Strain Fitness in Marinobacter adhaerens HP15 around HP15_151

Experiment: m.b. Paraquat dichloride 0.002 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_149 and HP15_150 are separated by 27 nucleotidesHP15_150 and HP15_151 are separated by 46 nucleotidesHP15_151 and HP15_152 are separated by 7 nucleotidesHP15_152 and HP15_153 are separated by 1 nucleotides HP15_149: HP15_149 - conserved hypothetical protein, at 150,691 to 151,485 _149 HP15_150: HP15_150 - hypothetical protein, at 151,513 to 151,749 _150 HP15_151: HP15_151 - conserved hypothetical protein, membrane, at 151,796 to 152,884 _151 HP15_152: HP15_152 - conserved hypothetical protein, at 152,892 to 153,125 _152 HP15_153: HP15_153 - DSBA oxidoreductase, at 153,127 to 153,918 _153 Position (kb) 151 152 153Strain fitness (log2 ratio) -3 -2 -1 0 1at 150.848 kb on - strand, within HP15_149at 150.849 kb on - strand, within HP15_149at 150.915 kb on + strand, within HP15_149at 150.943 kb on + strand, within HP15_149at 150.953 kb on - strand, within HP15_149at 150.953 kb on - strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.014 kb on + strand, within HP15_149at 151.022 kb on - strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.024 kb on + strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.032 kb on - strand, within HP15_149at 151.067 kb on - strand, within HP15_149at 151.148 kb on + strand, within HP15_149at 151.196 kb on + strand, within HP15_149at 151.276 kb on + strand, within HP15_149at 151.276 kb on + strand, within HP15_149at 151.284 kb on - strand, within HP15_149at 151.286 kb on + strand, within HP15_149at 151.286 kb on + strand, within HP15_149at 151.341 kb on + strand, within HP15_149at 151.347 kb on + strand, within HP15_149at 151.372 kb on + strand, within HP15_149at 151.380 kb on - strand, within HP15_149at 151.380 kb on - strand, within HP15_149at 151.411 kb on + strandat 151.421 kb on + strandat 151.429 kb on - strandat 151.429 kb on - strandat 151.447 kb on + strandat 151.474 kb on + strandat 151.645 kb on + strand, within HP15_150at 151.673 kb on - strand, within HP15_150at 151.677 kb on + strand, within HP15_150at 151.766 kb on + strandat 151.801 kb on - strandat 151.838 kb on - strandat 151.905 kb on - strand, within HP15_151at 151.912 kb on + strand, within HP15_151at 151.920 kb on - strand, within HP15_151at 152.032 kb on + strand, within HP15_151at 152.104 kb on - strand, within HP15_151at 152.221 kb on + strand, within HP15_151at 152.225 kb on + strand, within HP15_151at 152.251 kb on + strand, within HP15_151at 152.259 kb on - strand, within HP15_151at 152.281 kb on - strand, within HP15_151at 152.311 kb on + strand, within HP15_151at 152.311 kb on + strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.319 kb on - strand, within HP15_151at 152.437 kb on + strand, within HP15_151at 152.452 kb on + strand, within HP15_151at 152.452 kb on + strand, within HP15_151at 152.570 kb on + strand, within HP15_151at 152.707 kb on + strand, within HP15_151at 152.724 kb on + strand, within HP15_151at 152.778 kb on - strandat 152.868 kb on - strandat 152.947 kb on - strand, within HP15_152at 152.957 kb on - strand, within HP15_152at 152.959 kb on + strand, within HP15_152at 152.986 kb on - strand, within HP15_152at 153.075 kb on - strand, within HP15_152at 153.152 kb on - strandat 153.173 kb on - strandat 153.199 kb on - strandat 153.248 kb on - strand, within HP15_153at 153.286 kb on + strand, within HP15_153at 153.316 kb on - strand, within HP15_153at 153.388 kb on - strand, within HP15_153at 153.464 kb on + strand, within HP15_153at 153.464 kb on + strand, within HP15_153at 153.469 kb on + strand, within HP15_153at 153.472 kb on - strand, within HP15_153at 153.472 kb on - strand, within HP15_153at 153.472 kb on - strand, within HP15_153at 153.512 kb on + strand, within HP15_153at 153.640 kb on + strand, within HP15_153at 153.640 kb on + strand, within HP15_153at 153.648 kb on - strand, within HP15_153at 153.724 kb on + strand, within HP15_153at 153.732 kb on - strand, within HP15_153at 153.732 kb on - strand, within HP15_153at 153.827 kb on + strand, within HP15_153

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Paraquat dichloride 0.002 mg/ml
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150,848 - HP15_149 0.20 -0.8
150,849 - HP15_149 0.20 -0.8
150,915 + HP15_149 0.28 -0.3
150,943 + HP15_149 0.32 +0.0
150,953 - HP15_149 0.33 -0.3
150,953 - HP15_149 0.33 +0.6
151,014 + HP15_149 0.41 +1.0
151,014 + HP15_149 0.41 -0.3
151,014 + HP15_149 0.41 +1.5
151,022 - HP15_149 0.42 +0.2
151,024 + HP15_149 0.42 -0.2
151,024 + HP15_149 0.42 +0.4
151,024 + HP15_149 0.42 +0.8
151,032 - HP15_149 0.43 -2.1
151,032 - HP15_149 0.43 +0.3
151,032 - HP15_149 0.43 +0.1
151,032 - HP15_149 0.43 +0.0
151,067 - HP15_149 0.47 +0.7
151,148 + HP15_149 0.57 +0.1
151,196 + HP15_149 0.64 -0.0
151,276 + HP15_149 0.74 +0.3
151,276 + HP15_149 0.74 -0.3
151,284 - HP15_149 0.75 -0.4
151,286 + HP15_149 0.75 -0.0
151,286 + HP15_149 0.75 -3.4
151,341 + HP15_149 0.82 +0.3
151,347 + HP15_149 0.83 +0.6
151,372 + HP15_149 0.86 -0.1
151,380 - HP15_149 0.87 +0.2
151,380 - HP15_149 0.87 +0.5
151,411 + -1.9
151,421 + -0.0
151,429 - +1.2
151,429 - +0.1
151,447 + -2.5
151,474 + -0.5
151,645 + HP15_150 0.56 -0.0
151,673 - HP15_150 0.68 -0.2
151,677 + HP15_150 0.69 -0.1
151,766 + -0.1
151,801 - +0.4
151,838 - +0.3
151,905 - HP15_151 0.10 +0.4
151,912 + HP15_151 0.11 +0.4
151,920 - HP15_151 0.11 -1.0
152,032 + HP15_151 0.22 -1.3
152,104 - HP15_151 0.28 +1.0
152,221 + HP15_151 0.39 +0.1
152,225 + HP15_151 0.39 -0.6
152,251 + HP15_151 0.42 -0.8
152,259 - HP15_151 0.43 +0.4
152,281 - HP15_151 0.45 +0.7
152,311 + HP15_151 0.47 -0.3
152,311 + HP15_151 0.47 -0.6
152,319 - HP15_151 0.48 -1.6
152,319 - HP15_151 0.48 -1.8
152,319 - HP15_151 0.48 +0.4
152,437 + HP15_151 0.59 -0.1
152,452 + HP15_151 0.60 +0.3
152,452 + HP15_151 0.60 -0.6
152,570 + HP15_151 0.71 -0.1
152,707 + HP15_151 0.84 +0.4
152,724 + HP15_151 0.85 -0.2
152,778 - +1.1
152,868 - +0.5
152,947 - HP15_152 0.24 -0.5
152,957 - HP15_152 0.28 +0.1
152,959 + HP15_152 0.29 +1.7
152,986 - HP15_152 0.40 -0.4
153,075 - HP15_152 0.78 +0.7
153,152 - -0.4
153,173 - -0.5
153,199 - +0.4
153,248 - HP15_153 0.15 -1.2
153,286 + HP15_153 0.20 -0.1
153,316 - HP15_153 0.24 +1.4
153,388 - HP15_153 0.33 -0.2
153,464 + HP15_153 0.43 +1.0
153,464 + HP15_153 0.43 +0.4
153,469 + HP15_153 0.43 -0.2
153,472 - HP15_153 0.44 +0.4
153,472 - HP15_153 0.44 -0.7
153,472 - HP15_153 0.44 +0.2
153,512 + HP15_153 0.49 -0.1
153,640 + HP15_153 0.65 +0.8
153,640 + HP15_153 0.65 +0.6
153,648 - HP15_153 0.66 -0.4
153,724 + HP15_153 0.75 +0.6
153,732 - HP15_153 0.76 +0.5
153,732 - HP15_153 0.76 +0.2
153,827 + HP15_153 0.88 +0.3

Or see this region's nucleotide sequence