Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1464 and HP15_1465 are separated by 1 nucleotides HP15_1465 and HP15_1466 are separated by 155 nucleotides HP15_1466 and HP15_1467 are separated by 217 nucleotides HP15_1467 and HP15_1468 are separated by 34 nucleotides
HP15_1464: HP15_1464 - adenylate/guanylate cyclase, at 1,539,892 to 1,541,331
_1464
HP15_1465: HP15_1465 - conserved hypothetical protein, membrane, at 1,541,333 to 1,541,644
_1465
HP15_1466: HP15_1466 - nitroreductase family protein, at 1,541,800 to 1,542,351
_1466
HP15_1467: HP15_1467 - fFlagellar basal-body rod protein FlgB, at 1,542,569 to 1,542,988
_1467
HP15_1468: HP15_1468 - flagellar basal-body rod protein FlgC-like protein, at 1,543,023 to 1,543,472
_1468
Position (kb)
1541
1542
1543 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1540.850 kb on - strand, within HP15_1464 at 1540.959 kb on - strand, within HP15_1464 at 1540.973 kb on - strand, within HP15_1464 at 1541.106 kb on + strand, within HP15_1464 at 1541.124 kb on - strand, within HP15_1464 at 1541.124 kb on - strand, within HP15_1464 at 1541.147 kb on - strand, within HP15_1464 at 1541.209 kb on - strand at 1541.382 kb on + strand, within HP15_1465 at 1541.388 kb on + strand, within HP15_1465 at 1541.388 kb on + strand, within HP15_1465 at 1541.396 kb on - strand, within HP15_1465 at 1541.570 kb on + strand, within HP15_1465 at 1541.712 kb on + strand at 1541.720 kb on + strand at 1541.842 kb on - strand at 1541.842 kb on - strand at 1541.885 kb on - strand, within HP15_1466 at 1541.915 kb on + strand, within HP15_1466 at 1541.925 kb on + strand, within HP15_1466 at 1541.931 kb on - strand, within HP15_1466 at 1542.066 kb on - strand, within HP15_1466 at 1542.092 kb on - strand, within HP15_1466 at 1542.094 kb on + strand, within HP15_1466 at 1542.161 kb on + strand, within HP15_1466 at 1542.161 kb on + strand, within HP15_1466 at 1542.208 kb on + strand, within HP15_1466 at 1542.208 kb on + strand, within HP15_1466 at 1542.240 kb on - strand, within HP15_1466 at 1542.317 kb on - strand at 1542.403 kb on + strand at 1542.413 kb on + strand at 1542.519 kb on + strand at 1542.546 kb on + strand at 1542.574 kb on - strand at 1542.635 kb on + strand, within HP15_1467 at 1542.892 kb on + strand, within HP15_1467 at 1542.905 kb on - strand, within HP15_1467 at 1542.971 kb on + strand at 1542.995 kb on + strand at 1543.085 kb on + strand, within HP15_1468 at 1543.142 kb on + strand, within HP15_1468 at 1543.269 kb on - strand, within HP15_1468 at 1543.284 kb on + strand, within HP15_1468 at 1543.304 kb on + strand, within HP15_1468
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 1,540,850 - HP15_1464 0.67 +2.8 1,540,959 - HP15_1464 0.74 -0.7 1,540,973 - HP15_1464 0.75 +0.2 1,541,106 + HP15_1464 0.84 -0.5 1,541,124 - HP15_1464 0.86 +0.8 1,541,124 - HP15_1464 0.86 -0.3 1,541,147 - HP15_1464 0.87 +0.8 1,541,209 - +1.1 1,541,382 + HP15_1465 0.16 +1.6 1,541,388 + HP15_1465 0.18 -0.7 1,541,388 + HP15_1465 0.18 -0.9 1,541,396 - HP15_1465 0.20 -0.2 1,541,570 + HP15_1465 0.76 -1.6 1,541,712 + +0.3 1,541,720 + -0.6 1,541,842 - -2.1 1,541,842 - -0.1 1,541,885 - HP15_1466 0.15 -0.5 1,541,915 + HP15_1466 0.21 +2.1 1,541,925 + HP15_1466 0.23 -0.5 1,541,931 - HP15_1466 0.24 -0.4 1,542,066 - HP15_1466 0.48 -1.4 1,542,092 - HP15_1466 0.53 +0.1 1,542,094 + HP15_1466 0.53 +0.2 1,542,161 + HP15_1466 0.65 -0.6 1,542,161 + HP15_1466 0.65 -2.1 1,542,208 + HP15_1466 0.74 -0.9 1,542,208 + HP15_1466 0.74 +0.0 1,542,240 - HP15_1466 0.80 -0.4 1,542,317 - +1.1 1,542,403 + -0.4 1,542,413 + -2.6 1,542,519 + -1.0 1,542,546 + -2.0 1,542,574 - +0.2 1,542,635 + HP15_1467 0.16 -0.5 1,542,892 + HP15_1467 0.77 -1.0 1,542,905 - HP15_1467 0.80 -0.2 1,542,971 + +1.1 1,542,995 + -0.9 1,543,085 + HP15_1468 0.14 -0.3 1,543,142 + HP15_1468 0.26 +0.3 1,543,269 - HP15_1468 0.55 -2.3 1,543,284 + HP15_1468 0.58 -1.0 1,543,304 + HP15_1468 0.62 +1.0
Or see this region's nucleotide sequence