Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2315 and HP15_2316 are separated by 36 nucleotides HP15_2316 and HP15_2317 are separated by 165 nucleotides
HP15_2315: HP15_2315 - flagellar motor switch protein FliM-like protein, at 2,435,524 to 2,436,522
_2315
HP15_2316: HP15_2316 - flagellar basal body-associated protein FliL, at 2,436,559 to 2,437,068
_2316
HP15_2317: HP15_2317 - flagellar hook-length control protein, at 2,437,234 to 2,438,424
_2317
Position (kb)
2436
2437
2438 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2435.627 kb on - strand, within HP15_2315 at 2435.750 kb on - strand, within HP15_2315 at 2435.768 kb on + strand, within HP15_2315 at 2435.769 kb on + strand, within HP15_2315 at 2435.878 kb on - strand, within HP15_2315 at 2436.063 kb on - strand, within HP15_2315 at 2436.219 kb on + strand, within HP15_2315 at 2436.237 kb on + strand, within HP15_2315 at 2436.237 kb on + strand, within HP15_2315 at 2436.363 kb on + strand, within HP15_2315 at 2436.444 kb on + strand at 2436.452 kb on - strand at 2436.478 kb on + strand at 2436.484 kb on - strand at 2436.531 kb on - strand at 2436.544 kb on + strand at 2436.559 kb on + strand at 2436.651 kb on + strand, within HP15_2316 at 2436.703 kb on + strand, within HP15_2316 at 2436.737 kb on + strand, within HP15_2316 at 2436.791 kb on + strand, within HP15_2316 at 2436.858 kb on + strand, within HP15_2316 at 2436.866 kb on - strand, within HP15_2316 at 2436.970 kb on - strand, within HP15_2316 at 2437.277 kb on - strand at 2437.277 kb on - strand at 2437.406 kb on - strand, within HP15_2317 at 2437.439 kb on + strand, within HP15_2317 at 2437.531 kb on + strand, within HP15_2317 at 2437.535 kb on - strand, within HP15_2317 at 2437.615 kb on - strand, within HP15_2317 at 2437.626 kb on + strand, within HP15_2317 at 2437.641 kb on + strand, within HP15_2317 at 2437.671 kb on + strand, within HP15_2317 at 2437.696 kb on + strand, within HP15_2317 at 2437.789 kb on - strand, within HP15_2317 at 2437.827 kb on + strand, within HP15_2317 at 2437.872 kb on - strand, within HP15_2317 at 2437.880 kb on + strand, within HP15_2317 at 2437.963 kb on + strand, within HP15_2317 at 2438.016 kb on + strand, within HP15_2317
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 2,435,627 - HP15_2315 0.10 +1.4 2,435,750 - HP15_2315 0.23 -0.4 2,435,768 + HP15_2315 0.24 -1.1 2,435,769 + HP15_2315 0.25 +2.2 2,435,878 - HP15_2315 0.35 +1.2 2,436,063 - HP15_2315 0.54 +0.3 2,436,219 + HP15_2315 0.70 -1.1 2,436,237 + HP15_2315 0.71 +0.0 2,436,237 + HP15_2315 0.71 +0.3 2,436,363 + HP15_2315 0.84 +0.2 2,436,444 + +0.4 2,436,452 - -0.4 2,436,478 + -1.3 2,436,484 - +1.9 2,436,531 - -3.7 2,436,544 + +0.2 2,436,559 + +1.1 2,436,651 + HP15_2316 0.18 +2.3 2,436,703 + HP15_2316 0.28 +1.5 2,436,737 + HP15_2316 0.35 +0.7 2,436,791 + HP15_2316 0.45 -0.6 2,436,858 + HP15_2316 0.59 -0.8 2,436,866 - HP15_2316 0.60 +0.9 2,436,970 - HP15_2316 0.81 +1.1 2,437,277 - -1.4 2,437,277 - -1.5 2,437,406 - HP15_2317 0.14 -1.9 2,437,439 + HP15_2317 0.17 -1.1 2,437,531 + HP15_2317 0.25 +0.2 2,437,535 - HP15_2317 0.25 +0.1 2,437,615 - HP15_2317 0.32 -0.6 2,437,626 + HP15_2317 0.33 -0.6 2,437,641 + HP15_2317 0.34 -0.6 2,437,671 + HP15_2317 0.37 -0.1 2,437,696 + HP15_2317 0.39 -0.5 2,437,789 - HP15_2317 0.47 -0.5 2,437,827 + HP15_2317 0.50 -0.6 2,437,872 - HP15_2317 0.54 -1.3 2,437,880 + HP15_2317 0.54 +0.2 2,437,963 + HP15_2317 0.61 -1.7 2,438,016 + HP15_2317 0.66 -1.1
Or see this region's nucleotide sequence