Strain Fitness in Shewanella amazonensis SB2B around Sama_3266

Experiment: a-Ketoglutaric

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric
3,876,673	+		Sama_3265	0.63	+2.0
3,876,720	+		Sama_3265	0.64	+0.4
3,876,720	+		Sama_3265	0.64	+0.9
3,876,720	+		Sama_3265	0.64	+0.4
3,876,751	-		Sama_3265	0.66	+0.9
3,876,769	+		Sama_3265	0.66	+0.2
3,876,770	-		Sama_3265	0.66	-1.6
3,876,775	+		Sama_3265	0.66	+0.1
3,876,775	+		Sama_3265	0.66	+1.3
3,876,845	+		Sama_3265	0.69	+1.7
3,876,845	+		Sama_3265	0.69	-2.0
3,876,845	+		Sama_3265	0.69	-0.2
3,876,845	+		Sama_3265	0.69	-0.7
3,876,845	+		Sama_3265	0.69	-2.3
3,876,846	-		Sama_3265	0.69	-0.9
3,876,846	-		Sama_3265	0.69	+0.4
3,876,846	-		Sama_3265	0.69	-1.2
3,876,846	-		Sama_3265	0.69	+2.9
3,876,846	-		Sama_3265	0.69	+0.6
3,876,846	-		Sama_3265	0.69	+1.2
3,876,846	-		Sama_3265	0.69	+0.4
3,876,875	+		Sama_3265	0.70	+0.7
3,876,875	+		Sama_3265	0.70	-0.1
3,876,875	+		Sama_3265	0.70	+1.6
3,876,875	+		Sama_3265	0.70	+1.4
3,876,875	+		Sama_3265	0.70	+0.0
3,876,875	+		Sama_3265	0.70	-2.1
3,876,875	+		Sama_3265	0.70	+1.1
3,876,875	+		Sama_3265	0.70	-3.8
3,876,875	+		Sama_3265	0.70	+0.2
3,876,875	+		Sama_3265	0.70	+0.8
3,876,875	+		Sama_3265	0.70	-1.2
3,876,875	+		Sama_3265	0.70	+1.0
3,876,876	-		Sama_3265	0.70	-2.9
3,876,876	-		Sama_3265	0.70	+0.9
3,876,876	-		Sama_3265	0.70	+2.0
3,876,876	-		Sama_3265	0.70	-1.2
3,876,876	-		Sama_3265	0.70	+0.6
3,876,876	-		Sama_3265	0.70	+0.9
3,876,876	-		Sama_3265	0.70	-3.4
3,876,876	-		Sama_3265	0.70	+0.2
3,876,876	-		Sama_3265	0.70	+1.4
3,876,876	-		Sama_3265	0.70	+3.4
3,876,876	-		Sama_3265	0.70	-0.3
3,876,876	-		Sama_3265	0.70	+0.4
3,876,876	-		Sama_3265	0.70	+1.9
3,876,876	-		Sama_3265	0.70	-0.6
3,876,876	-		Sama_3265	0.70	+0.9
3,876,876	-		Sama_3265	0.70	-0.2
3,876,876	-		Sama_3265	0.70	+0.5
3,876,876	-		Sama_3265	0.70	-0.6
3,876,921	+		Sama_3265	0.72	-1.1
3,876,921	+		Sama_3265	0.72	+0.7
3,876,922	-		Sama_3265	0.72	-1.6
3,876,922	-		Sama_3265	0.72	+2.1
3,876,936	+		Sama_3265	0.73	-0.7
3,876,936	+		Sama_3265	0.73	-1.0
3,876,968	+		Sama_3265	0.74	-0.4
3,876,969	-		Sama_3265	0.74	-1.0
3,876,969	-		Sama_3265	0.74	-2.2
3,877,019	+		Sama_3265	0.76	-1.0
3,877,026	+		Sama_3265	0.76	+0.2
3,877,026	+		Sama_3265	0.76	-1.3
3,877,027	-		Sama_3265	0.76	-2.8
3,877,075	+		Sama_3265	0.78	-2.2
3,877,075	+		Sama_3265	0.78	+0.4
3,877,075	+		Sama_3265	0.78	+1.0
3,877,075	+		Sama_3265	0.78	+0.8
3,877,075	+		Sama_3265	0.78	+1.3
3,877,075	+		Sama_3265	0.78	-0.6
3,877,075	+		Sama_3265	0.78	-1.8
3,877,075	+		Sama_3265	0.78	+0.0
3,877,075	+		Sama_3265	0.78	-1.0
3,877,076	-		Sama_3265	0.78	-1.5
3,877,076	-		Sama_3265	0.78	-0.4
3,877,080	+		Sama_3265	0.78	-1.8
3,877,080	+		Sama_3265	0.78	-1.4
3,877,080	+		Sama_3265	0.78	-0.2
3,877,080	+		Sama_3265	0.78	+1.4
3,877,080	+		Sama_3265	0.78	+0.8
3,877,080	+		Sama_3265	0.78	-1.8
3,877,080	+		Sama_3265	0.78	+0.2
3,877,080	+		Sama_3265	0.78	-1.3
3,877,080	+		Sama_3265	0.78	+0.9
3,877,080	+		Sama_3265	0.78	+0.7
3,877,080	+		Sama_3265	0.78	+0.4
3,877,080	+		Sama_3265	0.78	+2.1
3,877,080	+		Sama_3265	0.78	-1.9
3,877,080	+		Sama_3265	0.78	+0.4
3,877,081	-		Sama_3265	0.78	-1.5
3,877,081	-		Sama_3265	0.78	+0.5
3,877,081	-		Sama_3265	0.78	-0.1
3,877,081	-		Sama_3265	0.78	-2.0
3,877,081	-		Sama_3265	0.78	-1.6
3,877,081	-		Sama_3265	0.78	-1.0
3,877,081	-		Sama_3265	0.78	-0.1
3,877,081	-		Sama_3265	0.78	+0.1
3,877,081	-		Sama_3265	0.78	-0.4
3,877,081	-		Sama_3265	0.78	-0.6
3,877,081	-		Sama_3265	0.78	+0.0
3,877,081	-		Sama_3265	0.78	+0.8
3,877,084	+		Sama_3265	0.78	+0.7
3,877,084	+		Sama_3265	0.78	-1.4
3,877,106	-		Sama_3265	0.79	-1.9
3,877,106	-		Sama_3265	0.79	+1.2
3,877,106	-		Sama_3265	0.79	-0.2
3,877,106	-		Sama_3265	0.79	-3.4
3,877,281	+		Sama_3265	0.86	+0.1
3,877,281	+		Sama_3265	0.86	+1.1
3,877,282	-		Sama_3265	0.86	-3.1
3,877,391	+				-0.2
3,877,392	-				-0.5
3,877,392	-				-1.0
3,877,392	-				+0.6
3,877,392	-				-1.0
3,877,434	+				-1.2
3,877,482	+				-1.8
3,877,482	+				+1.3
3,877,482	+				+1.3
3,877,482	+				-0.4
3,877,482	+				-0.1
3,877,482	+				+1.0
3,877,482	+				-1.4
3,877,483	-				-0.5
3,877,483	-				+0.8
3,877,483	-				-0.3
3,877,483	-				+0.1
3,877,487	-				+0.8
3,877,549	+				+0.2
3,877,549	+				+0.9
3,877,549	+				+0.2
3,877,549	+				-2.3
3,877,550	-				+0.6
3,877,583	-				+1.7
3,877,611	+				-1.1
3,877,611	+				+0.6
3,877,611	+				-0.4
3,877,611	+				-3.0
3,877,611	+				+0.2
3,877,611	+				-1.0
3,877,611	+				-3.8
3,877,612	-				+0.1
3,877,612	-				-0.1
3,877,612	-				-1.1
3,877,612	-				-0.2
3,877,612	-				+0.7
3,877,657	-				-0.8
3,878,797	+		Sama_3266	0.57	-0.4
3,879,677	-				+0.6
3,879,714	+				+0.2
3,879,714	+				-0.2
3,879,714	+				+0.1
3,879,714	+				+0.4
3,879,715	-				+0.0
3,879,715	-				-1.2
3,879,715	-				+0.2
3,879,715	-				+0.7
3,879,731	+				-0.3
3,879,731	+				-0.1
3,879,732	-				-1.8
3,879,774	+				+0.5
3,879,798	+				+0.9
3,879,811	+				-0.8
3,879,811	+				-2.1
3,879,812	-				+0.4
3,879,812	-				-0.8
3,879,820	+				-1.2
3,879,820	+				-1.6
3,879,820	+				-0.2
3,879,820	+				+0.9
3,879,932	+		Sama_3267	0.21	+0.8
3,879,932	+		Sama_3267	0.21	-2.3
3,879,932	+		Sama_3267	0.21	+1.4
3,879,933	-		Sama_3267	0.21	+0.7
3,879,933	-		Sama_3267	0.21	+0.9
3,880,024	+		Sama_3267	0.37	-0.5
3,880,025	-		Sama_3267	0.38	-0.6
3,880,118	+		Sama_3267	0.54	-1.0
3,880,118	+		Sama_3267	0.54	+2.6
3,880,118	+		Sama_3267	0.54	-2.3
3,880,118	+		Sama_3267	0.54	+1.0
3,880,118	+		Sama_3267	0.54	+2.4
3,880,191	+		Sama_3267	0.67	-0.2
3,880,191	+		Sama_3267	0.67	+0.1
3,880,338	+				-0.5
3,880,338	+				+0.2
3,880,338	+				-1.2
3,880,338	+				-1.4
3,880,338	+				-2.1
3,880,377	-				+0.8
3,880,389	+				+0.6
3,880,390	-				+0.5
3,880,390	-				+0.1
3,880,426	+				+0.2
3,880,427	-				+0.7
3,880,427	-				-1.4
3,880,460	+				-0.3
3,880,460	+				-0.0
3,880,460	+				+0.4
3,880,472	-				-2.8
3,880,502	+				-0.6
3,880,502	+				+2.9
3,880,503	-				-0.5
3,880,640	+		Sama_3268	0.22	-0.3
3,880,641	-		Sama_3268	0.22	-0.1
3,880,665	-		Sama_3268	0.24	+1.2