Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c10980

Experiment: m.b. benzoic 0.145 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. benzoic 0.145 mg/ml
1,136,219	+		PGA1_c10970	0.34	+1.6
1,136,246	+		PGA1_c10970	0.36	-1.0
1,136,267	-		PGA1_c10970	0.38	+0.6
1,136,288	-		PGA1_c10970	0.40	-0.4
1,136,288	-		PGA1_c10970	0.40	+2.1
1,136,288	-		PGA1_c10970	0.40	+1.0
1,136,305	+		PGA1_c10970	0.41	-1.4
1,136,313	-		PGA1_c10970	0.42	+0.1
1,136,348	-		PGA1_c10970	0.45	-1.9
1,136,348	-		PGA1_c10970	0.45	-1.3
1,136,408	-		PGA1_c10970	0.51	+0.2
1,136,421	+		PGA1_c10970	0.52	+2.1
1,136,421	+		PGA1_c10970	0.52	+0.7
1,136,451	-		PGA1_c10970	0.55	+0.9
1,136,546	-		PGA1_c10970	0.63	+1.4
1,136,636	+				+0.9
1,136,830	+		PGA1_c10970	0.89	-1.4
1,136,860	+				+0.6
1,136,932	+				+1.0
1,136,979	+				+1.0
1,136,987	-				+1.2
1,136,987	-				+1.9
1,137,059	-				-0.0
1,137,113	+				+3.6
1,137,137	+				+1.1
1,137,137	+				+1.0
1,137,137	+				-0.4
1,137,140	-				+2.4
1,137,145	-				-0.9
1,137,145	-				+0.1
1,137,145	-				+0.8
1,137,145	-				+0.2
1,137,145	-				+2.4
1,137,145	-				-1.3
1,137,184	-				+1.6
1,137,202	-				+0.2
1,137,224	+				+2.4
1,137,306	-				+0.4
1,137,330	-		PGA1_c10980	0.11	+0.8
1,137,366	+		PGA1_c10980	0.14	+1.6
1,137,379	-		PGA1_c10980	0.15	-0.2
1,137,381	+		PGA1_c10980	0.16	-0.9
1,137,482	+		PGA1_c10980	0.24	-1.4
1,137,483	-		PGA1_c10980	0.24	+1.4
1,137,483	-		PGA1_c10980	0.24	+1.6
1,137,483	-		PGA1_c10980	0.24	+1.3
1,137,483	-		PGA1_c10980	0.24	+1.0
1,137,483	-		PGA1_c10980	0.24	+0.3
1,137,483	-		PGA1_c10980	0.24	-1.4
1,137,483	-		PGA1_c10980	0.24	-1.0
1,137,483	-		PGA1_c10980	0.24	+1.8
1,137,492	+		PGA1_c10980	0.25	+1.1
1,137,493	+		PGA1_c10980	0.25	-0.4
1,137,493	+				-0.4
1,137,501	-		PGA1_c10980	0.26	+0.2
1,137,501	-		PGA1_c10980	0.26	+1.6
1,137,501	-		PGA1_c10980	0.26	+1.1
1,137,516	+		PGA1_c10980	0.27	+1.4
1,137,522	-		PGA1_c10980	0.27	-1.0
1,137,546	+		PGA1_c10980	0.29	+1.1
1,137,614	-		PGA1_c10980	0.35	+0.8
1,137,743	+		PGA1_c10980	0.46	-1.0
1,137,750	+		PGA1_c10980	0.47	+2.1
1,137,755	-		PGA1_c10980	0.47	+1.3
1,137,821	-		PGA1_c10980	0.53	+1.0
1,137,886	-		PGA1_c10980	0.58	-1.4
1,137,895	+		PGA1_c10980	0.59	+2.4
1,137,927	+		PGA1_c10980	0.62	+1.0
1,137,963	+		PGA1_c10980	0.65	+0.3
1,138,015	-		PGA1_c10980	0.69	-1.4
1,138,035	-		PGA1_c10980	0.71	+0.8
1,138,091	+		PGA1_c10980	0.75	+1.1
1,138,171	+		PGA1_c10980	0.82	+0.6
1,138,238	-		PGA1_c10980	0.88	-2.4
1,138,293	+				-2.0
1,138,399	-				-0.0
1,138,404	-				-0.3
1,138,440	-				+0.6
1,138,557	-				+2.1
1,138,560	+				+0.6
1,138,568	-				+0.6
1,138,665	-				+0.6
1,138,680	-				+0.3
1,138,698	-				+1.6
1,138,780	-				+1.8
1,138,787	-				+0.3
1,138,852	+		PGA1_c10990	0.11	+0.6
1,138,908	+		PGA1_c10990	0.15	-1.0
1,138,908	+		PGA1_c10990	0.15	-1.4
1,138,908	+		PGA1_c10990	0.15	+2.6
1,138,916	-		PGA1_c10990	0.15	+0.6
1,138,916	-		PGA1_c10990	0.15	-2.0
1,138,952	+		PGA1_c10990	0.18	-0.4
1,138,959	-		PGA1_c10990	0.19	-1.0
1,139,000	+		PGA1_c10990	0.21	+2.9
1,139,017	+		PGA1_c10990	0.23	-0.0
1,139,081	+		PGA1_c10990	0.27	+0.6
1,139,160	+		PGA1_c10990	0.33	-1.0
1,139,160	+		PGA1_c10990	0.33	-1.3
1,139,160	+		PGA1_c10990	0.33	-0.4
1,139,251	-		PGA1_c10990	0.39	+0.4
1,139,376	+		PGA1_c10990	0.48	-0.4
1,139,381	+		PGA1_c10990	0.48	+1.6
1,139,381	+		PGA1_c10990	0.48	+1.6