Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4234 and Psest_4235 are separated by 43 nucleotides Psest_4235 and Psest_4236 are separated by 231 nucleotides
Psest_4234: Psest_4234 - Acyl-CoA dehydrogenases, at 4,416,022 to 4,417,218
_4234
Psest_4235: Psest_4235 - 3-hydroxyacyl-CoA dehydrogenase, at 4,417,262 to 4,419,367
_4235
Psest_4236: Psest_4236 - Predicted signal transduction protein, at 4,419,599 to 4,420,807
_4236
Position (kb)
4417
4418
4419
4420 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.504 kb on - strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.768 kb on - strand, within Psest_4234 at 4416.871 kb on - strand, within Psest_4234 at 4416.881 kb on + strand, within Psest_4234 at 4416.882 kb on - strand, within Psest_4234 at 4417.053 kb on - strand, within Psest_4234 at 4417.053 kb on - strand, within Psest_4234 at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.205 kb on + strand at 4417.206 kb on - strand at 4417.206 kb on - strand at 4417.206 kb on - strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.263 kb on + strand at 4417.264 kb on - strand at 4417.264 kb on - strand at 4417.264 kb on - strand at 4417.264 kb on - strand at 4417.264 kb on - strand at 4417.407 kb on + strand at 4417.407 kb on + strand at 4417.408 kb on - strand at 4417.408 kb on - strand at 4417.408 kb on - strand at 4417.456 kb on - strand at 4417.456 kb on - strand at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.551 kb on + strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.552 kb on - strand, within Psest_4235 at 4417.609 kb on + strand, within Psest_4235 at 4417.609 kb on + strand, within Psest_4235 at 4417.609 kb on + strand, within Psest_4235 at 4417.610 kb on - strand, within Psest_4235 at 4417.656 kb on + strand, within Psest_4235 at 4418.343 kb on + strand, within Psest_4235 at 4418.343 kb on + strand, within Psest_4235 at 4418.343 kb on + strand, within Psest_4235 at 4418.344 kb on - strand, within Psest_4235 at 4418.344 kb on - strand, within Psest_4235 at 4418.344 kb on - strand, within Psest_4235 at 4418.773 kb on + strand, within Psest_4235 at 4418.773 kb on + strand, within Psest_4235 at 4418.774 kb on - strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.814 kb on + strand, within Psest_4235 at 4418.815 kb on - strand, within Psest_4235 at 4418.815 kb on - strand, within Psest_4235 at 4418.815 kb on - strand, within Psest_4235 at 4418.815 kb on - strand, within Psest_4235 at 4419.227 kb on + strand at 4419.227 kb on + strand at 4419.227 kb on + strand at 4419.228 kb on - strand at 4419.505 kb on + strand at 4419.506 kb on - strand at 4419.506 kb on - strand at 4419.559 kb on - strand at 4419.573 kb on + strand at 4419.662 kb on + strand at 4419.662 kb on + strand at 4419.662 kb on + strand at 4419.662 kb on + strand at 4419.662 kb on + strand at 4419.663 kb on - strand at 4419.667 kb on + strand at 4419.668 kb on - strand at 4419.668 kb on - strand at 4419.688 kb on + strand at 4419.688 kb on + strand at 4419.688 kb on + strand at 4419.688 kb on + strand at 4419.688 kb on + strand at 4419.770 kb on + strand, within Psest_4236 at 4419.770 kb on + strand, within Psest_4236 at 4419.770 kb on + strand, within Psest_4236 at 4419.771 kb on - strand, within Psest_4236 at 4419.771 kb on - strand, within Psest_4236 at 4419.771 kb on - strand, within Psest_4236 at 4419.771 kb on - strand, within Psest_4236 at 4419.777 kb on + strand, within Psest_4236 at 4419.777 kb on + strand, within Psest_4236 at 4419.777 kb on + strand, within Psest_4236 at 4419.777 kb on + strand, within Psest_4236 at 4419.777 kb on + strand, within Psest_4236 at 4419.778 kb on - strand, within Psest_4236 at 4419.778 kb on - strand, within Psest_4236 at 4419.778 kb on - strand, within Psest_4236 at 4419.780 kb on + strand, within Psest_4236 at 4419.780 kb on + strand, within Psest_4236 at 4419.780 kb on + strand, within Psest_4236 at 4419.781 kb on - strand, within Psest_4236 at 4419.791 kb on + strand, within Psest_4236 at 4419.791 kb on + strand, within Psest_4236 at 4419.792 kb on - strand, within Psest_4236 at 4419.792 kb on - strand, within Psest_4236 at 4419.792 kb on - strand, within Psest_4236 at 4420.313 kb on + strand, within Psest_4236 at 4420.314 kb on - strand, within Psest_4236
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 4,416,503 + Psest_4234 0.40 +0.9 4,416,503 + Psest_4234 0.40 -2.0 4,416,503 + Psest_4234 0.40 +0.3 4,416,504 - Psest_4234 0.40 +0.4 4,416,767 + Psest_4234 0.62 -0.8 4,416,767 + Psest_4234 0.62 +0.9 4,416,767 + Psest_4234 0.62 -1.4 4,416,767 + Psest_4234 0.62 +1.1 4,416,767 + Psest_4234 0.62 +0.3 4,416,768 - Psest_4234 0.62 +0.9 4,416,871 - Psest_4234 0.71 +0.1 4,416,881 + Psest_4234 0.72 -0.0 4,416,882 - Psest_4234 0.72 +0.3 4,417,053 - Psest_4234 0.86 +0.2 4,417,053 - Psest_4234 0.86 -1.7 4,417,205 + -1.3 4,417,205 + -1.3 4,417,205 + +1.6 4,417,205 + +0.4 4,417,205 + +1.3 4,417,205 + -0.3 4,417,205 + +0.4 4,417,205 + +0.5 4,417,205 + +1.3 4,417,206 - -0.8 4,417,206 - +0.3 4,417,206 - -2.7 4,417,263 + -0.0 4,417,263 + -1.3 4,417,263 + +0.1 4,417,263 + -0.6 4,417,263 + +0.3 4,417,263 + +0.2 4,417,263 + -0.6 4,417,263 + -0.2 4,417,264 - -0.2 4,417,264 - +0.8 4,417,264 - -0.7 4,417,264 - +1.0 4,417,264 - -0.1 4,417,407 + +0.6 4,417,407 + -0.3 4,417,408 - -0.9 4,417,408 - -0.2 4,417,408 - -0.5 4,417,456 - -0.3 4,417,456 - +0.7 4,417,551 + Psest_4235 0.14 -1.0 4,417,551 + Psest_4235 0.14 -1.2 4,417,551 + Psest_4235 0.14 -2.2 4,417,551 + Psest_4235 0.14 -0.8 4,417,551 + Psest_4235 0.14 -0.9 4,417,551 + Psest_4235 0.14 -0.0 4,417,551 + Psest_4235 0.14 +0.7 4,417,551 + Psest_4235 0.14 +0.6 4,417,551 + Psest_4235 0.14 +0.7 4,417,551 + Psest_4235 0.14 -1.0 4,417,551 + Psest_4235 0.14 -0.1 4,417,551 + Psest_4235 0.14 +0.2 4,417,551 + Psest_4235 0.14 -2.5 4,417,551 + Psest_4235 0.14 +0.1 4,417,551 + Psest_4235 0.14 -0.2 4,417,551 + Psest_4235 0.14 -1.5 4,417,552 - Psest_4235 0.14 -0.9 4,417,552 - Psest_4235 0.14 -0.7 4,417,552 - Psest_4235 0.14 -0.5 4,417,552 - Psest_4235 0.14 +0.4 4,417,552 - Psest_4235 0.14 -0.0 4,417,552 - Psest_4235 0.14 +0.9 4,417,552 - Psest_4235 0.14 +0.3 4,417,552 - Psest_4235 0.14 -1.1 4,417,552 - Psest_4235 0.14 -0.7 4,417,552 - Psest_4235 0.14 +0.0 4,417,552 - Psest_4235 0.14 -0.8 4,417,552 - Psest_4235 0.14 -0.7 4,417,552 - Psest_4235 0.14 -0.2 4,417,552 - Psest_4235 0.14 +0.1 4,417,552 - Psest_4235 0.14 +1.0 4,417,552 - Psest_4235 0.14 -0.1 4,417,552 - Psest_4235 0.14 +0.1 4,417,609 + Psest_4235 0.16 -1.6 4,417,609 + Psest_4235 0.16 -0.6 4,417,609 + Psest_4235 0.16 -0.4 4,417,610 - Psest_4235 0.17 +0.3 4,417,656 + Psest_4235 0.19 -0.0 4,418,343 + Psest_4235 0.51 +1.7 4,418,343 + Psest_4235 0.51 +0.5 4,418,343 + Psest_4235 0.51 +0.9 4,418,344 - Psest_4235 0.51 +0.2 4,418,344 - Psest_4235 0.51 -0.5 4,418,344 - Psest_4235 0.51 +0.0 4,418,773 + Psest_4235 0.72 -0.5 4,418,773 + Psest_4235 0.72 +0.2 4,418,774 - Psest_4235 0.72 +0.1 4,418,814 + Psest_4235 0.74 +1.9 4,418,814 + Psest_4235 0.74 -0.0 4,418,814 + Psest_4235 0.74 -1.5 4,418,814 + Psest_4235 0.74 -1.2 4,418,814 + Psest_4235 0.74 -0.0 4,418,814 + Psest_4235 0.74 -1.9 4,418,814 + Psest_4235 0.74 +0.3 4,418,814 + Psest_4235 0.74 -1.3 4,418,814 + Psest_4235 0.74 +0.1 4,418,814 + Psest_4235 0.74 -1.4 4,418,815 - Psest_4235 0.74 -0.2 4,418,815 - Psest_4235 0.74 -1.0 4,418,815 - Psest_4235 0.74 -0.5 4,418,815 - Psest_4235 0.74 +0.1 4,419,227 + -0.7 4,419,227 + +0.3 4,419,227 + +1.7 4,419,228 - +0.2 4,419,505 + +0.7 4,419,506 - -0.5 4,419,506 - +0.1 4,419,559 - -0.6 4,419,573 + +2.3 4,419,662 + -1.9 4,419,662 + +1.3 4,419,662 + +0.9 4,419,662 + -0.7 4,419,662 + +0.9 4,419,663 - +0.1 4,419,667 + +0.5 4,419,668 - -1.1 4,419,668 - +0.7 4,419,688 + +0.3 4,419,688 + -0.7 4,419,688 + +0.3 4,419,688 + +0.3 4,419,688 + -0.3 4,419,770 + Psest_4236 0.14 -1.4 4,419,770 + Psest_4236 0.14 -0.7 4,419,770 + Psest_4236 0.14 -2.0 4,419,771 - Psest_4236 0.14 +0.0 4,419,771 - Psest_4236 0.14 -0.3 4,419,771 - Psest_4236 0.14 +1.0 4,419,771 - Psest_4236 0.14 -0.1 4,419,777 + Psest_4236 0.15 -1.2 4,419,777 + Psest_4236 0.15 +1.3 4,419,777 + Psest_4236 0.15 +2.3 4,419,777 + Psest_4236 0.15 -0.3 4,419,777 + Psest_4236 0.15 -0.1 4,419,778 - Psest_4236 0.15 -1.3 4,419,778 - Psest_4236 0.15 +0.2 4,419,778 - Psest_4236 0.15 +0.2 4,419,780 + Psest_4236 0.15 -0.7 4,419,780 + Psest_4236 0.15 +0.1 4,419,780 + Psest_4236 0.15 -0.0 4,419,781 - Psest_4236 0.15 -0.9 4,419,791 + Psest_4236 0.16 -0.9 4,419,791 + Psest_4236 0.16 -0.3 4,419,792 - Psest_4236 0.16 -2.4 4,419,792 - Psest_4236 0.16 +0.0 4,419,792 - Psest_4236 0.16 +0.1 4,420,313 + Psest_4236 0.59 -1.1 4,420,314 - Psest_4236 0.59 -1.5
Or see this region's nucleotide sequence