Strain Fitness in Shewanella amazonensis SB2B around Sama_3491

Experiment: a-Ketoglutaric

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric
4,121,323	+				-0.6
4,121,323	+				+1.7
4,121,323	+				+0.9
4,121,323	+				+1.8
4,121,324	-				+0.3
4,121,324	-				-2.0
4,121,324	-				+0.6
4,121,324	-				-0.5
4,121,324	-				-1.5
4,121,324	-				-1.1
4,121,325	+				-0.8
4,121,325	+				+0.6
4,121,325	+				+1.4
4,121,326	-				-2.0
4,121,326	-				+2.0
4,121,374	+		Sama_3490	0.12	-0.3
4,121,375	-		Sama_3490	0.12	+0.1
4,121,375	-		Sama_3490	0.12	-2.8
4,121,375	-		Sama_3490	0.12	-0.0
4,121,375	-		Sama_3490	0.12	+2.0
4,121,385	+		Sama_3490	0.13	-1.8
4,121,385	+		Sama_3490	0.13	+0.4
4,121,386	-		Sama_3490	0.13	+1.1
4,121,442	+		Sama_3490	0.19	-0.4
4,121,442	+		Sama_3490	0.19	-3.5
4,121,443	-		Sama_3490	0.19	+0.1
4,121,443	-		Sama_3490	0.19	+1.6
4,121,443	-		Sama_3490	0.19	+0.9
4,121,443	-		Sama_3490	0.19	+0.2
4,121,443	-		Sama_3490	0.19	-1.3
4,121,485	+		Sama_3490	0.23	-2.8
4,121,485	+		Sama_3490	0.23	+0.4
4,121,486	-		Sama_3490	0.23	-0.4
4,121,486	-		Sama_3490	0.23	-2.6
4,121,486	-		Sama_3490	0.23	-2.4
4,121,486	-		Sama_3490	0.23	-0.8
4,121,507	+		Sama_3490	0.25	-0.5
4,121,507	+		Sama_3490	0.25	+0.5
4,121,508	-		Sama_3490	0.26	+1.2
4,121,528	+		Sama_3490	0.28	-0.2
4,121,528	+		Sama_3490	0.28	+1.7
4,121,529	-		Sama_3490	0.28	+1.9
4,121,529	-		Sama_3490	0.28	-0.5
4,121,529	-		Sama_3490	0.28	+1.1
4,121,536	+		Sama_3490	0.28	+0.2
4,121,570	+		Sama_3490	0.32	+0.8
4,121,570	+		Sama_3490	0.32	-0.8
4,121,570	+		Sama_3490	0.32	-0.8
4,121,570	+		Sama_3490	0.32	-2.4
4,121,571	-		Sama_3490	0.32	+0.9
4,121,571	-		Sama_3490	0.32	-1.7
4,121,571	-		Sama_3490	0.32	-0.1
4,121,571	-		Sama_3490	0.32	-1.0
4,121,571	-		Sama_3490	0.32	+1.2
4,121,574	+		Sama_3490	0.32	+0.6
4,121,574	+		Sama_3490	0.32	+0.7
4,121,575	-		Sama_3490	0.32	-2.0
4,121,575	-		Sama_3490	0.32	-0.0
4,121,645	+		Sama_3490	0.39	-1.5
4,121,645	+		Sama_3490	0.39	-0.3
4,121,646	-		Sama_3490	0.40	+0.2
4,121,646	-		Sama_3490	0.40	+1.0
4,121,646	-		Sama_3490	0.40	+0.0
4,121,673	+		Sama_3490	0.42	+0.8
4,121,674	-		Sama_3490	0.42	-0.6
4,121,678	+		Sama_3490	0.43	+4.5
4,121,678	+		Sama_3490	0.43	+1.0
4,121,680	-		Sama_3490	0.43	+1.1
4,121,701	+		Sama_3490	0.45	-0.2
4,121,701	+		Sama_3490	0.45	+0.6
4,121,701	+		Sama_3490	0.45	+0.2
4,121,702	-		Sama_3490	0.45	+0.3
4,121,702	-		Sama_3490	0.45	-0.2
4,121,755	+		Sama_3490	0.51	-0.1
4,121,756	-		Sama_3490	0.51	-0.2
4,121,922	+		Sama_3490	0.68	-2.6
4,121,923	-		Sama_3490	0.68	-0.1
4,121,957	-		Sama_3490	0.71	-0.4
4,121,957	-		Sama_3490	0.71	+0.6
4,121,957	-		Sama_3490	0.71	+1.5
4,121,975	+		Sama_3490	0.73	-0.5
4,121,975	+		Sama_3490	0.73	-1.8
4,121,975	+		Sama_3490	0.73	-2.6
4,121,975	+		Sama_3490	0.73	-2.7
4,121,975	+		Sama_3490	0.73	-0.4
4,121,975	+		Sama_3490	0.73	+1.5
4,121,975	+		Sama_3490	0.73	-2.2
4,121,975	+		Sama_3490	0.73	+2.6
4,121,976	-		Sama_3490	0.73	-1.5
4,121,976	-		Sama_3490	0.73	+1.6
4,121,976	-		Sama_3490	0.73	+0.2
4,121,976	-		Sama_3490	0.73	-2.2
4,121,976	-		Sama_3490	0.73	+0.6
4,121,976	-		Sama_3490	0.73	-0.2
4,121,976	-		Sama_3490	0.73	-2.3
4,121,976	-		Sama_3490	0.73	+1.7
4,121,976	-		Sama_3490	0.73	+0.6
4,122,006	+		Sama_3490	0.76	-2.3
4,122,044	+		Sama_3490	0.80	-0.1
4,122,044	+		Sama_3490	0.80	-0.1
4,122,057	+		Sama_3490	0.81	+0.1
4,122,058	-		Sama_3490	0.81	-0.4
4,122,058	-		Sama_3490	0.81	+1.2
4,122,058	-		Sama_3490	0.81	-1.1
4,122,058	-		Sama_3490	0.81	-0.2
4,122,123	+		Sama_3490	0.88	-1.8
4,122,210	+				-1.5
4,122,211	-				+1.6
4,122,211	-				+2.5
4,122,211	-				-2.6
4,122,213	+				-0.6
4,122,213	+				-2.1
4,122,213	+				-0.3
4,122,213	+				+0.0
4,122,217	+				-1.7
4,122,217	+				-0.8
4,122,217	+				-0.8
4,122,217	+				-0.5
4,122,218	-				+1.2
4,122,218	-				-0.6
4,122,231	+				-2.0
4,122,232	-				-0.9
4,122,232	-				-1.4
4,122,254	+				-2.5
4,122,254	+				-2.6
4,122,255	-				+0.6
4,122,255	-				-0.8
4,122,275	+				-1.3
4,122,275	+				-0.2
4,122,275	+				-2.0
4,122,301	+				-2.1
4,122,315	+				+0.5
4,122,316	-				+0.0
4,122,400	+		Sama_3491	0.16	-1.1
4,122,488	+		Sama_3491	0.26	+1.0
4,122,489	-		Sama_3491	0.26	-2.8
4,122,489	-		Sama_3491	0.26	+0.7
4,122,513	+		Sama_3491	0.29	+0.6
4,122,513	+		Sama_3491	0.29	+0.7
4,122,513	+		Sama_3491	0.29	+0.2
4,122,513	+		Sama_3491	0.29	-0.2
4,122,513	+		Sama_3491	0.29	+0.8
4,122,513	+		Sama_3491	0.29	-0.0
4,122,513	+		Sama_3491	0.29	-1.8
4,122,513	+		Sama_3491	0.29	-1.7
4,122,513	+		Sama_3491	0.29	+1.2
4,122,513	+		Sama_3491	0.29	-0.6
4,122,513	+		Sama_3491	0.29	-0.9
4,122,513	+		Sama_3491	0.29	-0.6
4,122,513	+		Sama_3491	0.29	-0.1
4,122,514	-		Sama_3491	0.29	-2.6
4,122,514	-		Sama_3491	0.29	-2.4
4,122,514	-		Sama_3491	0.29	+0.1
4,122,514	-		Sama_3491	0.29	+1.2
4,122,514	-		Sama_3491	0.29	+0.9
4,122,514	-		Sama_3491	0.29	-0.5
4,122,514	-		Sama_3491	0.29	+0.9
4,122,514	-		Sama_3491	0.29	-2.3
4,122,514	-		Sama_3491	0.29	-2.2
4,122,514	-		Sama_3491	0.29	+0.7
4,122,515	+		Sama_3491	0.29	-2.4
4,122,561	-		Sama_3491	0.34	-0.0
4,122,603	+		Sama_3491	0.39	+1.0
4,122,604	-		Sama_3491	0.39	+0.7
4,122,604	-		Sama_3491	0.39	+1.7
4,122,657	+		Sama_3491	0.45	+1.6
4,122,657	+		Sama_3491	0.45	-1.8
4,122,657	+		Sama_3491	0.45	-0.4
4,122,657	+		Sama_3491	0.45	-0.5
4,122,657	+		Sama_3491	0.45	+0.6
4,122,657	+		Sama_3491	0.45	-2.2
4,122,658	-		Sama_3491	0.45	-0.4
4,122,658	-		Sama_3491	0.45	+0.0
4,122,658	-		Sama_3491	0.45	-0.9
4,122,669	+		Sama_3491	0.46	+0.3
4,122,669	+		Sama_3491	0.46	+0.4
4,122,669	+		Sama_3491	0.46	-0.7
4,122,669	+		Sama_3491	0.46	+0.1
4,122,670	-		Sama_3491	0.46	-1.4
4,122,670	-		Sama_3491	0.46	-2.1
4,122,670	-		Sama_3491	0.46	-2.0
4,122,670	-		Sama_3491	0.46	+1.7
4,122,670	-		Sama_3491	0.46	+0.4
4,122,670	-		Sama_3491	0.46	+0.4
4,122,679	-		Sama_3491	0.47	-2.7
4,122,679	-		Sama_3491	0.47	-1.7
4,122,742	+		Sama_3491	0.54	-1.1
4,122,800	+		Sama_3491	0.61	-0.3
4,122,800	+		Sama_3491	0.61	-2.9
4,122,800	+		Sama_3491	0.61	+0.5
4,122,800	+		Sama_3491	0.61	+1.0
4,122,800	+		Sama_3491	0.61	+0.0
4,122,801	-		Sama_3491	0.61	-2.3
4,122,801	-		Sama_3491	0.61	-1.7
4,122,801	-		Sama_3491	0.61	+1.1
4,122,803	+		Sama_3491	0.61	+1.0
4,122,803	+		Sama_3491	0.61	+0.5
4,122,803	+		Sama_3491	0.61	+0.5
4,122,804	-		Sama_3491	0.61	-1.7
4,122,804	-		Sama_3491	0.61	-2.4
4,122,845	-		Sama_3491	0.66	-1.5
4,122,845	-		Sama_3491	0.66	-0.9
4,122,845	-		Sama_3491	0.66	+3.1
4,122,845	-		Sama_3491	0.66	+0.5
4,122,845	-		Sama_3491	0.66	+0.9
4,122,861	+		Sama_3491	0.67	-2.2
4,122,862	-		Sama_3491	0.67	+0.1
4,122,912	-		Sama_3491	0.73	+1.4
4,122,912	-		Sama_3491	0.73	-2.2
4,122,923	+		Sama_3491	0.74	-1.7
4,122,924	-		Sama_3491	0.74	-3.0
4,122,924	-		Sama_3491	0.74	-2.1
4,122,933	+		Sama_3491	0.75	+1.1
4,122,933	+		Sama_3491	0.75	+0.6
4,122,933	+		Sama_3491	0.75	-2.0
4,122,934	-		Sama_3491	0.75	-0.2
4,122,937	+		Sama_3491	0.76	-1.7
4,122,938	+		Sama_3491	0.76	-0.3
4,122,938	+		Sama_3491	0.76	+0.1
4,122,938	+		Sama_3491	0.76	-0.5
4,122,938	+		Sama_3491	0.76	+0.8
4,122,938	+		Sama_3491	0.76	-0.4
4,122,939	-		Sama_3491	0.76	-0.6
4,122,939	-		Sama_3491	0.76	+1.5
4,122,939	-		Sama_3491	0.76	+0.6
4,122,939	-		Sama_3491	0.76	+1.0
4,122,970	+		Sama_3491	0.79	-0.8
4,122,970	+		Sama_3491	0.79	-1.8
4,122,971	-		Sama_3491	0.80	-1.7
4,122,971	-		Sama_3491	0.80	+0.3
4,122,996	+		Sama_3491	0.82	+0.7
4,122,996	+		Sama_3491	0.82	-2.2
4,122,996	+		Sama_3491	0.82	+0.1
4,122,996	+		Sama_3491	0.82	-0.6
4,122,996	+		Sama_3491	0.82	+0.2
4,122,997	-		Sama_3491	0.82	+0.3
4,122,997	-		Sama_3491	0.82	-0.8
4,122,997	-		Sama_3491	0.82	-1.1
4,122,997	-		Sama_3491	0.82	-0.2
4,122,997	-		Sama_3491	0.82	+0.5
4,123,023	-		Sama_3491	0.85	-0.1
4,123,031	+		Sama_3491	0.86	-0.1
4,123,035	+		Sama_3491	0.87	+0.6
4,123,035	+		Sama_3491	0.87	-2.2
4,123,035	+		Sama_3491	0.87	-1.5
4,123,035	+		Sama_3491	0.87	+0.6
4,123,035	+		Sama_3491	0.87	+1.2
4,123,035	+		Sama_3491	0.87	-1.1
4,123,036	-		Sama_3491	0.87	+0.7
4,123,036	-		Sama_3491	0.87	-1.1
4,123,036	-		Sama_3491	0.87	-0.5
4,123,036	-		Sama_3491	0.87	-0.1
4,123,036	-		Sama_3491	0.87	-0.6
4,123,052	+		Sama_3491	0.89	-3.0
4,123,052	+		Sama_3491	0.89	+0.6
4,123,052	+		Sama_3491	0.89	-2.4
4,123,052	+		Sama_3491	0.89	+1.9
4,123,052	+		Sama_3491	0.89	-0.1
4,123,052	+		Sama_3491	0.89	+0.5
4,123,053	-		Sama_3491	0.89	+2.3
4,123,053	-		Sama_3491	0.89	+0.7
4,123,053	-		Sama_3491	0.89	+0.2
4,123,053	-		Sama_3491	0.89	+1.0
4,123,053	-		Sama_3491	0.89	-0.3
4,123,053	-		Sama_3491	0.89	-1.6
4,123,056	+		Sama_3491	0.89	-0.1
4,123,056	+		Sama_3491	0.89	-1.1
4,123,056	+		Sama_3491	0.89	-0.7
4,123,056	+		Sama_3491	0.89	-2.2
4,123,056	+		Sama_3491	0.89	-1.3
4,123,056	+		Sama_3491	0.89	-0.2
4,123,056	+		Sama_3491	0.89	+0.8
4,123,056	+		Sama_3491	0.89	-1.1
4,123,057	-		Sama_3491	0.89	+1.9
4,123,057	-		Sama_3491	0.89	+0.7
4,123,057	-		Sama_3491	0.89	-0.3
4,123,057	-		Sama_3491	0.89	-1.1
4,123,057	-		Sama_3491	0.89	-2.8
4,123,057	-		Sama_3491	0.89	-0.1
4,123,100	+				-1.0
4,123,101	-				-0.9
4,123,101	-				+0.5
4,123,101	-				-1.1
4,123,104	+				+1.1
4,123,104	+				+0.5
4,123,104	+				+0.9
4,123,104	+				+1.3
4,123,104	+				-1.0
4,123,104	+				-0.8
4,123,105	-				+0.1
4,123,105	-				-0.1
4,123,105	-				+0.7
4,123,105	-				-2.1
4,123,105	-				+0.0
4,123,105	-				+0.9
4,123,105	-				+2.3
4,123,124	+				-2.2
4,123,125	-				+1.2
4,123,146	+				+1.0
4,123,146	+				+1.3
4,123,146	+				-0.1
4,123,146	+				+2.0
4,123,146	+				+0.7
4,123,146	+				-1.0
4,123,146	+				+0.7
4,123,146	+				-2.4
4,123,146	+				+0.8
4,123,147	-				-1.5
4,123,147	-				-3.3
4,123,147	-				+0.4
4,123,147	-				+1.0
4,123,147	-				+2.2
4,123,147	-				+1.3
4,123,147	-				-3.6
4,123,147	-				-0.6
4,123,147	-				-3.9
4,123,147	-				+0.9
4,123,150	+				+0.8
4,123,150	+				-0.2
4,123,150	+				-0.1
4,123,150	+				+0.0
4,123,150	+				+0.0
4,123,150	+				-2.1
4,123,150	+				+0.2
4,123,150	+				+1.5
4,123,150	+				+0.9
4,123,150	+				+0.4
4,123,150	+				-0.1
4,123,150	+				+1.2
4,123,150	+				+2.7
4,123,150	+				-1.3
4,123,150	+				+0.7
4,123,151	-				+1.3
4,123,151	-				+0.8
4,123,151	-				-1.2
4,123,151	-				-0.3
4,123,151	-				+1.0
4,123,151	-				+1.2
4,123,151	-				-1.5
4,123,151	-				+1.9
4,123,151	-				-1.3
4,123,151	-				-1.7
4,123,151	-				+0.1
4,123,151	-				-0.6
4,123,151	-				+0.3
4,123,151	-				-1.1
4,123,151	-				-0.7
4,123,151	-				+1.0
4,123,151	-				-2.3
4,123,151	-				+0.8
4,123,152	+				-0.3
4,123,152	+				+0.2
4,123,152	+				+0.3
4,123,152	+				-0.9
4,123,152	+				-1.4
4,123,152	+				+0.5
4,123,152	+				-2.1
4,123,153	-				-0.8
4,123,153	-				+0.3
4,123,153	-				+1.5
4,123,153	-				+0.2
4,123,153	-				-3.3
4,123,227	+		Sama_3492	0.10	+0.8
4,123,228	-		Sama_3492	0.10	+0.5
4,123,280	+		Sama_3492	0.18	-1.8
4,123,280	+		Sama_3492	0.18	+0.8
4,123,280	+		Sama_3492	0.18	-2.6
4,123,280	+		Sama_3492	0.18	+0.7
4,123,280	+		Sama_3492	0.18	-1.8
4,123,280	+		Sama_3492	0.18	-2.1
4,123,281	-		Sama_3492	0.19	-0.2
4,123,281	-		Sama_3492	0.19	-1.0
4,123,281	-		Sama_3492	0.19	-2.5
4,123,305	+		Sama_3492	0.22	-0.8
4,123,306	-		Sama_3492	0.22	+0.2
4,123,315	+		Sama_3492	0.24	+0.6
4,123,316	-		Sama_3492	0.24	+0.7
4,123,391	+		Sama_3492	0.36	-0.4
4,123,392	-		Sama_3492	0.36	+1.5
4,123,532	+		Sama_3492	0.58	-0.5
4,123,533	-		Sama_3492	0.58	+0.5
4,123,587	+		Sama_3492	0.67	-1.7
4,123,587	+		Sama_3492	0.67	-2.8
4,123,587	+		Sama_3492	0.67	-0.0
4,123,587	+		Sama_3492	0.67	-0.5
4,123,587	+		Sama_3492	0.67	-0.8
4,123,587	+		Sama_3492	0.67	-0.1
4,123,587	+		Sama_3492	0.67	-2.1
4,123,587	+		Sama_3492	0.67	-0.5
4,123,588	-		Sama_3492	0.67	+0.7
4,123,588	-		Sama_3492	0.67	+0.6
4,123,588	-		Sama_3492	0.67	-1.3
4,123,588	-		Sama_3492	0.67	+0.1
4,123,588	-		Sama_3492	0.67	+0.1
4,123,588	-		Sama_3492	0.67	-1.7
4,123,589	+		Sama_3492	0.67	-0.8
4,123,589	+		Sama_3492	0.67	-1.4
4,123,590	-		Sama_3492	0.67	-0.5
4,123,619	+		Sama_3492	0.72	-0.5
4,123,619	+		Sama_3492	0.72	-0.1
4,123,619	+		Sama_3492	0.72	-0.2
4,123,619	+		Sama_3492	0.72	+0.7
4,123,619	+		Sama_3492	0.72	-1.2
4,123,619	+		Sama_3492	0.72	-0.7
4,123,619	+		Sama_3492	0.72	-1.3
4,123,619	+		Sama_3492	0.72	-0.1
4,123,619	+		Sama_3492	0.72	-2.0
4,123,619	+		Sama_3492	0.72	-1.5
4,123,620	-		Sama_3492	0.72	+1.0
4,123,620	-		Sama_3492	0.72	+2.6
4,123,620	-		Sama_3492	0.72	-1.8
4,123,620	-		Sama_3492	0.72	+0.4
4,123,620	-		Sama_3492	0.72	-1.3
4,123,629	+		Sama_3492	0.73	-0.1
4,123,629	+		Sama_3492	0.73	-0.1
4,123,629	+		Sama_3492	0.73	-0.5
4,123,629	+		Sama_3492	0.73	-2.5
4,123,629	+		Sama_3492	0.73	-1.8
4,123,629	+		Sama_3492	0.73	-1.6
4,123,629	+		Sama_3492	0.73	-0.6
4,123,629	+		Sama_3492	0.73	-3.3
4,123,629	+		Sama_3492	0.73	-1.5
4,123,629	+		Sama_3492	0.73	+1.5
4,123,630	-		Sama_3492	0.73	+1.7
4,123,630	-		Sama_3492	0.73	-0.5
4,123,630	-		Sama_3492	0.73	-1.5
4,123,630	-		Sama_3492	0.73	+0.7
4,123,630	-		Sama_3492	0.73	-0.1
4,123,630	-		Sama_3492	0.73	-0.0
4,123,630	-		Sama_3492	0.73	+1.8
4,123,630	-		Sama_3492	0.73	-1.7
4,123,630	-		Sama_3492	0.73	+1.2
4,123,630	-		Sama_3492	0.73	-0.5
4,123,630	-		Sama_3492	0.73	+1.5
4,123,630	-		Sama_3492	0.73	-0.9
4,123,700	+		Sama_3492	0.84	+0.3
4,123,701	-		Sama_3492	0.85	+1.2
4,123,746	+				-0.5
4,123,746	+				-2.2
4,123,747	-				-2.2
4,123,747	-				-2.1
4,123,747	-				-0.9
4,123,747	-				-2.4
4,123,771	+				-1.0
4,123,771	+				-1.2
4,123,771	+				-0.7
4,123,772	-				+0.3
4,123,772	-				+1.5
4,123,806	-				-3.3
4,123,806	-				-1.8
4,123,806	-				-2.0
4,123,888	+				+1.9
4,123,888	+				-0.8
4,123,889	-				-1.1
4,123,917	+				-0.6
4,123,917	+				+0.2
4,123,917	+				-1.7
4,123,918	-				+0.7
4,123,918	-				-0.1
4,123,918	-				-2.2
4,123,930	+				-0.1
4,123,930	+				+0.3
4,123,930	+				-1.5
4,123,966	+				+1.7
4,123,966	+				+1.1
4,123,966	+				+0.4
4,123,966	+				+0.6
4,123,966	+				-0.4
4,123,967	-				+0.2
4,123,967	-				-0.4
4,123,967	-				-2.7
4,123,967	-				+0.5
4,123,967	-				-1.8
4,123,967	-				-0.4
4,123,967	-				+0.2
4,123,967	-				-2.6
4,123,967	-				-1.3
4,123,967	-				+0.1
4,123,983	+				-1.7
4,123,983	+				+0.9
4,124,014	+		Sama_3493	0.17	-1.8
4,124,023	+		Sama_3493	0.20	+1.1
4,124,023	+		Sama_3493	0.20	+0.5
4,124,023	+		Sama_3493	0.20	-2.7
4,124,023	+		Sama_3493	0.20	+1.1
4,124,027	+		Sama_3493	0.21	-1.3
4,124,028	-		Sama_3493	0.22	+0.5
4,124,028	-		Sama_3493	0.22	+0.7
4,124,038	-		Sama_3493	0.25	+0.1