Experiment: m.b. Paraquat dichloride 0.0075 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1380 and HP15_1381 are separated by 107 nucleotides HP15_1381 and HP15_1382 are separated by 61 nucleotides HP15_1382 and HP15_tRNA26 are separated by 56 nucleotides HP15_tRNA26 and HP15_1383 are separated by 114 nucleotides
HP15_1380: HP15_1380 - conserved hypothetical protein, secreted, at 1,455,510 to 1,456,118
_1380
HP15_1381: HP15_1381 - conserved hypothetical protein, at 1,456,226 to 1,456,711
_1381
HP15_1382: HP15_1382 - M18-family aminopeptidase 2, at 1,456,773 to 1,458,122
_1382
HP15_tRNA26: HP15_tRNA26 - tRNA-Asn, at 1,458,179 to 1,458,254
_tRNA26
HP15_1383: HP15_1383 - AB-hydrolase YheT, putative, at 1,458,369 to 1,459,292
_1383
Position (kb)
1456
1457
1458
1459 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1455.792 kb on + strand, within HP15_1380 at 1455.792 kb on + strand, within HP15_1380 at 1455.800 kb on - strand, within HP15_1380 at 1455.800 kb on - strand, within HP15_1380 at 1455.846 kb on + strand, within HP15_1380 at 1455.847 kb on - strand, within HP15_1380 at 1456.044 kb on - strand, within HP15_1380 at 1456.089 kb on + strand at 1456.097 kb on - strand at 1456.108 kb on + strand at 1456.116 kb on - strand at 1456.199 kb on - strand at 1456.238 kb on + strand at 1456.251 kb on - strand at 1456.771 kb on + strand at 1456.779 kb on - strand at 1456.845 kb on + strand at 1457.164 kb on + strand, within HP15_1382 at 1457.457 kb on + strand, within HP15_1382 at 1457.464 kb on - strand, within HP15_1382 at 1457.465 kb on - strand, within HP15_1382 at 1457.625 kb on + strand, within HP15_1382 at 1457.693 kb on - strand, within HP15_1382 at 1457.717 kb on - strand, within HP15_1382 at 1457.831 kb on + strand, within HP15_1382 at 1457.831 kb on + strand, within HP15_1382 at 1458.013 kb on - strand at 1458.393 kb on + strand at 1458.482 kb on - strand, within HP15_1383 at 1458.630 kb on + strand, within HP15_1383 at 1458.697 kb on - strand, within HP15_1383 at 1458.754 kb on + strand, within HP15_1383 at 1459.066 kb on - strand, within HP15_1383 at 1459.068 kb on - strand, within HP15_1383
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.0075 mg/ml remove 1,455,792 + HP15_1380 0.46 -1.9 1,455,792 + HP15_1380 0.46 +0.1 1,455,800 - HP15_1380 0.48 -0.2 1,455,800 - HP15_1380 0.48 +0.1 1,455,846 + HP15_1380 0.55 +2.1 1,455,847 - HP15_1380 0.55 -0.1 1,456,044 - HP15_1380 0.88 +1.2 1,456,089 + -0.4 1,456,097 - -0.8 1,456,108 + +0.5 1,456,116 - -1.1 1,456,199 - +1.0 1,456,238 + -0.2 1,456,251 - -0.1 1,456,771 + -0.1 1,456,779 - +0.5 1,456,845 + +0.3 1,457,164 + HP15_1382 0.29 +2.9 1,457,457 + HP15_1382 0.51 +0.2 1,457,464 - HP15_1382 0.51 +0.8 1,457,465 - HP15_1382 0.51 +0.6 1,457,625 + HP15_1382 0.63 +1.3 1,457,693 - HP15_1382 0.68 +4.7 1,457,717 - HP15_1382 0.70 +0.5 1,457,831 + HP15_1382 0.78 -0.4 1,457,831 + HP15_1382 0.78 +2.8 1,458,013 - -0.5 1,458,393 + +0.1 1,458,482 - HP15_1383 0.12 +0.4 1,458,630 + HP15_1383 0.28 +0.9 1,458,697 - HP15_1383 0.35 +0.3 1,458,754 + HP15_1383 0.42 -0.3 1,459,066 - HP15_1383 0.75 +0.2 1,459,068 - HP15_1383 0.76 -0.2
Or see this region's nucleotide sequence