Strain Fitness in Marinobacter adhaerens HP15 around HP15_2594

Experiment: m.b. Paraquat dichloride 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2591 and HP15_2592 are separated by 9 nucleotidesHP15_2592 and HP15_2593 overlap by 8 nucleotidesHP15_2593 and HP15_2594 are separated by 70 nucleotidesHP15_2594 and HP15_2595 are separated by 187 nucleotides HP15_2591: HP15_2591 - monovalent cation/H+ antiporter subunit E, at 2,741,247 to 2,741,720 _2591 HP15_2592: HP15_2592 - multiple resistance and pH regulation protein F, at 2,741,730 to 2,742,002 _2592 HP15_2593: HP15_2593 - monovalent cation/proton antiporter, MnhG/PhaG subunit, at 2,741,995 to 2,742,402 _2593 HP15_2594: HP15_2594 - hypothetical protein, at 2,742,473 to 2,742,754 _2594 HP15_2595: HP15_2595 - acyl-CoA synthetase, at 2,742,942 to 2,744,585 _2595 Position (kb) 2742 2743Strain fitness (log2 ratio) -2 -1 0 1 2at 2741.593 kb on + strand, within HP15_2591at 2741.666 kb on + strand, within HP15_2591at 2741.674 kb on - strandat 2741.696 kb on - strandat 2741.804 kb on - strand, within HP15_2592at 2741.809 kb on + strand, within HP15_2592at 2741.833 kb on - strand, within HP15_2592at 2741.898 kb on + strand, within HP15_2592at 2742.151 kb on + strand, within HP15_2593at 2742.159 kb on - strand, within HP15_2593at 2742.334 kb on - strand, within HP15_2593at 2742.359 kb on - strand, within HP15_2593at 2742.395 kb on - strandat 2742.460 kb on - strandat 2742.508 kb on - strand, within HP15_2594at 2742.526 kb on + strand, within HP15_2594at 2742.528 kb on + strand, within HP15_2594at 2742.554 kb on - strand, within HP15_2594at 2742.621 kb on + strand, within HP15_2594at 2742.637 kb on - strand, within HP15_2594at 2742.642 kb on + strand, within HP15_2594at 2742.729 kb on + strandat 2742.731 kb on + strandat 2742.731 kb on + strandat 2742.731 kb on + strandat 2742.744 kb on + strandat 2742.937 kb on - strandat 2743.188 kb on + strand, within HP15_2595at 2743.274 kb on + strand, within HP15_2595at 2743.407 kb on + strand, within HP15_2595at 2743.533 kb on + strand, within HP15_2595at 2743.588 kb on + strand, within HP15_2595at 2743.615 kb on - strand, within HP15_2595at 2743.675 kb on - strand, within HP15_2595at 2743.712 kb on + strand, within HP15_2595at 2743.712 kb on + strand, within HP15_2595at 2743.727 kb on + strand, within HP15_2595

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.002 mg/ml
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2,741,593 + HP15_2591 0.73 +0.5
2,741,666 + HP15_2591 0.88 -0.3
2,741,674 - -0.1
2,741,696 - +0.3
2,741,804 - HP15_2592 0.27 -0.5
2,741,809 + HP15_2592 0.29 -0.8
2,741,833 - HP15_2592 0.38 +0.6
2,741,898 + HP15_2592 0.62 -0.4
2,742,151 + HP15_2593 0.38 -0.6
2,742,159 - HP15_2593 0.40 -0.7
2,742,334 - HP15_2593 0.83 +0.6
2,742,359 - HP15_2593 0.89 +0.2
2,742,395 - +0.2
2,742,460 - -0.5
2,742,508 - HP15_2594 0.12 -0.4
2,742,526 + HP15_2594 0.19 -0.3
2,742,528 + HP15_2594 0.20 -0.3
2,742,554 - HP15_2594 0.29 -0.8
2,742,621 + HP15_2594 0.52 +0.1
2,742,637 - HP15_2594 0.58 -0.8
2,742,642 + HP15_2594 0.60 +0.2
2,742,729 + -0.1
2,742,731 + -0.4
2,742,731 + -0.1
2,742,731 + +0.5
2,742,744 + +2.5
2,742,937 - -0.4
2,743,188 + HP15_2595 0.15 -0.3
2,743,274 + HP15_2595 0.20 +0.1
2,743,407 + HP15_2595 0.28 +0.3
2,743,533 + HP15_2595 0.36 +0.3
2,743,588 + HP15_2595 0.39 -2.2
2,743,615 - HP15_2595 0.41 -0.8
2,743,675 - HP15_2595 0.45 -0.4
2,743,712 + HP15_2595 0.47 -1.0
2,743,712 + HP15_2595 0.47 +0.3
2,743,727 + HP15_2595 0.48 -0.2

Or see this region's nucleotide sequence