Strain Fitness in Marinobacter adhaerens HP15 around HP15_3016
Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.0075 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,160,259 | + | HP15_3015 | 0.17 | -0.7 | |
3,160,312 | - | HP15_3015 | 0.22 | -0.8 | |
3,160,431 | + | HP15_3015 | 0.33 | +0.9 | |
3,160,460 | - | HP15_3015 | 0.36 | -1.1 | |
3,160,494 | + | HP15_3015 | 0.39 | -0.7 | |
3,160,597 | - | HP15_3015 | 0.49 | +0.0 | |
3,160,610 | + | HP15_3015 | 0.50 | +1.2 | |
3,160,618 | - | HP15_3015 | 0.51 | -0.3 | |
3,160,711 | - | HP15_3015 | 0.59 | +1.3 | |
3,160,728 | - | HP15_3015 | 0.61 | -1.4 | |
3,160,730 | + | HP15_3015 | 0.61 | +0.3 | |
3,160,883 | + | HP15_3015 | 0.75 | -1.5 | |
3,160,997 | - | HP15_3015 | 0.86 | +3.5 | |
3,160,997 | - | HP15_3015 | 0.86 | -0.1 | |
3,161,142 | - | -0.9 | |||
3,161,266 | + | HP15_3016 | 0.16 | +2.6 | |
3,161,274 | - | HP15_3016 | 0.19 | +1.0 | |
3,161,281 | + | HP15_3016 | 0.22 | +1.9 | |
3,161,299 | + | HP15_3016 | 0.29 | +0.3 | |
3,161,398 | - | HP15_3016 | 0.65 | +4.5 | |
3,161,460 | - | HP15_3016 | 0.88 | +0.9 | |
3,161,511 | - | +2.5 | |||
3,161,753 | - | -2.2 | |||
3,161,797 | - | +1.2 | |||
3,161,899 | + | -0.0 | |||
3,161,982 | + | -0.3 | |||
3,162,086 | - | -0.0 | |||
3,162,236 | - | +0.1 | |||
3,162,236 | - | -1.9 | |||
3,162,247 | + | +3.5 | |||
3,162,416 | - | +1.7 |
Or see this region's nucleotide sequence