Experiment: L-Glutamic (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0498 and Psest_0499 are separated by 123 nucleotides Psest_0499 and Psest_0500 are separated by 28 nucleotides Psest_0500 and Psest_0501 are separated by 186 nucleotides
Psest_0498: Psest_0498 - ribosome small subunit-dependent GTPase A, at 552,927 to 553,958
_0498
Psest_0499: Psest_0499 - hypothetical protein, at 554,082 to 554,888
_0499
Psest_0500: Psest_0500 - Oligoribonuclease (3'->5' exoribonuclease), at 554,917 to 555,459
_0500
Psest_0501: Psest_0501 - Predicted nucleoside-diphosphate-sugar epimerases, at 555,646 to 556,287
_0501
Position (kb) 554
555 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 553.209 kb on - strand, within Psest_0498 at 553.396 kb on + strand, within Psest_0498 at 553.411 kb on + strand, within Psest_0498 at 553.963 kb on + strand at 553.963 kb on + strand at 553.964 kb on - strand at 553.964 kb on - strand at 553.993 kb on + strand at 553.993 kb on + strand at 553.993 kb on + strand at 553.993 kb on + strand at 553.993 kb on + strand at 553.994 kb on - strand at 554.046 kb on + strand at 554.046 kb on + strand at 554.047 kb on - strand at 554.047 kb on - strand at 554.047 kb on - strand at 554.099 kb on + strand at 554.137 kb on + strand at 554.415 kb on + strand, within Psest_0499 at 554.415 kb on + strand, within Psest_0499 at 554.415 kb on + strand, within Psest_0499 at 554.416 kb on - strand, within Psest_0499 at 554.416 kb on - strand, within Psest_0499 at 554.416 kb on - strand, within Psest_0499 at 554.668 kb on - strand, within Psest_0499 at 554.668 kb on - strand, within Psest_0499 at 554.680 kb on - strand, within Psest_0499 at 554.680 kb on - strand, within Psest_0499 at 554.680 kb on - strand, within Psest_0499 at 555.290 kb on - strand, within Psest_0500 at 555.290 kb on - strand, within Psest_0500 at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.541 kb on + strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.542 kb on - strand at 555.560 kb on + strand at 555.560 kb on + strand at 555.560 kb on + strand at 555.560 kb on + strand at 555.561 kb on - strand at 555.561 kb on - strand at 555.561 kb on - strand at 555.758 kb on + strand, within Psest_0501 at 555.758 kb on + strand, within Psest_0501 at 555.759 kb on - strand, within Psest_0501
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamic (N) remove 553,209 - Psest_0498 0.27 -0.8 553,396 + Psest_0498 0.45 -1.4 553,411 + Psest_0498 0.47 -0.5 553,963 + -0.5 553,963 + -0.2 553,964 - +1.2 553,964 - -0.4 553,993 + -2.3 553,993 + -0.1 553,993 + -0.9 553,993 + -0.2 553,993 + +0.5 553,994 - -2.9 554,046 + +2.0 554,046 + +0.5 554,047 - -0.3 554,047 - +0.7 554,047 - +0.1 554,099 + -0.3 554,137 + -0.5 554,415 + Psest_0499 0.41 -0.3 554,415 + Psest_0499 0.41 -1.1 554,415 + Psest_0499 0.41 -2.4 554,416 - Psest_0499 0.41 -0.3 554,416 - Psest_0499 0.41 -1.2 554,416 - Psest_0499 0.41 -0.8 554,668 - Psest_0499 0.73 -0.2 554,668 - Psest_0499 0.73 -0.7 554,680 - Psest_0499 0.74 -0.7 554,680 - Psest_0499 0.74 -1.6 554,680 - Psest_0499 0.74 +0.0 555,290 - Psest_0500 0.69 -1.4 555,290 - Psest_0500 0.69 -1.0 555,541 + +0.1 555,541 + +0.1 555,541 + +0.7 555,541 + -0.7 555,541 + +0.5 555,541 + +0.6 555,541 + +0.5 555,541 + -0.7 555,541 + -0.4 555,542 - +0.4 555,542 - +0.4 555,542 - +0.2 555,542 - -0.8 555,542 - +1.2 555,542 - -0.7 555,542 - -0.5 555,560 + -2.7 555,560 + +0.6 555,560 + +0.9 555,560 + -1.4 555,561 - -0.6 555,561 - -1.1 555,561 - +1.1 555,758 + Psest_0501 0.17 -0.9 555,758 + Psest_0501 0.17 -0.4 555,759 - Psest_0501 0.18 +0.9
Or see this region's nucleotide sequence