Strain Fitness in Marinobacter adhaerens HP15 around HP15_2629
Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Paraquat dichloride 0.0075 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,779,935 | + | HP15_2628 | 0.52 | -0.6 | |
2,779,943 | - | HP15_2628 | 0.53 | +1.7 | |
2,780,019 | - | HP15_2628 | 0.58 | +1.9 | |
2,780,230 | + | HP15_2628 | 0.71 | -0.7 | |
2,780,444 | - | HP15_2628 | 0.85 | -2.3 | |
2,780,472 | - | HP15_2628 | 0.86 | +1.9 | |
2,780,518 | - | HP15_2628 | 0.89 | +1.4 | |
2,780,590 | + | +1.5 | |||
2,780,754 | - | +0.5 | |||
2,780,766 | + | -0.8 | |||
2,780,802 | + | -0.6 | |||
2,780,812 | + | +1.2 | |||
2,780,848 | - | -0.1 | |||
2,780,868 | + | -0.5 | |||
2,781,013 | + | HP15_2629 | 0.52 | -2.2 | |
2,781,031 | - | HP15_2629 | 0.58 | -1.8 | |
2,781,124 | - | +0.4 | |||
2,781,276 | - | +0.6 | |||
2,781,278 | + | -2.2 | |||
2,781,278 | + | +0.6 | |||
2,781,298 | - | -0.2 | |||
2,781,299 | + | +0.7 | |||
2,781,408 | + | -0.1 | |||
2,781,502 | + | HP15_2630 | 0.17 | +0.0 | |
2,781,732 | + | HP15_2630 | 0.49 | -0.7 | |
2,781,756 | + | HP15_2630 | 0.53 | -0.7 | |
2,781,813 | + | HP15_2630 | 0.61 | -0.4 | |
2,781,813 | + | HP15_2630 | 0.61 | +0.5 | |
2,781,821 | - | HP15_2630 | 0.62 | -1.5 | |
2,781,821 | - | HP15_2630 | 0.62 | +0.5 | |
2,781,821 | - | HP15_2630 | 0.62 | -1.5 | |
2,781,850 | - | HP15_2630 | 0.66 | +0.2 | |
2,781,883 | - | HP15_2630 | 0.71 | +0.5 | |
2,781,941 | + | HP15_2630 | 0.79 | +1.8 |
Or see this region's nucleotide sequence