Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1750 and HP15_1751 are separated by 57 nucleotides HP15_1751 and HP15_1752 are separated by 228 nucleotides HP15_1752 and HP15_1753 are separated by 28 nucleotides HP15_1753 and HP15_1754 are separated by 10 nucleotides
HP15_1750: HP15_1750 - saccharopine dehydrogenase-like protein, at 1,850,088 to 1,851,329
_1750
HP15_1751: HP15_1751 - conserved hypothetical protein, membrane, at 1,851,387 to 1,851,803
_1751
HP15_1752: HP15_1752 - conserved hypothetical protein, at 1,852,032 to 1,852,340
_1752
HP15_1753: HP15_1753 - conserved hypothetical protein, secreted, at 1,852,369 to 1,852,842
_1753
HP15_1754: HP15_1754 - rRNA (guanine-N1-)-methyltransferase A, predicted, at 1,852,853 to 1,853,638
_1754
Position (kb)
1852
1853 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1851.086 kb on - strand, within HP15_1750 at 1851.142 kb on + strand, within HP15_1750 at 1851.165 kb on + strand, within HP15_1750 at 1851.183 kb on - strand, within HP15_1750 at 1851.224 kb on + strand at 1851.232 kb on - strand at 1851.232 kb on - strand at 1851.483 kb on + strand, within HP15_1751 at 1851.640 kb on - strand, within HP15_1751 at 1851.658 kb on + strand, within HP15_1751 at 1851.658 kb on + strand, within HP15_1751 at 1851.713 kb on + strand, within HP15_1751 at 1851.764 kb on - strand at 1851.833 kb on + strand at 1851.960 kb on + strand at 1851.960 kb on + strand at 1851.968 kb on - strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.029 kb on + strand at 1852.037 kb on - strand at 1852.037 kb on - strand at 1852.078 kb on + strand, within HP15_1752 at 1852.078 kb on + strand, within HP15_1752 at 1852.078 kb on + strand, within HP15_1752 at 1852.103 kb on - strand, within HP15_1752 at 1852.180 kb on + strand, within HP15_1752 at 1852.212 kb on + strand, within HP15_1752 at 1852.504 kb on - strand, within HP15_1753 at 1852.522 kb on - strand, within HP15_1753 at 1852.656 kb on - strand, within HP15_1753 at 1852.693 kb on + strand, within HP15_1753 at 1852.815 kb on + strand at 1852.816 kb on + strand at 1852.823 kb on - strand at 1852.824 kb on - strand at 1852.871 kb on + strand at 1852.879 kb on - strand at 1852.907 kb on + strand at 1852.938 kb on - strand, within HP15_1754 at 1852.967 kb on - strand, within HP15_1754 at 1852.993 kb on - strand, within HP15_1754 at 1853.066 kb on + strand, within HP15_1754 at 1853.274 kb on + strand, within HP15_1754
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 1,851,086 - HP15_1750 0.80 -0.3 1,851,142 + HP15_1750 0.85 -1.3 1,851,165 + HP15_1750 0.87 -1.9 1,851,183 - HP15_1750 0.88 +0.4 1,851,224 + +2.8 1,851,232 - +0.2 1,851,232 - +0.9 1,851,483 + HP15_1751 0.23 +0.0 1,851,640 - HP15_1751 0.61 +1.2 1,851,658 + HP15_1751 0.65 +1.5 1,851,658 + HP15_1751 0.65 +1.2 1,851,713 + HP15_1751 0.78 -1.6 1,851,764 - +3.1 1,851,833 + -0.4 1,851,960 + +0.1 1,851,960 + -1.6 1,851,968 - -0.2 1,852,029 + -1.3 1,852,029 + -0.9 1,852,029 + -0.3 1,852,029 + -0.7 1,852,037 - +1.5 1,852,037 - +0.5 1,852,078 + HP15_1752 0.15 +0.1 1,852,078 + HP15_1752 0.15 +0.9 1,852,078 + HP15_1752 0.15 +0.4 1,852,103 - HP15_1752 0.23 -0.2 1,852,180 + HP15_1752 0.48 -0.4 1,852,212 + HP15_1752 0.58 -2.0 1,852,504 - HP15_1753 0.28 -1.3 1,852,522 - HP15_1753 0.32 -0.4 1,852,656 - HP15_1753 0.61 +4.1 1,852,693 + HP15_1753 0.68 -0.9 1,852,815 + +1.1 1,852,816 + +1.1 1,852,823 - -0.8 1,852,824 - +0.4 1,852,871 + +0.1 1,852,879 - -0.7 1,852,907 + +0.7 1,852,938 - HP15_1754 0.11 +0.7 1,852,967 - HP15_1754 0.15 -1.1 1,852,993 - HP15_1754 0.18 -0.5 1,853,066 + HP15_1754 0.27 -0.1 1,853,274 + HP15_1754 0.54 -0.8
Or see this region's nucleotide sequence