Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2624 and HP15_2625 are separated by 7 nucleotides HP15_2625 and HP15_2626 are separated by 15 nucleotides HP15_2626 and HP15_2627 are separated by 4 nucleotides
HP15_2624: HP15_2624 - sodium-dependent transporter family protein, at 2,775,275 to 2,776,687
_2624
HP15_2625: HP15_2625 - silent information regulator protein Sir2, at 2,776,695 to 2,777,597
_2625
HP15_2626: HP15_2626 - conserved hypothetical protein, at 2,777,613 to 2,778,344
_2626
HP15_2627: HP15_2627 - protein containing DUF1415, at 2,778,349 to 2,778,909
_2627
Position (kb)
2776
2777
2778 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2775.785 kb on + strand, within HP15_2624 at 2775.872 kb on - strand, within HP15_2624 at 2775.930 kb on - strand, within HP15_2624 at 2775.995 kb on - strand, within HP15_2624 at 2776.021 kb on - strand, within HP15_2624 at 2776.103 kb on - strand, within HP15_2624 at 2776.126 kb on + strand, within HP15_2624 at 2776.167 kb on + strand, within HP15_2624 at 2776.175 kb on - strand, within HP15_2624 at 2776.268 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.326 kb on + strand, within HP15_2624 at 2776.351 kb on - strand, within HP15_2624 at 2776.351 kb on - strand, within HP15_2624 at 2776.391 kb on + strand, within HP15_2624 at 2776.391 kb on + strand, within HP15_2624 at 2776.519 kb on + strand, within HP15_2624 at 2776.591 kb on + strand at 2776.637 kb on - strand at 2776.664 kb on + strand at 2776.701 kb on - strand at 2776.907 kb on - strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.073 kb on + strand, within HP15_2625 at 2777.081 kb on - strand, within HP15_2625 at 2777.139 kb on - strand, within HP15_2625 at 2777.171 kb on + strand, within HP15_2625 at 2777.227 kb on - strand, within HP15_2625 at 2777.241 kb on - strand, within HP15_2625 at 2777.273 kb on + strand, within HP15_2625 at 2777.297 kb on - strand, within HP15_2625 at 2777.359 kb on + strand, within HP15_2625 at 2777.431 kb on + strand, within HP15_2625 at 2777.438 kb on + strand, within HP15_2625 at 2777.439 kb on - strand, within HP15_2625 at 2777.446 kb on - strand, within HP15_2625 at 2777.703 kb on + strand, within HP15_2626 at 2777.703 kb on + strand, within HP15_2626 at 2777.714 kb on - strand, within HP15_2626 at 2778.106 kb on + strand, within HP15_2626 at 2778.111 kb on + strand, within HP15_2626 at 2778.165 kb on - strand, within HP15_2626 at 2778.345 kb on - strand at 2778.347 kb on + strand at 2778.347 kb on + strand at 2778.347 kb on + strand at 2778.355 kb on - strand at 2778.355 kb on - strand at 2778.392 kb on - strand at 2778.434 kb on - strand, within HP15_2627
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 2,775,785 + HP15_2624 0.36 -0.4 2,775,872 - HP15_2624 0.42 +0.2 2,775,930 - HP15_2624 0.46 +0.5 2,775,995 - HP15_2624 0.51 +0.6 2,776,021 - HP15_2624 0.53 +1.1 2,776,103 - HP15_2624 0.59 -0.6 2,776,126 + HP15_2624 0.60 +0.3 2,776,167 + HP15_2624 0.63 -2.7 2,776,175 - HP15_2624 0.64 -0.3 2,776,268 + HP15_2624 0.70 -0.7 2,776,326 + HP15_2624 0.74 +0.1 2,776,326 + HP15_2624 0.74 +0.6 2,776,326 + HP15_2624 0.74 -0.2 2,776,326 + HP15_2624 0.74 -1.3 2,776,351 - HP15_2624 0.76 +1.0 2,776,351 - HP15_2624 0.76 -0.9 2,776,391 + HP15_2624 0.79 +0.4 2,776,391 + HP15_2624 0.79 -0.3 2,776,519 + HP15_2624 0.88 +1.3 2,776,591 + -0.7 2,776,637 - -0.3 2,776,664 + +0.9 2,776,701 - -0.0 2,776,907 - HP15_2625 0.23 -2.2 2,777,073 + HP15_2625 0.42 -0.4 2,777,073 + HP15_2625 0.42 -3.5 2,777,073 + HP15_2625 0.42 -3.4 2,777,081 - HP15_2625 0.43 +0.1 2,777,139 - HP15_2625 0.49 -1.6 2,777,171 + HP15_2625 0.53 -0.2 2,777,227 - HP15_2625 0.59 -0.4 2,777,241 - HP15_2625 0.60 -0.2 2,777,273 + HP15_2625 0.64 -0.7 2,777,297 - HP15_2625 0.67 +0.4 2,777,359 + HP15_2625 0.74 -0.7 2,777,431 + HP15_2625 0.82 -0.3 2,777,438 + HP15_2625 0.82 +0.3 2,777,439 - HP15_2625 0.82 +0.1 2,777,446 - HP15_2625 0.83 +0.4 2,777,703 + HP15_2626 0.12 -0.1 2,777,703 + HP15_2626 0.12 +0.3 2,777,714 - HP15_2626 0.14 -0.4 2,778,106 + HP15_2626 0.67 -0.5 2,778,111 + HP15_2626 0.68 -0.2 2,778,165 - HP15_2626 0.75 +0.0 2,778,345 - -0.3 2,778,347 + +1.7 2,778,347 + +1.9 2,778,347 + -1.8 2,778,355 - -0.2 2,778,355 - -0.2 2,778,392 - -1.3 2,778,434 - HP15_2627 0.15 -0.1
Or see this region's nucleotide sequence