Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_301 and HP15_302 are separated by 21 nucleotides HP15_302 and HP15_303 are separated by 148 nucleotides HP15_303 and HP15_304 are separated by 86 nucleotides
HP15_301: HP15_301 - conserved hypothetical protein, at 291,999 to 292,865
_301
HP15_302: HP15_302 - protein containing pseudouridine synthase domain, at 292,887 to 293,708
_302
HP15_303: HP15_303 - guanylate kinase, at 293,857 to 294,489
_303
HP15_304: HP15_304 - DNA-directed RNA polymerase subunit omega, at 294,576 to 294,788
_304
Position (kb) 292
293
294 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 291.918 kb on - strand at 291.955 kb on - strand at 291.955 kb on - strand at 291.955 kb on - strand at 291.991 kb on + strand at 291.999 kb on - strand at 292.034 kb on + strand at 292.042 kb on - strand at 292.053 kb on + strand at 292.056 kb on - strand at 292.061 kb on - strand at 292.061 kb on - strand at 292.075 kb on - strand at 292.182 kb on + strand, within HP15_301 at 292.213 kb on + strand, within HP15_301 at 292.310 kb on + strand, within HP15_301 at 292.325 kb on - strand, within HP15_301 at 292.373 kb on - strand, within HP15_301 at 292.373 kb on - strand, within HP15_301 at 292.373 kb on - strand, within HP15_301 at 292.375 kb on + strand, within HP15_301 at 292.511 kb on + strand, within HP15_301 at 292.532 kb on - strand, within HP15_301 at 292.605 kb on + strand, within HP15_301 at 292.613 kb on - strand, within HP15_301 at 292.613 kb on - strand, within HP15_301 at 292.807 kb on - strand at 292.903 kb on - strand at 292.939 kb on + strand at 292.944 kb on + strand at 292.944 kb on + strand at 292.944 kb on + strand at 292.952 kb on - strand at 292.983 kb on + strand, within HP15_302 at 293.116 kb on + strand, within HP15_302 at 293.134 kb on - strand, within HP15_302 at 293.233 kb on + strand, within HP15_302 at 293.266 kb on - strand, within HP15_302 at 293.317 kb on + strand, within HP15_302 at 293.425 kb on + strand, within HP15_302 at 293.440 kb on + strand, within HP15_302 at 293.440 kb on + strand, within HP15_302 at 293.448 kb on - strand, within HP15_302 at 293.448 kb on - strand, within HP15_302 at 293.553 kb on + strand, within HP15_302 at 293.664 kb on + strand at 293.678 kb on + strand at 293.734 kb on - strand at 293.745 kb on - strand at 293.759 kb on + strand at 293.759 kb on + strand at 293.759 kb on + strand at 293.760 kb on - strand at 293.767 kb on - strand at 293.769 kb on - strand at 293.769 kb on - strand at 293.838 kb on + strand at 293.838 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 291,918 - -2.3 291,955 - -0.7 291,955 - +0.6 291,955 - -2.4 291,991 + -1.2 291,999 - +0.2 292,034 + -0.1 292,042 - +3.4 292,053 + +0.4 292,056 - +0.7 292,061 - +0.2 292,061 - +1.1 292,075 - +0.0 292,182 + HP15_301 0.21 -0.8 292,213 + HP15_301 0.25 -0.3 292,310 + HP15_301 0.36 -0.2 292,325 - HP15_301 0.38 +2.1 292,373 - HP15_301 0.43 -0.7 292,373 - HP15_301 0.43 -2.3 292,373 - HP15_301 0.43 -0.1 292,375 + HP15_301 0.43 -1.4 292,511 + HP15_301 0.59 -0.7 292,532 - HP15_301 0.61 +0.8 292,605 + HP15_301 0.70 -0.1 292,613 - HP15_301 0.71 -0.9 292,613 - HP15_301 0.71 +1.3 292,807 - -2.2 292,903 - +0.9 292,939 + -0.4 292,944 + -0.0 292,944 + -0.0 292,944 + -0.7 292,952 - +1.2 292,983 + HP15_302 0.12 -0.6 293,116 + HP15_302 0.28 +0.6 293,134 - HP15_302 0.30 -0.6 293,233 + HP15_302 0.42 +0.7 293,266 - HP15_302 0.46 +0.4 293,317 + HP15_302 0.52 -1.6 293,425 + HP15_302 0.65 -0.6 293,440 + HP15_302 0.67 +0.9 293,440 + HP15_302 0.67 +1.9 293,448 - HP15_302 0.68 -0.3 293,448 - HP15_302 0.68 -0.3 293,553 + HP15_302 0.81 +0.9 293,664 + +0.8 293,678 + +1.1 293,734 - -0.8 293,745 - -0.8 293,759 + +0.2 293,759 + -0.9 293,759 + -0.9 293,760 - +1.4 293,767 - -0.3 293,769 - +0.4 293,769 - +0.3 293,838 + +2.0 293,838 + -0.4
Or see this region's nucleotide sequence