Strain Fitness in Marinobacter adhaerens HP15 around HP15_2316

Experiment: m.b. Paraquat dichloride 0.0075 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2315 and HP15_2316 are separated by 36 nucleotidesHP15_2316 and HP15_2317 are separated by 165 nucleotides HP15_2315: HP15_2315 - flagellar motor switch protein FliM-like protein, at 2,435,524 to 2,436,522 _2315 HP15_2316: HP15_2316 - flagellar basal body-associated protein FliL, at 2,436,559 to 2,437,068 _2316 HP15_2317: HP15_2317 - flagellar hook-length control protein, at 2,437,234 to 2,438,424 _2317 Position (kb) 2436 2437 2438Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2435.627 kb on - strand, within HP15_2315at 2435.750 kb on - strand, within HP15_2315at 2435.768 kb on + strand, within HP15_2315at 2435.769 kb on + strand, within HP15_2315at 2435.878 kb on - strand, within HP15_2315at 2436.063 kb on - strand, within HP15_2315at 2436.219 kb on + strand, within HP15_2315at 2436.237 kb on + strand, within HP15_2315at 2436.237 kb on + strand, within HP15_2315at 2436.363 kb on + strand, within HP15_2315at 2436.444 kb on + strandat 2436.452 kb on - strandat 2436.478 kb on + strandat 2436.484 kb on - strandat 2436.531 kb on - strandat 2436.544 kb on + strandat 2436.559 kb on + strandat 2436.651 kb on + strand, within HP15_2316at 2436.703 kb on + strand, within HP15_2316at 2436.737 kb on + strand, within HP15_2316at 2436.791 kb on + strand, within HP15_2316at 2436.858 kb on + strand, within HP15_2316at 2436.866 kb on - strand, within HP15_2316at 2436.970 kb on - strand, within HP15_2316at 2437.277 kb on - strandat 2437.277 kb on - strandat 2437.406 kb on - strand, within HP15_2317at 2437.439 kb on + strand, within HP15_2317at 2437.531 kb on + strand, within HP15_2317at 2437.535 kb on - strand, within HP15_2317at 2437.615 kb on - strand, within HP15_2317at 2437.626 kb on + strand, within HP15_2317at 2437.641 kb on + strand, within HP15_2317at 2437.671 kb on + strand, within HP15_2317at 2437.696 kb on + strand, within HP15_2317at 2437.789 kb on - strand, within HP15_2317at 2437.827 kb on + strand, within HP15_2317at 2437.872 kb on - strand, within HP15_2317at 2437.880 kb on + strand, within HP15_2317at 2437.963 kb on + strand, within HP15_2317at 2438.016 kb on + strand, within HP15_2317

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml
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2,435,627 - HP15_2315 0.10 +1.4
2,435,750 - HP15_2315 0.23 -0.4
2,435,768 + HP15_2315 0.24 -1.1
2,435,769 + HP15_2315 0.25 +2.2
2,435,878 - HP15_2315 0.35 +1.2
2,436,063 - HP15_2315 0.54 +0.3
2,436,219 + HP15_2315 0.70 -1.1
2,436,237 + HP15_2315 0.71 +0.0
2,436,237 + HP15_2315 0.71 +0.3
2,436,363 + HP15_2315 0.84 +0.2
2,436,444 + +0.4
2,436,452 - -0.4
2,436,478 + -1.3
2,436,484 - +1.9
2,436,531 - -3.7
2,436,544 + +0.2
2,436,559 + +1.1
2,436,651 + HP15_2316 0.18 +2.3
2,436,703 + HP15_2316 0.28 +1.5
2,436,737 + HP15_2316 0.35 +0.7
2,436,791 + HP15_2316 0.45 -0.6
2,436,858 + HP15_2316 0.59 -0.8
2,436,866 - HP15_2316 0.60 +0.9
2,436,970 - HP15_2316 0.81 +1.1
2,437,277 - -1.4
2,437,277 - -1.5
2,437,406 - HP15_2317 0.14 -1.9
2,437,439 + HP15_2317 0.17 -1.1
2,437,531 + HP15_2317 0.25 +0.2
2,437,535 - HP15_2317 0.25 +0.1
2,437,615 - HP15_2317 0.32 -0.6
2,437,626 + HP15_2317 0.33 -0.6
2,437,641 + HP15_2317 0.34 -0.6
2,437,671 + HP15_2317 0.37 -0.1
2,437,696 + HP15_2317 0.39 -0.5
2,437,789 - HP15_2317 0.47 -0.5
2,437,827 + HP15_2317 0.50 -0.6
2,437,872 - HP15_2317 0.54 -1.3
2,437,880 + HP15_2317 0.54 +0.2
2,437,963 + HP15_2317 0.61 -1.7
2,438,016 + HP15_2317 0.66 -1.1

Or see this region's nucleotide sequence