Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c29100

Experiment: m.b. benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.145 mg/ml
3,047,789	-		PGA1_c29080	0.45	+1.2
3,047,808	-		PGA1_c29080	0.49	+0.4
3,047,818	-		PGA1_c29080	0.51	+0.3
3,047,872	+		PGA1_c29080	0.61	-1.7
3,047,882	+		PGA1_c29080	0.63	+2.3
3,047,882	+		PGA1_c29080	0.63	+1.3
3,047,890	-		PGA1_c29080	0.65	+0.0
3,047,890	-		PGA1_c29080	0.65	+1.3
3,047,890	-		PGA1_c29080	0.65	+0.1
3,047,890	-		PGA1_c29080	0.65	+1.2
3,047,890	-		PGA1_c29080	0.65	-0.7
3,047,890	-		PGA1_c29080	0.65	-1.7
3,047,901	+		PGA1_c29080	0.67	-1.0
3,047,901	+		PGA1_c29080	0.67	+2.2
3,047,901	+		PGA1_c29080	0.67	-0.4
3,047,909	-		PGA1_c29080	0.69	+2.0
3,047,926	-		PGA1_c29080	0.72	+1.7
3,047,928	+		PGA1_c29080	0.72	-0.9
3,047,986	-		PGA1_c29080	0.84	+2.2
3,047,986	-		PGA1_c29080	0.84	+0.0
3,047,986	-		PGA1_c29080	0.84	-1.0
3,048,021	-				-0.4
3,048,064	+				+0.6
3,048,080	+				-0.4
3,048,090	+				+1.9
3,048,095	+				-3.0
3,048,098	-				+0.2
3,048,098	-				+0.4
3,048,238	+		PGA1_c29090	0.27	+0.9
3,048,529	+		PGA1_c29090	0.88	+0.6
3,048,542	-				+0.6
3,048,548	-				+0.2
3,048,595	+				+0.0
3,048,595	+				-0.3
3,048,595	+				+0.0
3,048,636	-				-0.9
3,048,701	+				-2.6
3,048,709	-				+0.8
3,048,720	+				+0.6
3,048,728	+				+1.2
3,048,821	-				+0.6
3,048,833	+				+1.0
3,048,852	-				+0.3
3,048,901	+				+3.4
3,048,959	-		PGA1_c29100	0.11	+1.6
3,049,003	+		PGA1_c29100	0.13	+0.6
3,049,099	-		PGA1_c29100	0.17	+2.2
3,049,275	-		PGA1_c29100	0.26	+1.8
3,049,279	-		PGA1_c29100	0.26	-0.6
3,049,298	-		PGA1_c29100	0.27	+1.1
3,049,377	-		PGA1_c29100	0.31	-0.2
3,049,425	-		PGA1_c29100	0.34	-0.4
3,049,455	-		PGA1_c29100	0.35	-0.4
3,049,499	+		PGA1_c29100	0.37	+0.0
3,049,507	-		PGA1_c29100	0.38	-0.1
3,049,529	+		PGA1_c29100	0.39	+1.5
3,049,529	+		PGA1_c29100	0.39	+0.0
3,049,537	-		PGA1_c29100	0.39	+1.2
3,049,537	-		PGA1_c29100	0.39	+1.1
3,049,619	+		PGA1_c29100	0.43	-1.9
3,049,627	-		PGA1_c29100	0.43	+0.9
3,049,627	-		PGA1_c29100	0.43	-1.2
3,049,687	-		PGA1_c29100	0.46	+1.4
3,049,715	-		PGA1_c29100	0.48	+0.6
3,049,730	-		PGA1_c29100	0.49	-0.4
3,049,777	-		PGA1_c29100	0.51	-1.4
3,049,823	+		PGA1_c29100	0.53	+2.6
3,049,900	+		PGA1_c29100	0.57	+0.0
3,049,905	+		PGA1_c29100	0.57	-1.2
3,049,934	+		PGA1_c29100	0.59	+1.8
3,049,934	+		PGA1_c29100	0.59	-2.7
3,049,934	+		PGA1_c29100	0.59	+0.2
3,049,942	-		PGA1_c29100	0.59	+0.4
3,049,948	-		PGA1_c29100	0.59	-0.0
3,049,980	+		PGA1_c29100	0.61	+0.2
3,049,991	-		PGA1_c29100	0.61	+0.6
3,050,037	+		PGA1_c29100	0.64	+0.6
3,050,104	+		PGA1_c29100	0.67	-0.0
3,050,264	+		PGA1_c29100	0.75	+3.6
3,050,264	+		PGA1_c29100	0.75	+0.0
3,050,289	-		PGA1_c29100	0.76	+1.0
3,050,304	-		PGA1_c29100	0.77	+0.0
3,050,379	-		PGA1_c29100	0.81	-0.4
3,050,438	-		PGA1_c29100	0.83	+2.0
3,050,457	-		PGA1_c29100	0.84	+0.7
3,050,563	-		PGA1_c29100	0.90	+0.6
3,050,605	+				-0.2
3,050,620	-				+1.6
3,050,620	-				+0.2
3,050,620	-				-1.4
3,050,620	-				+1.3
3,050,622	-				-0.1
3,050,632	-				+0.6
3,050,674	+				+2.4
3,050,676	-				-0.8
3,050,681	-				+0.0
3,050,974	+				+0.0
3,050,979	+				+0.6
3,050,979	+				+0.6
3,051,030	+		PGA1_c29110	0.18	+0.8
3,051,038	-		PGA1_c29110	0.19	+0.0
3,051,081	-		PGA1_c29110	0.27	-0.1
3,051,097	-		PGA1_c29110	0.30	+1.4
3,051,157	+		PGA1_c29110	0.41	+0.2
3,051,161	-		PGA1_c29110	0.41	+1.4
3,051,188	-		PGA1_c29110	0.46	-0.2
3,051,228	-		PGA1_c29110	0.53	+0.6
3,051,241	+		PGA1_c29110	0.56	+1.6
3,051,241	+		PGA1_c29110	0.56	-0.6
3,051,249	-		PGA1_c29110	0.57	+1.2
3,051,298	+		PGA1_c29110	0.66	+0.4
3,051,306	-		PGA1_c29110	0.68	+1.0
3,051,306	-		PGA1_c29110	0.68	+0.2
3,051,380	-		PGA1_c29110	0.81	+0.4
3,051,479	+				-0.4
3,051,493	-				+2.5
3,051,541	-				-1.0
3,051,561	-				-1.0
3,051,562	-				-2.0
3,051,636	-		PGA1_c29120	0.23	-0.4
3,051,636	-		PGA1_c29120	0.23	-1.7
3,051,660	-		PGA1_c29120	0.30	+1.0