Experiment: m.b. Paraquat dichloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2385 and HP15_2386 are separated by 28 nucleotides HP15_2386 and HP15_2387 are separated by 8 nucleotides HP15_2387 and HP15_2388 are separated by 1 nucleotides
HP15_2385: HP15_2385 - UDP-glucose 6-dehydrogenase, at 2,515,051 to 2,516,223
_2385
HP15_2386: HP15_2386 - UDP-glucose 4-epimerase, at 2,516,252 to 2,517,208
_2386
HP15_2387: HP15_2387 - dTDP-glucose 4-6-dehydratase, at 2,517,217 to 2,518,164
_2387
HP15_2388: HP15_2388 - glycosyl transferase-like protein, at 2,518,166 to 2,518,474
_2388
Position (kb)
2516
2517
2518 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2515.317 kb on + strand, within HP15_2385 at 2515.416 kb on + strand, within HP15_2385 at 2515.456 kb on - strand, within HP15_2385 at 2515.529 kb on + strand, within HP15_2385 at 2515.571 kb on + strand, within HP15_2385 at 2515.571 kb on + strand, within HP15_2385 at 2515.670 kb on - strand, within HP15_2385 at 2515.746 kb on + strand, within HP15_2385 at 2515.755 kb on - strand, within HP15_2385 at 2515.756 kb on + strand, within HP15_2385 at 2515.773 kb on + strand, within HP15_2385 at 2515.775 kb on + strand, within HP15_2385 at 2515.832 kb on + strand, within HP15_2385 at 2515.832 kb on + strand, within HP15_2385 at 2515.832 kb on + strand, within HP15_2385 at 2515.832 kb on + strand at 2515.832 kb on + strand, within HP15_2385 at 2515.840 kb on - strand, within HP15_2385 at 2515.916 kb on - strand, within HP15_2385 at 2515.924 kb on + strand, within HP15_2385 at 2516.001 kb on - strand, within HP15_2385 at 2516.051 kb on - strand, within HP15_2385 at 2516.180 kb on + strand at 2516.195 kb on + strand at 2516.402 kb on + strand, within HP15_2386 at 2516.402 kb on + strand, within HP15_2386 at 2516.402 kb on + strand, within HP15_2386 at 2516.410 kb on - strand, within HP15_2386 at 2516.460 kb on + strand, within HP15_2386 at 2516.461 kb on + strand, within HP15_2386 at 2516.493 kb on + strand, within HP15_2386 at 2516.510 kb on - strand, within HP15_2386 at 2516.605 kb on + strand, within HP15_2386 at 2516.613 kb on - strand, within HP15_2386 at 2516.619 kb on + strand, within HP15_2386 at 2516.736 kb on - strand, within HP15_2386 at 2516.761 kb on + strand, within HP15_2386 at 2516.793 kb on - strand, within HP15_2386 at 2516.839 kb on - strand, within HP15_2386 at 2516.891 kb on + strand, within HP15_2386 at 2517.067 kb on + strand, within HP15_2386 at 2517.081 kb on + strand, within HP15_2386 at 2517.082 kb on - strand, within HP15_2386 at 2517.157 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.002 mg/ml remove 2,515,317 + HP15_2385 0.23 -0.1 2,515,416 + HP15_2385 0.31 +1.1 2,515,456 - HP15_2385 0.35 +0.0 2,515,529 + HP15_2385 0.41 -0.2 2,515,571 + HP15_2385 0.44 -0.2 2,515,571 + HP15_2385 0.44 -0.1 2,515,670 - HP15_2385 0.53 -0.0 2,515,746 + HP15_2385 0.59 -0.2 2,515,755 - HP15_2385 0.60 +0.1 2,515,756 + HP15_2385 0.60 +0.4 2,515,773 + HP15_2385 0.62 +0.1 2,515,775 + HP15_2385 0.62 -0.2 2,515,832 + HP15_2385 0.67 +0.9 2,515,832 + HP15_2385 0.67 -0.7 2,515,832 + HP15_2385 0.67 +0.4 2,515,832 + -0.2 2,515,832 + HP15_2385 0.67 +0.6 2,515,840 - HP15_2385 0.67 +3.2 2,515,916 - HP15_2385 0.74 +0.6 2,515,924 + HP15_2385 0.74 +0.2 2,516,001 - HP15_2385 0.81 +0.2 2,516,051 - HP15_2385 0.85 +0.2 2,516,180 + +0.5 2,516,195 + -0.3 2,516,402 + HP15_2386 0.16 +0.7 2,516,402 + HP15_2386 0.16 +0.7 2,516,402 + HP15_2386 0.16 -1.9 2,516,410 - HP15_2386 0.17 +0.4 2,516,460 + HP15_2386 0.22 +0.4 2,516,461 + HP15_2386 0.22 +0.7 2,516,493 + HP15_2386 0.25 +0.8 2,516,510 - HP15_2386 0.27 +0.3 2,516,605 + HP15_2386 0.37 +0.7 2,516,613 - HP15_2386 0.38 +0.6 2,516,619 + HP15_2386 0.38 +0.3 2,516,736 - HP15_2386 0.51 +0.6 2,516,761 + HP15_2386 0.53 +0.8 2,516,793 - HP15_2386 0.57 -0.4 2,516,839 - HP15_2386 0.61 +1.4 2,516,891 + HP15_2386 0.67 +2.0 2,517,067 + HP15_2386 0.85 -0.6 2,517,081 + HP15_2386 0.87 -0.1 2,517,082 - HP15_2386 0.87 +0.4 2,517,157 + +0.4
Or see this region's nucleotide sequence