Strain Fitness in Marinobacter adhaerens HP15 around HP15_1451

Experiment: m.b. Paraquat dichloride 0.0075 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1449 and HP15_1450 are separated by 9 nucleotidesHP15_1450 and HP15_1451 are separated by 66 nucleotidesHP15_1451 and HP15_1452 are separated by 133 nucleotidesHP15_1452 and HP15_1453 overlap by 12 nucleotides HP15_1449: HP15_1449 - ABC transporter, ATP-binding protein, at 1,525,184 to 1,525,978 _1449 HP15_1450: HP15_1450 - inner-membrane translocator, at 1,525,988 to 1,526,890 _1450 HP15_1451: HP15_1451 - ABC-type uncharacterized transport system, periplasmic component, at 1,526,957 to 1,527,931 _1451 HP15_1452: HP15_1452 - hypothetical protein, at 1,528,065 to 1,528,214 _1452 HP15_1453: HP15_1453 - long-chain acyl-CoA synthetase, at 1,528,203 to 1,529,840 _1453 Position (kb) 1526 1527 1528Strain fitness (log2 ratio) -1 0 1 2 3at 1526.026 kb on + strandat 1526.053 kb on + strandat 1526.190 kb on - strand, within HP15_1450at 1526.230 kb on + strand, within HP15_1450at 1526.276 kb on - strand, within HP15_1450at 1526.316 kb on - strand, within HP15_1450at 1526.506 kb on + strand, within HP15_1450at 1526.594 kb on - strand, within HP15_1450at 1526.611 kb on + strand, within HP15_1450at 1526.725 kb on + strand, within HP15_1450at 1526.838 kb on + strandat 1527.177 kb on - strand, within HP15_1451at 1527.305 kb on - strand, within HP15_1451at 1527.323 kb on + strand, within HP15_1451at 1527.354 kb on + strand, within HP15_1451at 1527.364 kb on + strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.372 kb on - strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.434 kb on + strand, within HP15_1451at 1527.442 kb on - strand, within HP15_1451at 1527.608 kb on + strand, within HP15_1451at 1527.742 kb on + strand, within HP15_1451at 1527.757 kb on - strand, within HP15_1451at 1527.760 kb on + strand, within HP15_1451at 1527.799 kb on + strand, within HP15_1451at 1527.821 kb on + strand, within HP15_1451at 1527.905 kb on - strandat 1527.905 kb on - strandat 1527.911 kb on + strandat 1527.916 kb on + strandat 1527.921 kb on + strandat 1527.940 kb on - strandat 1528.010 kb on + strandat 1528.290 kb on - strandat 1528.447 kb on + strand, within HP15_1453at 1528.454 kb on + strand, within HP15_1453at 1528.617 kb on - strand, within HP15_1453at 1528.661 kb on - strand, within HP15_1453at 1528.720 kb on - strand, within HP15_1453at 1528.750 kb on + strand, within HP15_1453at 1528.773 kb on - strand, within HP15_1453at 1528.824 kb on + strand, within HP15_1453

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml
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1,526,026 + +2.2
1,526,053 + +0.1
1,526,190 - HP15_1450 0.22 +0.7
1,526,230 + HP15_1450 0.27 +1.3
1,526,276 - HP15_1450 0.32 -0.5
1,526,316 - HP15_1450 0.36 +0.6
1,526,506 + HP15_1450 0.57 +0.6
1,526,594 - HP15_1450 0.67 -1.3
1,526,611 + HP15_1450 0.69 +0.5
1,526,725 + HP15_1450 0.82 -0.2
1,526,838 + -0.2
1,527,177 - HP15_1451 0.23 -1.3
1,527,305 - HP15_1451 0.36 +0.4
1,527,323 + HP15_1451 0.38 +0.2
1,527,354 + HP15_1451 0.41 -1.3
1,527,364 + HP15_1451 0.42 +1.6
1,527,372 - HP15_1451 0.43 +0.4
1,527,372 - HP15_1451 0.43 -1.0
1,527,372 - HP15_1451 0.43 +0.9
1,527,434 + HP15_1451 0.49 +1.0
1,527,434 + HP15_1451 0.49 +3.3
1,527,434 + HP15_1451 0.49 -0.1
1,527,442 - HP15_1451 0.50 -0.0
1,527,608 + HP15_1451 0.67 +2.4
1,527,742 + HP15_1451 0.81 +0.8
1,527,757 - HP15_1451 0.82 -0.2
1,527,760 + HP15_1451 0.82 +1.7
1,527,799 + HP15_1451 0.86 +1.5
1,527,821 + HP15_1451 0.89 -0.4
1,527,905 - -0.3
1,527,905 - -1.1
1,527,911 + -1.2
1,527,916 + +1.1
1,527,921 + +1.5
1,527,940 - +0.8
1,528,010 + +2.4
1,528,290 - +0.7
1,528,447 + HP15_1453 0.15 +2.1
1,528,454 + HP15_1453 0.15 +0.8
1,528,617 - HP15_1453 0.25 -1.4
1,528,661 - HP15_1453 0.28 +0.1
1,528,720 - HP15_1453 0.32 +0.5
1,528,750 + HP15_1453 0.33 -1.3
1,528,773 - HP15_1453 0.35 -1.6
1,528,824 + HP15_1453 0.38 -0.8

Or see this region's nucleotide sequence