Strain Fitness in Shewanella amazonensis SB2B around Sama_2518

Experiment: D-Maltose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose
3,024,258	+				+0.2
3,024,258	+				+1.0
3,024,258	+				+0.2
3,024,259	-				-1.7
3,024,263	+				-2.1
3,024,263	+				+0.6
3,024,263	+				-0.6
3,024,264	-				+0.2
3,024,264	-				+0.2
3,024,349	+				-1.0
3,024,350	-				+0.7
3,024,380	+				-1.0
3,024,381	-				-0.4
3,024,381	-				-0.3
3,024,384	-				+0.2
3,024,384	-				-0.6
3,024,384	-				-1.4
3,024,407	-				-0.3
3,024,407	-				-0.3
3,024,442	-				-0.6
3,024,442	-				-1.0
3,024,442	-				+0.8
3,024,444	-				-1.0
3,024,633	-				+0.6
3,024,633	-				-1.0
3,024,657	-				+0.3
3,024,657	-				+2.0
3,024,657	-				-0.3
3,024,657	-				-0.6
3,024,660	-				+0.0
3,024,660	-				+0.3
3,024,660	-				-2.6
3,024,660	-				-3.0
3,024,660	-				+0.6
3,024,718	-				-0.3
3,024,733	-				+0.4
3,024,733	-				-1.0
3,024,736	+				-1.3
3,024,737	-				-0.6
3,024,737	-				-1.0
3,024,737	-				+1.4
3,024,737	-				-0.8
3,024,737	-				-0.5
3,024,754	+				-0.2
3,024,768	-				+0.3
3,024,789	-				-0.6
3,024,789	-				+0.0
3,024,840	-				-1.2
3,024,840	-				-0.1
3,024,840	-				-0.6
3,024,840	-				-0.2
3,024,850	-				-0.4
3,024,850	-				+1.2
3,024,857	+				+0.9
3,024,858	-				-0.2
3,024,858	-				-0.4
3,024,858	-				+1.7
3,024,858	-				-0.4
3,024,858	-				-2.3
3,024,858	-				+0.3
3,024,858	-				-1.4
3,024,858	-				-0.4
3,024,858	-				+0.0
3,024,864	+				+0.3
3,024,865	-				+0.4
3,024,871	-				-1.8
3,024,871	-				+1.0
3,024,871	-				+1.0
3,024,871	-				-0.1
3,024,871	-				+0.4
3,024,871	-				+0.7
3,024,883	-				-1.5
3,024,883	-				-1.1
3,024,898	-				+1.1
3,024,898	-				+0.5
3,024,903	-				+0.3
3,024,903	-				+0.1
3,024,903	-				-0.1
3,024,932	-				-0.3
3,024,984	-				+0.9
3,024,984	-				-1.3
3,024,984	-				-0.9
3,025,002	-				-0.1
3,025,070	+				+0.2
3,025,070	+				-0.5
3,025,113	+				-0.1
3,025,132	+				+0.8
3,025,149	+				-0.4
3,025,150	-				-0.8
3,025,152	+				-1.3
3,025,235	+				+0.1
3,025,262	-				-1.7
3,025,266	+				+0.4
3,025,267	-				-0.5
3,025,267	-				+0.1
3,025,314	+				+0.6
3,025,314	+				+0.3
3,025,314	+				-0.3
3,025,314	+				+0.2
3,025,315	-				+0.2
3,025,315	-				+0.2
3,025,327	+				+0.8
3,025,327	+				+0.4
3,025,327	+				+0.2
3,025,327	+				-1.0
3,025,327	+				+0.6
3,025,328	-				-1.3
3,025,339	+				+0.9
3,025,339	+				-0.0
3,025,340	-				-0.8
3,025,340	-				-1.4
3,025,369	+				-0.1
3,025,439	-		Sama_2518	0.14	+1.6
3,025,454	+		Sama_2518	0.15	+1.7
3,025,454	+		Sama_2518	0.15	+0.3
3,025,454	+		Sama_2518	0.15	-0.5
3,025,454	+		Sama_2518	0.15	+0.1
3,025,455	-		Sama_2518	0.15	+2.4
3,025,455	-		Sama_2518	0.15	-0.3
3,025,455	-		Sama_2518	0.15	+0.9
3,025,455	-		Sama_2518	0.15	-0.7
3,025,535	+		Sama_2518	0.20	-0.4
3,025,536	-		Sama_2518	0.20	+0.2
3,025,536	-		Sama_2518	0.20	+2.7
3,025,599	+		Sama_2518	0.24	+0.8
3,025,599	+		Sama_2518	0.24	+1.6
3,025,677	-		Sama_2518	0.29	+0.4
3,025,802	-		Sama_2518	0.37	-1.0
3,025,826	+		Sama_2518	0.39	+0.3
3,025,834	+		Sama_2518	0.39	+0.8
3,025,897	+		Sama_2518	0.43	+0.9
3,025,898	-		Sama_2518	0.43	-0.2
3,025,956	+		Sama_2518	0.47	+0.4
3,025,957	-		Sama_2518	0.47	-0.8
3,025,957	-		Sama_2518	0.47	-0.1
3,025,957	-		Sama_2518	0.47	-0.0
3,025,957	-		Sama_2518	0.47	+0.7
3,025,957	-		Sama_2518	0.47	+0.3
3,025,957	-		Sama_2518	0.47	-0.2
3,026,014	-		Sama_2518	0.50	-0.2
3,026,014	-		Sama_2518	0.50	+0.1
3,026,014	-		Sama_2518	0.50	+0.1
3,026,014	-		Sama_2518	0.50	-1.4
3,026,014	-		Sama_2518	0.50	-0.2
3,026,135	-		Sama_2518	0.58	+0.6
3,026,164	-		Sama_2518	0.60	+0.8
3,026,164	-		Sama_2518	0.60	-0.0
3,026,188	+		Sama_2518	0.61	-0.3
3,026,188	+		Sama_2518	0.61	-0.0
3,026,188	+		Sama_2518	0.61	+0.1
3,026,188	+		Sama_2518	0.61	+0.8
3,026,188	+		Sama_2518	0.61	+1.4
3,026,188	+		Sama_2518	0.61	+0.2
3,026,189	-		Sama_2518	0.61	+0.1
3,026,189	-		Sama_2518	0.61	-0.4
3,026,189	-		Sama_2518	0.61	-0.4
3,026,189	-		Sama_2518	0.61	+1.1
3,026,189	-		Sama_2518	0.61	+0.9
3,026,189	-		Sama_2518	0.61	-0.5
3,026,280	+		Sama_2518	0.67	+0.2
3,026,281	-		Sama_2518	0.67	-0.2
3,026,378	+		Sama_2518	0.73	-0.8
3,026,378	+		Sama_2518	0.73	+0.6
3,026,378	+		Sama_2518	0.73	-0.3
3,026,380	+		Sama_2518	0.73	+0.3
3,026,380	+		Sama_2518	0.73	+0.2
3,026,380	+		Sama_2518	0.73	+0.4
3,026,380	+		Sama_2518	0.73	-0.4
3,026,381	-		Sama_2518	0.73	-0.2
3,026,381	-		Sama_2518	0.73	-0.3
3,026,381	-		Sama_2518	0.73	-0.1
3,026,381	-		Sama_2518	0.73	-0.4
3,026,381	-		Sama_2518	0.73	-0.1
3,026,393	-		Sama_2518	0.74	+0.3
3,026,505	+		Sama_2518	0.81	+0.2
3,026,505	+		Sama_2518	0.81	+0.1
3,026,505	+		Sama_2518	0.81	-0.3
3,026,506	-		Sama_2518	0.81	-0.2
3,026,526	+		Sama_2518	0.82	-1.4
3,026,526	+		Sama_2518	0.82	+0.6
3,026,526	+		Sama_2518	0.82	+0.8
3,026,526	+		Sama_2518	0.82	-0.4
3,026,527	-		Sama_2518	0.82	-1.4
3,026,527	-		Sama_2518	0.82	-0.9
3,026,527	-		Sama_2518	0.82	-0.2
3,026,528	+		Sama_2518	0.83	-0.1
3,026,528	+		Sama_2518	0.83	+0.0
3,026,528	+		Sama_2518	0.83	-0.7
3,026,529	-		Sama_2518	0.83	+0.6
3,026,529	-		Sama_2518	0.83	-0.9
3,026,529	-		Sama_2518	0.83	+0.0
3,026,529	-		Sama_2518	0.83	-0.0
3,026,529	-		Sama_2518	0.83	-0.3
3,026,564	+		Sama_2518	0.85	+1.9
3,026,564	+		Sama_2518	0.85	+0.1
3,026,564	+		Sama_2518	0.85	+0.8
3,026,565	-		Sama_2518	0.85	-0.5
3,026,565	-		Sama_2518	0.85	-0.5
3,026,565	-		Sama_2518	0.85	+1.1
3,026,565	-		Sama_2518	0.85	+0.7
3,026,569	+		Sama_2518	0.85	+0.3
3,026,569	+		Sama_2518	0.85	+0.0
3,026,570	-		Sama_2518	0.85	+0.4
3,026,597	-		Sama_2518	0.87	-0.4
3,026,624	+		Sama_2518	0.89	-0.3
3,026,624	+		Sama_2518	0.89	-1.3
3,026,624	+		Sama_2518	0.89	+0.1
3,026,624	+		Sama_2518	0.89	-1.0
3,026,624	+		Sama_2518	0.89	+0.6
3,026,625	-		Sama_2518	0.89	-0.5
3,026,625	-		Sama_2518	0.89	+0.3
3,026,750	+				-1.0
3,026,751	-				+0.3
3,026,766	+				-0.4
3,026,766	+				+0.7
3,026,766	+				-0.8
3,026,766	+				-2.3
3,026,767	-				-0.5
3,026,964	-				-0.7
3,026,967	-				+0.9
3,027,081	-				+0.1
3,027,105	-		Sama_2519	0.10	-0.1
3,027,170	+		Sama_2519	0.15	+0.9
3,027,171	-		Sama_2519	0.15	+0.7
3,027,218	-		Sama_2519	0.18	-0.2
3,027,249	+		Sama_2519	0.20	+1.6
3,027,249	+		Sama_2519	0.20	-0.2
3,027,249	+		Sama_2519	0.20	-0.2
3,027,249	+		Sama_2519	0.20	+1.1
3,027,250	-		Sama_2519	0.20	+0.6
3,027,250	-		Sama_2519	0.20	-0.1
3,027,250	-		Sama_2519	0.20	-0.1
3,027,268	+		Sama_2519	0.21	+0.2
3,027,285	-		Sama_2519	0.23	+0.6
3,027,285	-		Sama_2519	0.23	-1.0
3,027,311	+		Sama_2519	0.24	-0.1
3,027,312	-		Sama_2519	0.24	+0.3
3,027,312	-		Sama_2519	0.24	+0.7
3,027,312	-		Sama_2519	0.24	-0.3
3,027,429	+		Sama_2519	0.32	+0.1
3,027,483	+		Sama_2519	0.36	-0.2
3,027,483	+		Sama_2519	0.36	+0.8
3,027,483	+		Sama_2519	0.36	+0.2
3,027,484	+		Sama_2519	0.36	-0.4
3,027,484	-		Sama_2519	0.36	-2.3
3,027,484	-		Sama_2519	0.36	-1.8
3,027,505	+		Sama_2519	0.38	-0.0
3,027,555	+		Sama_2519	0.41	+0.2
3,027,555	+		Sama_2519	0.41	+0.6
3,027,555	+		Sama_2519	0.41	+0.6
3,027,556	-		Sama_2519	0.41	+0.9
3,027,556	-		Sama_2519	0.41	+0.9
3,027,720	-		Sama_2519	0.52	+0.3