Strain Fitness in Shewanella amazonensis SB2B around Sama_3582

Experiment: a-Ketoglutaric

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric
4,216,135	-				-2.0
4,216,140	+				+1.3
4,216,277	+		Sama_3581	0.12	+0.2
4,216,278	-		Sama_3581	0.12	+0.5
4,216,278	-		Sama_3581	0.12	+2.8
4,216,278	-		Sama_3581	0.12	+1.2
4,216,283	-		Sama_3581	0.13	+0.5
4,216,283	-		Sama_3581	0.13	-1.9
4,216,337	-		Sama_3581	0.19	-0.3
4,216,350	+		Sama_3581	0.20	-1.6
4,216,351	-		Sama_3581	0.20	-0.0
4,216,357	+		Sama_3581	0.21	-1.1
4,216,357	+		Sama_3581	0.21	-1.2
4,216,357	+		Sama_3581	0.21	-0.1
4,216,357	+		Sama_3581	0.21	+0.6
4,216,357	+		Sama_3581	0.21	-0.7
4,216,357	+		Sama_3581	0.21	-0.1
4,216,357	+		Sama_3581	0.21	-1.1
4,216,358	-		Sama_3581	0.21	+0.2
4,216,358	-		Sama_3581	0.21	-1.1
4,216,358	-		Sama_3581	0.21	+1.8
4,216,414	-		Sama_3581	0.27	-2.3
4,216,414	-		Sama_3581	0.27	-1.5
4,216,414	-		Sama_3581	0.27	+0.5
4,216,450	+		Sama_3581	0.31	-1.3
4,216,450	+		Sama_3581	0.31	+0.4
4,216,459	+		Sama_3581	0.32	+0.3
4,216,459	+		Sama_3581	0.32	-0.1
4,216,494	+		Sama_3581	0.35	+0.1
4,216,495	-		Sama_3581	0.35	+0.6
4,216,495	-		Sama_3581	0.35	+0.7
4,216,495	-		Sama_3581	0.35	-1.3
4,216,534	+		Sama_3581	0.40	-0.5
4,216,535	-		Sama_3581	0.40	+0.9
4,216,535	-		Sama_3581	0.40	+2.4
4,216,557	+		Sama_3581	0.42	+0.7
4,216,557	+		Sama_3581	0.42	-1.7
4,216,557	+		Sama_3581	0.42	-2.6
4,216,557	+		Sama_3581	0.42	-1.2
4,216,557	+		Sama_3581	0.42	-0.6
4,216,557	+		Sama_3581	0.42	+0.8
4,216,558	-		Sama_3581	0.42	+0.7
4,216,640	+		Sama_3581	0.51	+0.1
4,216,655	+		Sama_3581	0.53	+0.7
4,216,655	+		Sama_3581	0.53	-0.2
4,216,710	-		Sama_3581	0.58	+2.5
4,216,775	+		Sama_3581	0.65	+0.5
4,216,775	+		Sama_3581	0.65	-0.1
4,216,776	-		Sama_3581	0.65	-1.7
4,216,776	-		Sama_3581	0.65	-1.8
4,216,805	+		Sama_3581	0.68	+0.5
4,216,805	+		Sama_3581	0.68	-0.8
4,216,805	+		Sama_3581	0.68	-1.1
4,216,806	-		Sama_3581	0.69	-0.2
4,216,806	-		Sama_3581	0.69	+0.1
4,216,873	-		Sama_3581	0.76	+1.7
4,216,873	-		Sama_3581	0.76	+0.4
4,216,873	-		Sama_3581	0.76	-2.7
4,216,873	-		Sama_3581	0.76	-0.3
4,216,917	+		Sama_3581	0.80	-1.7
4,216,917	+		Sama_3581	0.80	+0.7
4,216,918	-		Sama_3581	0.81	-0.7
4,216,918	-		Sama_3581	0.81	-2.7
4,216,935	+		Sama_3581	0.82	-1.3
4,216,943	+		Sama_3581	0.83	+0.1
4,216,944	-		Sama_3581	0.83	+0.5
4,216,944	-		Sama_3581	0.83	+0.6
4,216,944	-		Sama_3581	0.83	-0.8
4,216,944	-		Sama_3581	0.83	+0.4
4,216,961	+		Sama_3581	0.85	+1.5
4,216,961	+		Sama_3581	0.85	+0.1
4,216,962	-		Sama_3581	0.85	+0.7
4,216,962	-		Sama_3581	0.85	+2.5
4,216,977	+		Sama_3581	0.87	+1.1
4,216,979	+		Sama_3581	0.87	-0.7
4,216,979	+		Sama_3581	0.87	+0.4
4,216,979	+		Sama_3581	0.87	+0.7
4,216,980	-		Sama_3581	0.87	-0.8
4,216,980	-		Sama_3581	0.87	-0.0
4,217,050	+				-0.3
4,217,050	+				+0.4
4,217,050	+				-0.3
4,217,050	+				+0.9
4,217,050	+				-0.3
4,217,051	-				-0.1
4,217,051	-				+1.1
4,217,120	+				-1.3
4,217,121	-				+3.4
4,217,121	-				+1.0
4,217,121	-				-2.2
4,217,140	-				+0.2
4,217,161	-		Sama_3582	0.10	+0.5
4,217,183	+		Sama_3582	0.16	-0.8
4,217,183	+		Sama_3582	0.16	-2.0
4,217,183	+		Sama_3582	0.16	+0.1
4,217,183	+		Sama_3582	0.16	-2.3
4,217,183	+		Sama_3582	0.16	-0.3
4,217,184	-		Sama_3582	0.16	-0.7
4,217,184	-		Sama_3582	0.16	+0.4
4,217,184	-		Sama_3582	0.16	-1.3
4,217,184	-		Sama_3582	0.16	+0.4
4,217,184	-		Sama_3582	0.16	+1.5
4,217,184	-		Sama_3582	0.16	-0.6
4,217,184	-		Sama_3582	0.16	+0.8
4,217,184	-		Sama_3582	0.16	-2.2
4,217,187	+		Sama_3582	0.17	+0.7
4,217,187	+		Sama_3582	0.17	-1.0
4,217,187	+		Sama_3582	0.17	-1.3
4,217,187	+		Sama_3582	0.17	+2.2
4,217,187	+		Sama_3582	0.17	-2.6
4,217,187	+		Sama_3582	0.17	+1.0
4,217,187	+		Sama_3582	0.17	-0.1
4,217,187	+		Sama_3582	0.17	-1.2
4,217,187	+		Sama_3582	0.17	-3.5
4,217,187	+		Sama_3582	0.17	-0.2
4,217,188	-		Sama_3582	0.17	-2.6
4,217,188	-		Sama_3582	0.17	-1.5
4,217,188	-		Sama_3582	0.17	-0.2
4,217,188	-		Sama_3582	0.17	-2.1
4,217,194	+		Sama_3582	0.18	-0.4
4,217,206	+		Sama_3582	0.21	-2.3
4,217,206	+		Sama_3582	0.21	+0.6
4,217,206	+		Sama_3582	0.21	+1.2
4,217,206	+		Sama_3582	0.21	-1.3
4,217,206	+		Sama_3582	0.21	-0.1
4,217,206	+		Sama_3582	0.21	+0.2
4,217,206	+		Sama_3582	0.21	+0.5
4,217,207	-		Sama_3582	0.22	-0.8
4,217,207	-		Sama_3582	0.22	-1.4
4,217,207	-		Sama_3582	0.22	-0.7
4,217,209	-		Sama_3582	0.22	+1.7
4,217,209	-		Sama_3582	0.22	-1.1
4,217,227	-		Sama_3582	0.26	-2.3
4,217,259	+		Sama_3582	0.34	-1.8
4,217,265	+		Sama_3582	0.36	-0.3
4,217,265	+		Sama_3582	0.36	-1.6
4,217,265	+		Sama_3582	0.36	-1.1
4,217,266	-		Sama_3582	0.36	+0.4
4,217,266	-		Sama_3582	0.36	-0.3
4,217,266	-		Sama_3582	0.36	+1.1
4,217,333	+		Sama_3582	0.52	+0.9
4,217,333	+		Sama_3582	0.52	-0.5
4,217,334	-		Sama_3582	0.53	-1.2
4,217,352	+		Sama_3582	0.57	+0.7
4,217,353	-		Sama_3582	0.57	-0.2
4,217,353	-		Sama_3582	0.57	-1.7
4,217,406	+		Sama_3582	0.70	-0.5
4,217,406	+		Sama_3582	0.70	-2.0
4,217,406	+		Sama_3582	0.70	+0.2
4,217,407	-		Sama_3582	0.71	-1.8
4,217,407	-		Sama_3582	0.71	-0.8
4,217,407	-		Sama_3582	0.71	+0.2
4,217,541	+				-1.1
4,217,541	+				-3.6
4,217,541	+				-0.2
4,217,541	+				-1.3
4,217,541	+				-0.5
4,217,541	+				+3.1
4,217,541	+				+1.6
4,217,541	+				-2.4
4,217,541	+				-1.0
4,217,541	+				-0.4
4,217,542	-				-2.4
4,217,542	-				-1.3
4,217,542	-				-1.8
4,217,542	-				+1.5
4,217,542	-				+0.4
4,217,542	-				+1.6
4,217,542	-				+2.3
4,217,542	-				+2.4
4,217,577	+				+1.5
4,217,578	-				+0.2
4,217,578	-				-0.9
4,217,578	-				-0.1
4,217,603	-				+1.8
4,217,603	-				-1.1
4,217,632	+				+0.9
4,217,662	+				+1.6
4,217,662	+				-1.3
4,217,719	+				+1.0
4,217,719	+				-0.8
4,217,719	+				-1.1
4,217,719	+				-1.8
4,217,719	+				-2.5
4,217,719	+				-0.2
4,217,720	-				-0.5
4,217,720	-				+0.6
4,217,720	-				+1.0
4,217,720	-				+0.7
4,217,720	-				+1.0
4,217,720	-				+0.1
4,217,720	-				-1.4
4,217,720	-				+0.3
4,217,720	-				-0.5
4,217,775	+		Sama_3583	0.18	+1.5
4,217,775	+		Sama_3583	0.18	+1.0
4,217,775	+		Sama_3583	0.18	+0.1
4,217,775	+		Sama_3583	0.18	-2.0
4,217,775	+		Sama_3583	0.18	-1.1
4,217,775	+		Sama_3583	0.18	+0.9
4,217,775	+		Sama_3583	0.18	-0.1
4,217,776	-		Sama_3583	0.19	+1.4
4,217,776	-		Sama_3583	0.19	-1.1
4,217,776	-		Sama_3583	0.19	+1.2
4,217,776	-		Sama_3583	0.19	+0.4
4,217,776	-		Sama_3583	0.19	+0.7
4,217,776	-		Sama_3583	0.19	-1.4
4,217,805	+		Sama_3583	0.27	-0.5
4,217,805	+		Sama_3583	0.27	-2.5
4,217,805	+		Sama_3583	0.27	+0.5
4,217,806	-		Sama_3583	0.28	-0.3
4,217,806	-		Sama_3583	0.28	+0.3
4,217,806	-		Sama_3583	0.28	-1.5
4,217,806	-		Sama_3583	0.28	-2.3
4,217,806	-		Sama_3583	0.28	-0.1
4,217,806	-		Sama_3583	0.28	-1.7
4,217,806	-		Sama_3583	0.28	+0.7
4,217,844	+		Sama_3583	0.39	+0.5
4,217,845	-		Sama_3583	0.39	-2.9
4,217,873	+		Sama_3583	0.48	-1.4
4,217,873	+		Sama_3583	0.48	+0.4
4,217,873	+		Sama_3583	0.48	+0.3
4,217,874	-		Sama_3583	0.48	-0.1
4,217,874	-		Sama_3583	0.48	+0.2
4,217,902	-		Sama_3583	0.56	-0.5
4,217,992	+		Sama_3583	0.83	-1.2
4,217,993	-		Sama_3583	0.84	+1.1
4,218,041	-				-2.8
4,218,098	+				-0.7
4,218,099	-				-0.3
4,218,111	+				-1.9
4,218,119	-				+1.6
4,218,119	-				-1.6
4,218,209	+		Sama_3584	0.28	-1.0
4,218,213	+		Sama_3584	0.29	+0.2
4,218,213	+		Sama_3584	0.29	-0.9
4,218,213	+		Sama_3584	0.29	+2.4
4,218,213	+		Sama_3584	0.29	+1.2
4,218,213	+		Sama_3584	0.29	+1.5
4,218,213	+		Sama_3584	0.29	-0.7
4,218,213	+		Sama_3584	0.29	-0.1
4,218,213	+		Sama_3584	0.29	+1.8
4,218,213	+		Sama_3584	0.29	-0.4
4,218,214	-		Sama_3584	0.30	-0.1
4,218,214	-		Sama_3584	0.30	+1.0
4,218,214	-		Sama_3584	0.30	-0.4
4,218,214	-		Sama_3584	0.30	+1.9
4,218,271	-		Sama_3584	0.47	-2.2
4,218,411	+				-1.5
4,218,411	+				-0.7
4,218,411	+				-0.3
4,218,412	-				+1.5
4,218,426	+				-0.2
4,218,427	-				+0.2
4,218,427	-				-1.7
4,218,446	+				+0.3
4,218,447	-				+1.3
4,218,447	-				+0.7
4,218,447	-				+0.9
4,218,461	+				+0.3
4,218,461	+				-2.7
4,218,462	-				-0.2
4,218,492	-				-3.4
4,218,492	-				+0.1
4,218,492	-				-0.2
4,218,492	-				-1.1
4,218,492	-				+1.2
4,218,515	+				-0.1
4,218,515	+				+0.3