb on + strand at 985.151 kb on - strand at 985.178 kb on - strand at 985.255 kb on - strand at 985.363 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 983,326 - HP15_971 0.63 -0.3 983,393 + HP15_971 0.85 -0.7 983,393 + HP15_971 0.85 -0.7 983,393 + HP15_971 0.85 -2.0 983,393 + HP15_971 0.85 -0.7 983,400 + HP15_971 0.88 -0.1 983,403 - HP15_971 0.89 -0.5 983,472 - +1.2 983,491 + +0.3 983,504 + -1.2 983,530 - -1.4 983,657 - -0.9 983,709 - HP15_972 0.16 +0.2 983,721 - HP15_972 0.19 +0.0 983,871 + HP15_972 0.50 +0.2 984,040 + HP15_972 0.85 -0.0 984,047 + HP15_972 0.86 -0.1 984,239 - +0.4 984,295 + -2.1 984,295 - -1.4 984,481 - HP15_973 0.89 -1.6 984,481 - HP15_973 0.89 -0.5 984,517 + -1.2 984,532 - +0.9 984,651 - HP15_974 0.15 +1.2 984,734 + HP15_974 0.40 +0.0 984,787 + HP15_974 0.56 -0.1 984,952 + -0.4 984,990 + -0.6 985,055 + +0.3 985,063 - +2.2 985,132 + +0.0 985,132 + +0.5 985,132 + +0.5 985,151 - -0.4 985,178 - +3.2 985,255 - -0.4 985,363 + +0.2
Or see this region's nucleotide sequence