Experiment: m.b. Phosphomycin 1 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09590 and PGA1_c09600 are separated by 75 nucleotides PGA1_c09600 and PGA1_c09610 are separated by 19 nucleotides
PGA1_c09590: PGA1_c09590 - uncharacterized protein YhiN, at 983,252 to 984,433
_c09590
PGA1_c09600: PGA1_c09600 - cell division protein ftsW, at 984,509 to 985,777
_c09600
PGA1_c09610: PGA1_c09610 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG, at 985,797 to 986,894
_c09610
Position (kb) 984
985
986 Strain fitness (log2 ratio) -2
-1
0
1 at 983.519 kb on + strand, within PGA1_c09590 at 983.538 kb on + strand, within PGA1_c09590 at 983.539 kb on + strand, within PGA1_c09590 at 983.672 kb on + strand, within PGA1_c09590 at 983.687 kb on + strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.741 kb on - strand, within PGA1_c09590 at 983.743 kb on + strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.809 kb on + strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.876 kb on - strand, within PGA1_c09590 at 983.916 kb on - strand, within PGA1_c09590 at 983.936 kb on - strand, within PGA1_c09590 at 983.982 kb on + strand, within PGA1_c09590 at 984.036 kb on - strand, within PGA1_c09590 at 984.050 kb on + strand, within PGA1_c09590 at 984.073 kb on + strand, within PGA1_c09590 at 984.138 kb on + strand, within PGA1_c09590 at 984.381 kb on + strand at 984.386 kb on + strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.412 kb on + strand at 984.413 kb on + strand at 984.413 kb on + strand at 984.420 kb on - strand at 984.421 kb on - strand at 984.477 kb on - strand at 985.701 kb on - strand at 985.701 kb on - strand at 985.729 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Phosphomycin 1 mg/ml remove 983,519 + PGA1_c09590 0.23 -2.5 983,538 + PGA1_c09590 0.24 +1.3 983,539 + PGA1_c09590 0.24 -0.8 983,672 + PGA1_c09590 0.36 -0.0 983,687 + PGA1_c09590 0.37 -0.4 983,695 - PGA1_c09590 0.37 -1.4 983,695 - PGA1_c09590 0.37 +0.3 983,741 - PGA1_c09590 0.41 -0.3 983,743 + PGA1_c09590 0.42 -0.8 983,798 - PGA1_c09590 0.46 +0.2 983,798 - PGA1_c09590 0.46 +0.2 983,809 + PGA1_c09590 0.47 +1.1 983,817 - PGA1_c09590 0.48 -0.6 983,817 - PGA1_c09590 0.48 -2.2 983,876 - PGA1_c09590 0.53 -0.3 983,916 - PGA1_c09590 0.56 -0.3 983,936 - PGA1_c09590 0.58 +0.0 983,982 + PGA1_c09590 0.62 -0.8 984,036 - PGA1_c09590 0.66 -0.7 984,050 + PGA1_c09590 0.68 -1.9 984,073 + PGA1_c09590 0.69 +0.8 984,138 + PGA1_c09590 0.75 +1.5 984,381 + +0.5 984,386 + -0.1 984,394 - +0.8 984,394 - +0.8 984,394 - +0.1 984,412 + +1.4 984,413 + +0.5 984,413 + -1.1 984,420 - +0.4 984,421 - +1.3 984,477 - +1.4 985,701 - +0.6 985,701 - -0.5 985,729 + +0.5 985,739 + -1.7 985,739 + -0.2 985,739 + +1.0 985,739 + -1.6
Or see this region's nucleotide sequence