Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3804 and HP15_3805 are separated by 10 nucleotides HP15_3805 and HP15_3806 are separated by 196 nucleotides HP15_3806 and HP15_3807 overlap by 4 nucleotides
HP15_3804: HP15_3804 - esterase, at 4,029,964 to 4,031,250
_3804
HP15_3805: HP15_3805 - conserved hypothetical protein, at 4,031,261 to 4,031,605
_3805
HP15_3806: HP15_3806 - conserved hypothetical protein, at 4,031,802 to 4,032,053
_3806
HP15_3807: HP15_3807 - conserved hypothetical protein, secreted, at 4,032,050 to 4,033,120
_3807
Position (kb)
4031
4032 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 4030.337 kb on + strand, within HP15_3804 at 4030.497 kb on + strand, within HP15_3804 at 4030.505 kb on - strand, within HP15_3804 at 4030.537 kb on - strand, within HP15_3804 at 4030.590 kb on + strand, within HP15_3804 at 4030.673 kb on + strand, within HP15_3804 at 4030.717 kb on - strand, within HP15_3804 at 4030.744 kb on + strand, within HP15_3804 at 4030.950 kb on - strand, within HP15_3804 at 4031.019 kb on - strand, within HP15_3804 at 4031.059 kb on - strand, within HP15_3804 at 4031.091 kb on + strand, within HP15_3804 at 4031.091 kb on + strand, within HP15_3804 at 4031.116 kb on + strand, within HP15_3804 at 4031.175 kb on + strand at 4031.259 kb on + strand at 4031.267 kb on - strand at 4031.268 kb on + strand at 4031.276 kb on - strand at 4031.286 kb on + strand at 4031.291 kb on + strand at 4031.303 kb on + strand, within HP15_3805 at 4031.303 kb on + strand, within HP15_3805 at 4031.352 kb on - strand, within HP15_3805 at 4031.352 kb on - strand, within HP15_3805 at 4031.379 kb on + strand, within HP15_3805 at 4031.382 kb on - strand, within HP15_3805 at 4031.393 kb on - strand, within HP15_3805 at 4031.467 kb on + strand, within HP15_3805 at 4031.467 kb on + strand, within HP15_3805 at 4031.512 kb on + strand, within HP15_3805 at 4031.654 kb on - strand at 4031.678 kb on - strand at 4032.022 kb on + strand, within HP15_3806 at 4032.022 kb on + strand, within HP15_3806 at 4032.088 kb on - strand at 4032.263 kb on + strand, within HP15_3807 at 4032.293 kb on - strand, within HP15_3807 at 4032.303 kb on - strand, within HP15_3807 at 4032.358 kb on + strand, within HP15_3807
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 4,030,337 + HP15_3804 0.29 -1.4 4,030,497 + HP15_3804 0.41 +1.0 4,030,505 - HP15_3804 0.42 +4.6 4,030,537 - HP15_3804 0.45 +0.0 4,030,590 + HP15_3804 0.49 -0.1 4,030,673 + HP15_3804 0.55 -0.5 4,030,717 - HP15_3804 0.59 +0.8 4,030,744 + HP15_3804 0.61 -0.8 4,030,950 - HP15_3804 0.77 -0.2 4,031,019 - HP15_3804 0.82 -0.6 4,031,059 - HP15_3804 0.85 -0.4 4,031,091 + HP15_3804 0.88 +1.6 4,031,091 + HP15_3804 0.88 -1.6 4,031,116 + HP15_3804 0.90 +0.1 4,031,175 + -0.5 4,031,259 + -0.3 4,031,267 - +0.7 4,031,268 + -0.3 4,031,276 - -0.5 4,031,286 + -1.0 4,031,291 + +1.9 4,031,303 + HP15_3805 0.12 -0.4 4,031,303 + HP15_3805 0.12 +1.7 4,031,352 - HP15_3805 0.26 -1.1 4,031,352 - HP15_3805 0.26 +1.1 4,031,379 + HP15_3805 0.34 +2.4 4,031,382 - HP15_3805 0.35 +2.1 4,031,393 - HP15_3805 0.38 +0.7 4,031,467 + HP15_3805 0.60 +0.3 4,031,467 + HP15_3805 0.60 +0.3 4,031,512 + HP15_3805 0.73 -0.1 4,031,654 - -0.3 4,031,678 - +1.1 4,032,022 + HP15_3806 0.87 +2.3 4,032,022 + HP15_3806 0.87 +0.5 4,032,088 - -0.3 4,032,263 + HP15_3807 0.20 +1.4 4,032,293 - HP15_3807 0.23 +0.4 4,032,303 - HP15_3807 0.24 -0.4 4,032,358 + HP15_3807 0.29 -1.0
Or see this region's nucleotide sequence