Experiment: m.b. Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_496 and HP15_497 overlap by 4 nucleotides HP15_497 and HP15_498 are separated by 17 nucleotides HP15_498 and HP15_499 are separated by 138 nucleotides HP15_499 and HP15_500 are separated by 110 nucleotides HP15_500 and HP15_501 are separated by 33 nucleotides
HP15_496: HP15_496 - thiamine-monophosphate kinase, at 510,398 to 511,354
_496
HP15_497: HP15_497 - phosphatidylglycerophosphatase A, at 511,351 to 511,878
_497
HP15_498: HP15_498 - thiolase-like protein, at 511,896 to 512,099
_498
HP15_499: HP15_499 - hypothetical protein, at 512,238 to 512,348
_499
HP15_500: HP15_500 - conserved hypothetical protein, at 512,459 to 513,064
_500
HP15_501: HP15_501 - acyltransferase, WS/DGAT/MGAT, at 513,098 to 514,684
_501
Position (kb) 511
512
513 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 511.998 kb on - strand, within HP15_498 at 512.000 kb on - strand, within HP15_498 at 512.000 kb on - strand, within HP15_498 at 512.028 kb on + strand, within HP15_498 at 512.113 kb on - strand at 512.376 kb on + strand at 512.455 kb on - strand at 512.551 kb on + strand, within HP15_500 at 512.551 kb on - strand, within HP15_500 at 512.635 kb on - strand, within HP15_500 at 512.785 kb on - strand, within HP15_500 at 512.985 kb on + strand, within HP15_500 at 512.985 kb on + strand, within HP15_500 at 513.003 kb on - strand, within HP15_500 at 513.073 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.002 mg/ml remove 511,998 - HP15_498 0.50 +1.4 512,000 - HP15_498 0.51 +2.2 512,000 - HP15_498 0.51 -0.1 512,028 + HP15_498 0.65 -0.7 512,113 - -0.9 512,376 + +0.1 512,455 - -1.2 512,551 + HP15_500 0.15 -1.2 512,551 - HP15_500 0.15 +0.3 512,635 - HP15_500 0.29 +0.7 512,785 - HP15_500 0.54 -0.0 512,985 + HP15_500 0.87 +0.7 512,985 + HP15_500 0.87 +0.4 513,003 - HP15_500 0.90 +0.6 513,073 - -2.9
Or see this region's nucleotide sequence