Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c15010

Experiment: m.b. Phosphomycin 1 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Phosphomycin 1 mg/ml
1,558,276	+				-0.8
1,558,339	+				+3.1
1,558,438	+		PGA1_c15000	0.13	-1.7
1,558,438	+		PGA1_c15000	0.13	-0.3
1,558,496	-		PGA1_c15000	0.20	-0.7
1,558,497	+		PGA1_c15000	0.20	-0.0
1,558,505	-		PGA1_c15000	0.21	-1.1
1,558,521	+		PGA1_c15000	0.23	-0.5
1,558,521	+		PGA1_c15000	0.23	+1.2
1,558,521	+		PGA1_c15000	0.23	+1.3
1,558,521	+		PGA1_c15000	0.23	-0.5
1,558,529	-		PGA1_c15000	0.24	-0.2
1,558,529	-		PGA1_c15000	0.24	-0.6
1,558,529	-		PGA1_c15000	0.24	+0.7
1,558,529	-		PGA1_c15000	0.24	+0.4
1,558,529	-		PGA1_c15000	0.24	-0.0
1,558,529	-		PGA1_c15000	0.24	+0.9
1,558,529	-		PGA1_c15000	0.24	-1.6
1,558,539	-		PGA1_c15000	0.25	+0.3
1,558,591	-		PGA1_c15000	0.32	-0.2
1,558,609	-		PGA1_c15000	0.34	+0.2
1,558,649	+		PGA1_c15000	0.38	+0.6
1,558,701	+		PGA1_c15000	0.45	+0.3
1,558,828	-		PGA1_c15000	0.60	-0.6
1,558,840	+		PGA1_c15000	0.61	+0.9
1,558,979	+		PGA1_c15000	0.78	+0.3
1,558,979	+		PGA1_c15000	0.78	+1.0
1,558,987	-		PGA1_c15000	0.79	-0.8
1,559,059	-		PGA1_c15000	0.88	+0.6
1,559,079	-				+0.3
1,559,096	+				+1.2
1,559,234	-				+0.6
1,559,244	+				-0.4
1,559,249	+				+0.3
1,559,252	-				-1.9
1,559,252	-				-0.2
1,559,252	-				+0.5
1,559,280	+				+0.1
1,559,288	-				-0.4
1,559,289	+				-4.2
1,559,292	-				+0.3
1,559,362	+				-1.4
1,559,385	-				-1.5
1,559,497	-		PGA1_c15010	0.12	-1.3
1,559,512	+		PGA1_c15010	0.13	-2.4
1,559,551	+		PGA1_c15010	0.15	-0.7
1,559,551	+		PGA1_c15010	0.15	-2.6
1,559,556	+		PGA1_c15010	0.15	-1.8
1,559,559	-		PGA1_c15010	0.16	-1.6
1,559,564	-		PGA1_c15010	0.16	-1.1
1,559,701	+		PGA1_c15010	0.23	-2.1
1,559,738	+		PGA1_c15010	0.25	-0.9
1,559,814	+		PGA1_c15010	0.30	-0.4
1,559,828	+		PGA1_c15010	0.30	-3.9
1,559,908	+		PGA1_c15010	0.35	-1.7
1,559,908	+		PGA1_c15010	0.35	-2.1
1,559,908	+		PGA1_c15010	0.35	-1.6
1,559,908	+		PGA1_c15010	0.35	-3.4
1,559,908	+		PGA1_c15010	0.35	-2.9
1,559,916	-		PGA1_c15010	0.35	-3.5
1,559,936	-		PGA1_c15010	0.36	-2.4
1,559,936	-		PGA1_c15010	0.36	-0.9
1,559,941	-		PGA1_c15010	0.37	-2.7
1,560,045	-		PGA1_c15010	0.42	-2.2
1,560,097	-		PGA1_c15010	0.45	-1.7
1,560,097	-		PGA1_c15010	0.45	-2.7
1,560,124	-		PGA1_c15010	0.47	-1.7
1,560,186	+		PGA1_c15010	0.50	-2.7
1,560,254	-		PGA1_c15010	0.54	-1.9
1,560,280	+		PGA1_c15010	0.55	-0.8
1,560,334	+		PGA1_c15010	0.58	-3.1
1,560,434	+		PGA1_c15010	0.64	-2.1
1,560,434	+		PGA1_c15010	0.64	+0.6
1,560,435	+		PGA1_c15010	0.64	-2.1
1,560,441	+		PGA1_c15010	0.64	-3.0
1,560,442	-		PGA1_c15010	0.64	-0.7
1,560,442	-		PGA1_c15010	0.64	-2.2
1,560,526	+		PGA1_c15010	0.69	-1.7
1,560,536	-		PGA1_c15010	0.69	-2.2
1,560,544	+		PGA1_c15010	0.70	+0.9
1,560,549	+		PGA1_c15010	0.70	-2.6
1,560,559	+		PGA1_c15010	0.70	-2.5
1,560,567	-		PGA1_c15010	0.71	-2.3
1,560,671	+		PGA1_c15010	0.77	-2.4
1,560,679	-		PGA1_c15010	0.77	-2.8
1,560,699	-		PGA1_c15010	0.78	+0.9
1,560,815	+		PGA1_c15010	0.84	-4.1
1,560,835	-		PGA1_c15010	0.85	-0.3
1,560,908	+		PGA1_c15010	0.89	-2.2
1,561,056	-				-1.7
1,561,058	+				-1.2
1,561,058	+				-1.6
1,561,061	-				-1.7
1,561,066	-				-2.9
1,561,178	+				-0.0
1,561,326	-				-0.4
1,561,347	-				+0.1
1,561,444	+				-0.0
1,561,460	-				+0.3
1,561,495	-				-0.6
1,561,553	-				+0.2
1,561,590	+		PGA1_c15020	0.12	-0.0
1,561,590	+		PGA1_c15020	0.12	+0.3
1,561,608	-		PGA1_c15020	0.15	+0.9
1,561,614	+		PGA1_c15020	0.16	+0.6
1,561,657	+		PGA1_c15020	0.21	+2.4
1,561,657	+		PGA1_c15020	0.21	+0.5
1,561,693	+		PGA1_c15020	0.26	+0.2
1,561,705	+		PGA1_c15020	0.27	-0.4
1,561,723	+		PGA1_c15020	0.30	-0.7
1,561,836	+		PGA1_c15020	0.44	+0.7
1,561,837	-		PGA1_c15020	0.44	-0.6
1,561,837	-		PGA1_c15020	0.44	+0.9
1,561,881	+		PGA1_c15020	0.50	-2.4
1,561,889	-		PGA1_c15020	0.51	+0.6
1,561,918	+		PGA1_c15020	0.55	-0.3
1,562,010	-		PGA1_c15020	0.67	+0.6
1,562,068	-		PGA1_c15020	0.74	-0.6