Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2491 and Psest_2492 are separated by 194 nucleotides Psest_2492 and Psest_2493 are separated by 95 nucleotides
Psest_2491: Psest_2491 - succinyl-CoA synthetase, beta subunit, at 2,664,094 to 2,665,260
_2491
Psest_2492: Psest_2492 - dihydrolipoamide dehydrogenase, at 2,665,455 to 2,666,891
_2492
Psest_2493: Psest_2493 - 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component), at 2,666,987 to 2,668,207
_2493
Position (kb)
2665
2666
2667 Strain fitness (log2 ratio)
-1
0
1
2 at 2664.506 kb on + strand, within Psest_2491 at 2664.506 kb on + strand, within Psest_2491 at 2664.506 kb on + strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.507 kb on - strand, within Psest_2491 at 2664.591 kb on - strand, within Psest_2491 at 2664.689 kb on + strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.690 kb on - strand, within Psest_2491 at 2664.935 kb on + strand, within Psest_2491 at 2665.082 kb on - strand, within Psest_2491 at 2665.200 kb on + strand at 2665.236 kb on + strand at 2665.267 kb on + strand at 2665.295 kb on - strand at 2665.358 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 2,664,506 + Psest_2491 0.35 -0.5 2,664,506 + Psest_2491 0.35 +1.0 2,664,506 + Psest_2491 0.35 +2.2 2,664,507 - Psest_2491 0.35 +1.4 2,664,507 - Psest_2491 0.35 +0.8 2,664,507 - Psest_2491 0.35 -0.1 2,664,507 - Psest_2491 0.35 +0.5 2,664,507 - Psest_2491 0.35 +1.2 2,664,591 - Psest_2491 0.43 -0.1 2,664,689 + Psest_2491 0.51 -0.1 2,664,690 - Psest_2491 0.51 +0.6 2,664,690 - Psest_2491 0.51 -0.0 2,664,690 - Psest_2491 0.51 +0.6 2,664,690 - Psest_2491 0.51 -0.4 2,664,935 + Psest_2491 0.72 +0.3 2,665,082 - Psest_2491 0.85 +0.9 2,665,200 + +0.2 2,665,236 + +1.9 2,665,267 + +0.9 2,665,295 - +0.4 2,665,358 - -1.0
Or see this region's nucleotide sequence