Strain Fitness in Shewanella amazonensis SB2B around Sama_1212

Experiment: a-Ketoglutaric

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Ketoglutaric
1,490,069	-		Sama_1211	0.53	-1.2
1,490,121	+		Sama_1211	0.56	-0.1
1,490,121	+		Sama_1211	0.56	+0.6
1,490,121	+		Sama_1211	0.56	-0.1
1,490,122	-		Sama_1211	0.56	+1.6
1,490,122	-		Sama_1211	0.56	-0.6
1,490,130	+		Sama_1211	0.56	+0.8
1,490,130	+		Sama_1211	0.56	-1.7
1,490,131	-		Sama_1211	0.56	-2.3
1,490,131	-		Sama_1211	0.56	-0.0
1,490,259	+		Sama_1211	0.63	-2.5
1,490,259	+		Sama_1211	0.63	-0.2
1,490,259	+		Sama_1211	0.63	-1.2
1,490,259	+		Sama_1211	0.63	-0.0
1,490,260	-		Sama_1211	0.63	-0.2
1,490,260	-		Sama_1211	0.63	-1.8
1,490,342	+		Sama_1211	0.67	-1.5
1,490,342	+		Sama_1211	0.67	+0.7
1,490,342	+		Sama_1211	0.67	+0.8
1,490,342	+		Sama_1211	0.67	-1.2
1,490,342	+		Sama_1211	0.67	+0.5
1,490,343	-		Sama_1211	0.67	+1.5
1,490,382	+		Sama_1211	0.69	+0.2
1,490,383	-		Sama_1211	0.69	+0.1
1,490,383	-		Sama_1211	0.69	-0.4
1,490,403	+		Sama_1211	0.70	-0.8
1,490,403	+		Sama_1211	0.70	-0.9
1,490,404	-		Sama_1211	0.70	-2.6
1,490,404	-		Sama_1211	0.70	-3.3
1,490,404	-		Sama_1211	0.70	+1.3
1,490,404	-		Sama_1211	0.70	+0.8
1,490,406	+		Sama_1211	0.70	-0.8
1,490,412	+		Sama_1211	0.71	-2.2
1,490,413	-		Sama_1211	0.71	+0.7
1,490,413	-		Sama_1211	0.71	+1.4
1,490,413	-		Sama_1211	0.71	-2.2
1,490,414	+		Sama_1211	0.71	-0.8
1,490,415	-		Sama_1211	0.71	-0.7
1,490,415	-		Sama_1211	0.71	-1.8
1,490,457	+		Sama_1211	0.73	-2.6
1,490,457	+		Sama_1211	0.73	-2.8
1,490,458	-		Sama_1211	0.73	+0.0
1,490,531	-		Sama_1211	0.77	+0.8
1,490,576	+		Sama_1211	0.79	-1.8
1,490,576	+		Sama_1211	0.79	-0.8
1,490,576	+		Sama_1211	0.79	-0.5
1,490,576	+		Sama_1211	0.79	-1.8
1,490,576	+		Sama_1211	0.79	+0.8
1,490,577	-		Sama_1211	0.79	-0.2
1,490,577	-		Sama_1211	0.79	-1.2
1,490,577	-		Sama_1211	0.79	-1.8
1,490,577	-		Sama_1211	0.79	-3.2
1,490,577	-		Sama_1211	0.79	-0.8
1,490,577	-		Sama_1211	0.79	-1.2
1,490,577	-		Sama_1211	0.79	-0.0
1,490,580	+		Sama_1211	0.79	+0.2
1,490,580	+		Sama_1211	0.79	-0.3
1,490,580	+		Sama_1211	0.79	-0.0
1,490,580	+		Sama_1211	0.79	-2.8
1,490,580	+		Sama_1211	0.79	-1.2
1,490,580	+		Sama_1211	0.79	-0.8
1,490,580	+		Sama_1211	0.79	+0.1
1,490,580	+		Sama_1211	0.79	-0.2
1,490,580	+		Sama_1211	0.79	+1.6
1,490,580	+		Sama_1211	0.79	+0.9
1,490,580	+		Sama_1211	0.79	+0.0
1,490,580	+		Sama_1211	0.79	+0.2
1,490,580	+		Sama_1211	0.79	-0.8
1,490,580	+		Sama_1211	0.79	-1.1
1,490,580	+		Sama_1211	0.79	+2.6
1,490,580	+		Sama_1211	0.79	-0.4
1,490,580	+		Sama_1211	0.79	-0.6
1,490,580	+		Sama_1211	0.79	-1.8
1,490,580	+		Sama_1211	0.79	-1.5
1,490,580	+		Sama_1211	0.79	-2.2
1,490,580	+		Sama_1211	0.79	+2.0
1,490,580	+		Sama_1211	0.79	+3.4
1,490,580	+		Sama_1211	0.79	+0.8
1,490,580	+		Sama_1211	0.79	+0.6
1,490,580	+		Sama_1211	0.79	-0.2
1,490,580	+		Sama_1211	0.79	+1.8
1,490,580	+		Sama_1211	0.79	+1.3
1,490,580	+		Sama_1211	0.79	+0.3
1,490,580	+		Sama_1211	0.79	+0.7
1,490,580	+		Sama_1211	0.79	-0.9
1,490,580	+		Sama_1211	0.79	-0.5
1,490,581	-		Sama_1211	0.80	-3.1
1,490,581	-		Sama_1211	0.80	-1.2
1,490,581	-		Sama_1211	0.80	+0.2
1,490,581	-		Sama_1211	0.80	+0.3
1,490,581	-		Sama_1211	0.80	+0.4
1,490,581	-		Sama_1211	0.80	-0.9
1,490,581	-		Sama_1211	0.80	-0.5
1,490,581	-		Sama_1211	0.80	-0.3
1,490,581	-		Sama_1211	0.80	-0.3
1,490,581	-		Sama_1211	0.80	-3.4
1,490,581	-		Sama_1211	0.80	-0.8
1,490,582	+		Sama_1211	0.80	-1.8
1,490,582	+		Sama_1211	0.80	+0.3
1,490,582	+		Sama_1211	0.80	-0.5
1,490,582	+		Sama_1211	0.80	-0.8
1,490,582	+		Sama_1211	0.80	+1.3
1,490,582	+		Sama_1211	0.80	-2.9
1,490,582	+		Sama_1211	0.80	-1.1
1,490,582	+		Sama_1211	0.80	-0.8
1,490,582	+		Sama_1211	0.80	+0.3
1,490,582	+		Sama_1211	0.80	+1.2
1,490,582	+		Sama_1211	0.80	-1.5
1,490,582	+		Sama_1211	0.80	+1.9
1,490,582	+		Sama_1211	0.80	-1.6
1,490,583	-		Sama_1211	0.80	+1.7
1,490,583	-		Sama_1211	0.80	-1.6
1,490,583	-		Sama_1211	0.80	+0.9
1,490,583	-		Sama_1211	0.80	-2.3
1,490,583	-		Sama_1211	0.80	-2.3
1,490,583	-		Sama_1211	0.80	-0.2
1,490,583	-		Sama_1211	0.80	+1.0
1,490,606	+		Sama_1211	0.81	+0.5
1,490,606	+		Sama_1211	0.81	-0.8
1,490,606	+		Sama_1211	0.81	-2.3
1,490,606	+		Sama_1211	0.81	-0.3
1,490,606	+		Sama_1211	0.81	-0.5
1,490,607	-		Sama_1211	0.81	-2.2
1,490,607	-		Sama_1211	0.81	-1.5
1,490,607	-		Sama_1211	0.81	+0.0
1,490,649	-		Sama_1211	0.83	-2.4
1,490,681	+		Sama_1211	0.85	-1.6
1,490,725	+		Sama_1211	0.87	+1.1
1,490,726	-		Sama_1211	0.87	-0.5
1,490,735	-		Sama_1211	0.88	-1.0
1,490,805	+				+0.1
1,490,806	-				-2.2
1,490,946	+				+0.0
1,490,947	-				+1.0
1,490,949	+				+0.7
1,490,949	+				+0.1
1,490,949	+				+0.5
1,490,949	+				-0.4
1,490,950	-				-1.5
1,490,950	-				+0.5
1,490,950	-				-0.6
1,490,950	-				+2.6
1,490,953	+				+1.8
1,490,953	+				-1.3
1,490,954	-				+1.0
1,490,954	-				+0.7
1,490,954	-				-0.8
1,490,967	+				+3.4
1,490,968	-				-0.5
1,490,968	-				-1.0
1,490,968	-				+1.7
1,491,011	-				+0.8
1,491,031	+				+0.1
1,491,031	+				+0.2
1,491,043	+				+1.3
1,491,043	+				-2.9
1,491,082	-				+0.9
1,491,082	-				+1.2
1,491,082	-				-0.2
1,491,127	+				+1.0
1,491,127	+				-1.5
1,491,128	-				-1.0
1,491,136	+				-0.5
1,491,136	+				+0.1
1,491,137	-				-0.4
1,491,178	+				+0.9
1,491,179	-				+1.1
1,491,188	-				+0.8
1,491,188	-				+1.3
1,491,188	-				-1.8
1,491,226	+		Sama_1212	0.11	-1.2
1,491,226	+		Sama_1212	0.11	+0.6
1,491,226	+		Sama_1212	0.11	+1.2
1,491,226	+		Sama_1212	0.11	+0.9
1,491,226	+		Sama_1212	0.11	-0.5
1,491,226	+		Sama_1212	0.11	-0.2
1,491,226	+		Sama_1212	0.11	-1.2
1,491,227	-		Sama_1212	0.11	+0.4
1,491,227	-		Sama_1212	0.11	-0.8
1,491,227	-		Sama_1212	0.11	+0.8
1,491,227	-		Sama_1212	0.11	+0.1
1,491,227	-		Sama_1212	0.11	-0.4
1,491,277	+		Sama_1212	0.13	-0.1
1,491,284	-		Sama_1212	0.14	-0.8
1,491,284	-		Sama_1212	0.14	-2.5
1,491,350	+		Sama_1212	0.17	+1.3
1,491,350	+		Sama_1212	0.17	+0.2
1,491,350	+		Sama_1212	0.17	-0.4
1,491,350	+		Sama_1212	0.17	-1.2
1,491,350	+		Sama_1212	0.17	+2.2
1,491,350	+		Sama_1212	0.17	-0.8
1,491,350	+		Sama_1212	0.17	-0.3
1,491,350	+		Sama_1212	0.17	+0.2
1,491,351	-		Sama_1212	0.17	+1.5
1,491,351	-		Sama_1212	0.17	-2.3
1,491,351	-		Sama_1212	0.17	-2.0
1,491,351	-		Sama_1212	0.17	+0.4
1,491,351	-		Sama_1212	0.17	+0.1
1,491,351	-		Sama_1212	0.17	-1.8
1,491,351	-		Sama_1212	0.17	-2.2
1,491,351	-		Sama_1212	0.17	+0.1
1,491,351	-		Sama_1212	0.17	+0.4
1,491,351	-		Sama_1212	0.17	-0.8
1,491,413	+		Sama_1212	0.20	-1.0
1,491,413	+		Sama_1212	0.20	+0.5
1,491,414	-		Sama_1212	0.20	+0.3
1,491,447	+		Sama_1212	0.21	+0.6
1,491,448	-		Sama_1212	0.21	-2.3
1,491,448	-		Sama_1212	0.21	-1.8
1,491,448	-		Sama_1212	0.21	+1.5
1,491,448	-		Sama_1212	0.21	-2.4
1,491,496	+		Sama_1212	0.24	+2.1
1,491,496	+		Sama_1212	0.24	-1.5
1,491,496	+		Sama_1212	0.24	-1.8
1,491,497	-		Sama_1212	0.24	+2.1
1,491,497	-		Sama_1212	0.24	-0.8
1,491,497	-		Sama_1212	0.24	+0.1
1,491,497	-		Sama_1212	0.24	-3.9
1,491,532	+		Sama_1212	0.25	+1.2
1,491,532	+		Sama_1212	0.25	+2.6
1,491,533	-		Sama_1212	0.25	+0.2
1,491,533	-		Sama_1212	0.25	+0.5
1,491,533	-		Sama_1212	0.25	-2.5
1,491,570	+		Sama_1212	0.27	+2.0
1,491,570	+		Sama_1212	0.27	+0.6
1,491,570	+		Sama_1212	0.27	-1.2
1,491,570	+		Sama_1212	0.27	+1.1
1,491,571	-		Sama_1212	0.27	+0.8
1,491,583	+		Sama_1212	0.28	-1.5
1,491,584	-		Sama_1212	0.28	-1.3
1,491,584	-		Sama_1212	0.28	-0.0
1,491,584	-		Sama_1212	0.28	+1.1
1,491,584	-		Sama_1212	0.28	-0.9
1,491,634	+		Sama_1212	0.30	+0.2
1,491,685	+		Sama_1212	0.33	-0.3
1,491,685	+		Sama_1212	0.33	-0.7
1,491,685	+		Sama_1212	0.33	-1.8
1,491,685	+		Sama_1212	0.33	+0.6
1,491,686	-		Sama_1212	0.33	-1.8
1,491,686	-		Sama_1212	0.33	+1.3
1,491,686	-		Sama_1212	0.33	-0.2
1,491,686	-		Sama_1212	0.33	-1.5
1,491,689	+		Sama_1212	0.33	-3.8
1,491,689	+		Sama_1212	0.33	-0.8
1,491,689	+		Sama_1212	0.33	-2.3
1,491,690	-		Sama_1212	0.33	-1.2
1,491,690	-		Sama_1212	0.33	-0.2
1,491,690	-		Sama_1212	0.33	-2.2
1,491,690	-		Sama_1212	0.33	-0.8
1,491,690	-		Sama_1212	0.33	+1.1
1,491,690	-		Sama_1212	0.33	-1.0
1,491,690	-		Sama_1212	0.33	+0.4
1,491,743	+		Sama_1212	0.35	+2.0
1,491,743	+		Sama_1212	0.35	+1.4
1,491,798	+		Sama_1212	0.38	-1.2
1,491,798	+		Sama_1212	0.38	-2.7
1,491,799	-		Sama_1212	0.38	-0.1
1,491,799	-		Sama_1212	0.38	-2.3
1,491,799	-		Sama_1212	0.38	-0.1
1,491,808	+		Sama_1212	0.39	-2.8
1,491,808	+		Sama_1212	0.39	-1.5
1,491,808	+		Sama_1212	0.39	-1.8
1,491,809	-		Sama_1212	0.39	-1.0
1,491,809	-		Sama_1212	0.39	-0.3
1,491,830	-		Sama_1212	0.40	-1.8
1,491,831	+		Sama_1212	0.40	-1.5
1,491,831	+		Sama_1212	0.40	+0.4
1,491,831	+		Sama_1212	0.40	-0.3
1,491,831	+		Sama_1212	0.40	-1.5
1,491,831	+		Sama_1212	0.40	+1.2
1,491,831	+		Sama_1212	0.40	+1.2
1,491,832	-		Sama_1212	0.40	+0.2
1,491,832	-		Sama_1212	0.40	+0.4
1,491,832	-		Sama_1212	0.40	-0.0
1,491,832	-		Sama_1212	0.40	-0.6
1,491,865	+		Sama_1212	0.41	-0.2
1,491,904	+		Sama_1212	0.43	-2.9
1,491,916	+		Sama_1212	0.44	-1.8
1,491,916	+		Sama_1212	0.44	-0.8
1,491,917	-		Sama_1212	0.44	-1.2
1,491,919	+		Sama_1212	0.44	-0.4
1,491,919	+		Sama_1212	0.44	+0.1
1,491,919	+		Sama_1212	0.44	-3.1
1,491,919	+		Sama_1212	0.44	-1.4
1,491,931	+		Sama_1212	0.44	-2.6
1,491,931	+		Sama_1212	0.44	+0.2
1,491,932	-		Sama_1212	0.44	+0.7
1,491,932	-		Sama_1212	0.44	-0.8
1,491,958	+		Sama_1212	0.46	+1.4
1,491,964	+		Sama_1212	0.46	+1.2
1,491,977	+		Sama_1212	0.47	-0.4
1,491,977	+		Sama_1212	0.47	-0.9
1,491,977	+		Sama_1212	0.47	-0.8
1,491,978	-		Sama_1212	0.47	+0.8
1,491,978	-		Sama_1212	0.47	-0.8
1,492,000	+		Sama_1212	0.48	+0.8
1,492,000	+		Sama_1212	0.48	-1.5
1,492,000	+		Sama_1212	0.48	-0.6
1,492,000	+		Sama_1212	0.48	+1.6
1,492,001	-		Sama_1212	0.48	+1.8
1,492,042	+		Sama_1212	0.50	-1.5
1,492,042	+		Sama_1212	0.50	+1.3
1,492,042	+		Sama_1212	0.50	+0.6
1,492,042	+		Sama_1212	0.50	-2.5
1,492,043	-		Sama_1212	0.50	-0.5
1,492,043	-		Sama_1212	0.50	+0.9
1,492,077	-		Sama_1212	0.51	+2.4
1,492,173	-		Sama_1212	0.56	-0.9
1,492,173	-		Sama_1212	0.56	+0.4
1,492,221	-		Sama_1212	0.58	+0.3
1,492,232	+		Sama_1212	0.59	+1.5
1,492,261	+		Sama_1212	0.60	+0.4
1,492,261	+		Sama_1212	0.60	-0.2
1,492,261	+		Sama_1212	0.60	-0.3
1,492,261	+		Sama_1212	0.60	-0.8
1,492,262	-		Sama_1212	0.60	+0.3
1,492,262	-		Sama_1212	0.60	-0.1
1,492,262	-		Sama_1212	0.60	+3.2
1,492,277	+		Sama_1212	0.61	+0.2
1,492,277	+		Sama_1212	0.61	-0.0
1,492,277	+		Sama_1212	0.61	-1.2
1,492,278	-		Sama_1212	0.61	-0.0
1,492,282	+		Sama_1212	0.61	+0.2
1,492,282	+		Sama_1212	0.61	+1.2
1,492,283	-		Sama_1212	0.61	+0.0
1,492,283	-		Sama_1212	0.61	-0.6
1,492,283	-		Sama_1212	0.61	+0.5
1,492,283	-		Sama_1212	0.61	+1.3
1,492,283	-		Sama_1212	0.61	+1.2
1,492,283	-		Sama_1212	0.61	-0.3
1,492,320	-		Sama_1212	0.63	+1.7
1,492,324	+		Sama_1212	0.63	+0.2
1,492,324	+		Sama_1212	0.63	-1.8
1,492,325	-		Sama_1212	0.63	-0.8
1,492,325	-		Sama_1212	0.63	+0.8
1,492,325	-		Sama_1212	0.63	-1.2
1,492,332	+		Sama_1212	0.64	+0.5
1,492,333	-		Sama_1212	0.64	-0.2
1,492,375	+		Sama_1212	0.66	-1.3
1,492,375	+		Sama_1212	0.66	+0.8
1,492,376	-		Sama_1212	0.66	-3.6
1,492,377	+		Sama_1212	0.66	-1.2
1,492,377	+		Sama_1212	0.66	+0.2
1,492,377	+		Sama_1212	0.66	-2.2
1,492,377	+		Sama_1212	0.66	+0.8
1,492,377	+		Sama_1212	0.66	+1.2
1,492,377	+		Sama_1212	0.66	+0.5
1,492,377	+		Sama_1212	0.66	+0.1
1,492,377	+		Sama_1212	0.66	+0.8
1,492,377	+		Sama_1212	0.66	-1.2
1,492,377	+		Sama_1212	0.66	-2.2
1,492,377	+		Sama_1212	0.66	-2.9
1,492,377	+		Sama_1212	0.66	-0.4
1,492,377	+		Sama_1212	0.66	-0.1
1,492,378	-		Sama_1212	0.66	-0.1
1,492,378	-		Sama_1212	0.66	+0.3
1,492,378	-		Sama_1212	0.66	-1.0
1,492,378	-		Sama_1212	0.66	+0.5
1,492,378	-		Sama_1212	0.66	-1.5
1,492,378	-		Sama_1212	0.66	-2.0
1,492,378	-		Sama_1212	0.66	-2.0
1,492,378	-		Sama_1212	0.66	-0.4
1,492,378	-		Sama_1212	0.66	-1.5
1,492,378	-		Sama_1212	0.66	-0.4
1,492,378	-		Sama_1212	0.66	+1.8
1,492,378	-		Sama_1212	0.66	+1.9
1,492,410	+		Sama_1212	0.67	-0.8
1,492,410	+		Sama_1212	0.67	-0.5
1,492,505	+		Sama_1212	0.72	-0.1
1,492,505	+		Sama_1212	0.72	+0.8
1,492,626	-		Sama_1212	0.78	-0.1
1,492,705	+		Sama_1212	0.81	-2.5
1,492,714	+		Sama_1212	0.82	-2.8
1,492,715	-		Sama_1212	0.82	-0.5
1,492,724	-		Sama_1212	0.82	-1.1
1,492,724	-		Sama_1212	0.82	-3.0
1,493,049	+				-0.2
1,493,049	+				+0.8
1,493,050	-				+1.2
1,493,061	+				-1.3
1,493,109	-				+1.1
1,493,169	+				-1.4
1,493,169	+				-1.2
1,493,169	+				+0.3
1,493,170	-				-3.0
1,493,170	-				+1.0
1,493,188	-				+0.4
1,493,271	+		Sama_1213	0.17	-0.6
1,493,328	+		Sama_1213	0.23	+1.2
1,493,328	+		Sama_1213	0.23	-2.0
1,493,388	-		Sama_1213	0.29	+1.4
1,493,416	-		Sama_1213	0.32	+1.2
1,493,416	-		Sama_1213	0.32	+2.2
1,493,538	+		Sama_1213	0.45	-1.1
1,493,538	+		Sama_1213	0.45	-0.1
1,493,539	-		Sama_1213	0.45	-3.2
1,493,539	-		Sama_1213	0.45	+0.3
1,493,539	-		Sama_1213	0.45	-0.2
1,493,586	+		Sama_1213	0.50	-1.4
1,493,586	+		Sama_1213	0.50	+0.5
1,493,587	-		Sama_1213	0.50	+1.1
1,493,652	+		Sama_1213	0.57	-0.3
1,493,652	+		Sama_1213	0.57	+1.6
1,493,652	+		Sama_1213	0.57	-1.0
1,493,652	+		Sama_1213	0.57	-2.2
1,493,652	+		Sama_1213	0.57	+0.8
1,493,653	-		Sama_1213	0.57	+0.7
1,493,769	+		Sama_1213	0.69	-3.7
1,493,770	-		Sama_1213	0.69	+0.1
1,493,912	+		Sama_1213	0.84	+1.1
1,493,913	-		Sama_1213	0.84	-0.3
1,494,069	+				+0.1
1,494,070	-				-0.5
1,494,070	-				-2.2
1,494,095	+				+2.1
1,494,095	+				+1.8
1,494,096	-				-0.6
1,494,096	-				-0.4