Strain Fitness in Marinobacter adhaerens HP15 around HP15_4137

Experiment: m.b. Paraquat dichloride 0.0075 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4136 and HP15_4137 are separated by 38 nucleotidesHP15_4137 and HP15_4138 are separated by 10 nucleotides HP15_4136: HP15_4136 - periplasmic molybdate-binding protein/domain protein, at 4,369,560 to 4,370,474 _4136 HP15_4137: HP15_4137 - sulphate transporter-like protein, at 4,370,513 to 4,371,643 _4137 HP15_4138: HP15_4138 - alkylglycerone-phosphate synthase, at 4,371,654 to 4,373,348 _4138 Position (kb) 4370 4371 4372Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4369.663 kb on - strand, within HP15_4136at 4369.664 kb on - strand, within HP15_4136at 4369.678 kb on + strand, within HP15_4136at 4369.680 kb on + strand, within HP15_4136at 4369.686 kb on - strand, within HP15_4136at 4369.716 kb on - strand, within HP15_4136at 4369.753 kb on + strand, within HP15_4136at 4369.775 kb on - strand, within HP15_4136at 4369.828 kb on - strand, within HP15_4136at 4369.846 kb on + strand, within HP15_4136at 4369.879 kb on + strand, within HP15_4136at 4369.927 kb on - strand, within HP15_4136at 4369.971 kb on + strand, within HP15_4136at 4370.039 kb on - strand, within HP15_4136at 4370.078 kb on - strand, within HP15_4136at 4370.081 kb on - strand, within HP15_4136at 4370.186 kb on + strand, within HP15_4136at 4370.194 kb on - strand, within HP15_4136at 4370.194 kb on - strand, within HP15_4136at 4370.300 kb on - strand, within HP15_4136at 4370.307 kb on - strand, within HP15_4136at 4370.455 kb on - strandat 4370.465 kb on - strandat 4370.506 kb on + strandat 4370.511 kb on + strandat 4370.566 kb on + strandat 4370.597 kb on - strandat 4370.650 kb on + strand, within HP15_4137at 4370.658 kb on - strand, within HP15_4137at 4370.671 kb on + strand, within HP15_4137at 4370.684 kb on - strand, within HP15_4137at 4370.707 kb on + strand, within HP15_4137at 4370.740 kb on - strand, within HP15_4137at 4370.740 kb on - strand, within HP15_4137at 4370.768 kb on + strand, within HP15_4137at 4370.768 kb on + strand, within HP15_4137at 4370.776 kb on - strand, within HP15_4137at 4370.846 kb on + strand, within HP15_4137at 4371.484 kb on + strand, within HP15_4137at 4371.492 kb on - strand, within HP15_4137at 4371.492 kb on - strand, within HP15_4137at 4371.584 kb on - strandat 4371.592 kb on + strandat 4371.592 kb on + strandat 4371.600 kb on - strandat 4371.610 kb on - strandat 4371.619 kb on + strandat 4371.627 kb on - strandat 4371.841 kb on - strand, within HP15_4138at 4371.885 kb on - strand, within HP15_4138at 4371.956 kb on + strand, within HP15_4138at 4371.956 kb on + strand, within HP15_4138at 4371.978 kb on - strand, within HP15_4138at 4372.030 kb on - strand, within HP15_4138at 4372.062 kb on - strand, within HP15_4138at 4372.330 kb on + strand, within HP15_4138at 4372.338 kb on - strand, within HP15_4138at 4372.372 kb on - strand, within HP15_4138at 4372.412 kb on - strand, within HP15_4138at 4372.538 kb on - strand, within HP15_4138at 4372.609 kb on - strand, within HP15_4138

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml
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4,369,663 - HP15_4136 0.11 -1.5
4,369,664 - HP15_4136 0.11 -0.7
4,369,678 + HP15_4136 0.13 +1.7
4,369,680 + HP15_4136 0.13 -0.2
4,369,686 - HP15_4136 0.14 -0.4
4,369,716 - HP15_4136 0.17 -1.4
4,369,753 + HP15_4136 0.21 -0.1
4,369,775 - HP15_4136 0.23 -1.2
4,369,828 - HP15_4136 0.29 +0.7
4,369,846 + HP15_4136 0.31 +1.2
4,369,879 + HP15_4136 0.35 +0.1
4,369,927 - HP15_4136 0.40 -0.1
4,369,971 + HP15_4136 0.45 +0.5
4,370,039 - HP15_4136 0.52 -0.3
4,370,078 - HP15_4136 0.57 -1.4
4,370,081 - HP15_4136 0.57 +0.8
4,370,186 + HP15_4136 0.68 +1.0
4,370,194 - HP15_4136 0.69 -0.6
4,370,194 - HP15_4136 0.69 +1.6
4,370,300 - HP15_4136 0.81 +0.7
4,370,307 - HP15_4136 0.82 -1.2
4,370,455 - -0.8
4,370,465 - -1.1
4,370,506 + +0.4
4,370,511 + -0.0
4,370,566 + +0.3
4,370,597 - +0.7
4,370,650 + HP15_4137 0.12 -2.0
4,370,658 - HP15_4137 0.13 -1.1
4,370,671 + HP15_4137 0.14 -0.8
4,370,684 - HP15_4137 0.15 +0.3
4,370,707 + HP15_4137 0.17 -0.4
4,370,740 - HP15_4137 0.20 -0.2
4,370,740 - HP15_4137 0.20 -1.1
4,370,768 + HP15_4137 0.23 +0.3
4,370,768 + HP15_4137 0.23 +0.2
4,370,776 - HP15_4137 0.23 +0.4
4,370,846 + HP15_4137 0.29 -2.5
4,371,484 + HP15_4137 0.86 +0.1
4,371,492 - HP15_4137 0.87 -1.2
4,371,492 - HP15_4137 0.87 -0.2
4,371,584 - +1.5
4,371,592 + +0.5
4,371,592 + -0.5
4,371,600 - +0.3
4,371,610 - +1.4
4,371,619 + +0.3
4,371,627 - -0.6
4,371,841 - HP15_4138 0.11 +0.3
4,371,885 - HP15_4138 0.14 -0.4
4,371,956 + HP15_4138 0.18 -0.3
4,371,956 + HP15_4138 0.18 +0.5
4,371,978 - HP15_4138 0.19 +0.7
4,372,030 - HP15_4138 0.22 +0.0
4,372,062 - HP15_4138 0.24 +0.7
4,372,330 + HP15_4138 0.40 +0.5
4,372,338 - HP15_4138 0.40 -0.2
4,372,372 - HP15_4138 0.42 +0.0
4,372,412 - HP15_4138 0.45 +1.4
4,372,538 - HP15_4138 0.52 -1.8
4,372,609 - HP15_4138 0.56 +3.5

Or see this region's nucleotide sequence