Experiment: D-Maltose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Sama_0594 and Sama_0595 are separated by 406 nucleotides Sama_0595 and Sama_0596 are separated by 161 nucleotides
Sama_0594: Sama_0594 - predicted chromosome partitioning protein (with smc-like Sama_0592) <small>(from data)</small>, at 744,021 to 745,241
_0594
Sama_0595: Sama_0595 - sodium:dicarboxylate symporter (RefSeq), at 745,648 to 746,892
_0595
Sama_0596: Sama_0596 - IS1004 transposase (RefSeq), at 747,054 to 747,500
_0596
Position (kb) 745
746
747 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 744.707 kb on + strand, within Sama_0594 at 744.735 kb on + strand, within Sama_0594 at 744.736 kb on - strand, within Sama_0594 at 744.743 kb on + strand, within Sama_0594 at 744.743 kb on + strand, within Sama_0594 at 744.743 kb on + strand, within Sama_0594 at 744.743 kb on + strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.744 kb on - strand, within Sama_0594 at 744.756 kb on + strand, within Sama_0594 at 744.756 kb on + strand, within Sama_0594 at 744.757 kb on - strand, within Sama_0594 at 744.803 kb on + strand, within Sama_0594 at 744.849 kb on - strand, within Sama_0594 at 744.916 kb on + strand, within Sama_0594 at 744.916 kb on + strand, within Sama_0594 at 744.916 kb on + strand, within Sama_0594 at 744.916 kb on + strand, within Sama_0594 at 744.917 kb on - strand, within Sama_0594 at 744.917 kb on - strand, within Sama_0594 at 744.978 kb on - strand, within Sama_0594 at 745.014 kb on + strand, within Sama_0594 at 745.014 kb on + strand, within Sama_0594 at 745.015 kb on - strand, within Sama_0594 at 745.015 kb on - strand, within Sama_0594 at 745.015 kb on - strand, within Sama_0594 at 745.030 kb on + strand, within Sama_0594 at 745.030 kb on + strand, within Sama_0594 at 745.030 kb on + strand, within Sama_0594 at 745.030 kb on + strand, within Sama_0594 at 745.031 kb on - strand, within Sama_0594 at 745.031 kb on - strand, within Sama_0594 at 745.031 kb on - strand, within Sama_0594 at 745.031 kb on - strand, within Sama_0594 at 745.031 kb on - strand, within Sama_0594 at 745.062 kb on + strand, within Sama_0594 at 745.063 kb on - strand, within Sama_0594 at 745.063 kb on - strand, within Sama_0594 at 745.148 kb on + strand at 745.148 kb on + strand at 745.148 kb on + strand at 745.148 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.194 kb on + strand at 745.195 kb on - strand at 745.196 kb on + strand at 745.196 kb on + strand at 745.281 kb on + strand at 745.290 kb on + strand at 745.290 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.334 kb on + strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.335 kb on - strand at 745.338 kb on + strand at 745.492 kb on + strand at 745.626 kb on + strand at 745.627 kb on - strand at 745.627 kb on - strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.647 kb on + strand at 745.648 kb on - strand at 745.648 kb on - strand at 745.648 kb on - strand at 745.648 kb on - strand at 745.648 kb on - strand at 745.689 kb on + strand at 745.720 kb on + strand at 745.720 kb on + strand at 745.720 kb on + strand at 745.720 kb on + strand at 745.720 kb on + strand at 745.720 kb on + strand at 745.734 kb on + strand at 745.734 kb on + strand at 745.860 kb on + strand, within Sama_0595 at 745.909 kb on + strand, within Sama_0595 at 745.909 kb on + strand, within Sama_0595 at 745.910 kb on - strand, within Sama_0595 at 745.920 kb on + strand, within Sama_0595 at 745.920 kb on + strand, within Sama_0595 at 745.921 kb on - strand, within Sama_0595 at 745.932 kb on + strand, within Sama_0595 at 745.932 kb on + strand, within Sama_0595 at 745.932 kb on + strand, within Sama_0595 at 745.932 kb on + strand, within Sama_0595 at 745.932 kb on + strand, within Sama_0595 at 745.933 kb on - strand, within Sama_0595 at 745.933 kb on - strand, within Sama_0595 at 745.934 kb on + strand, within Sama_0595 at 745.935 kb on - strand, within Sama_0595 at 746.013 kb on + strand, within Sama_0595 at 746.051 kb on + strand, within Sama_0595 at 746.052 kb on - strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.057 kb on + strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.058 kb on - strand, within Sama_0595 at 746.085 kb on + strand, within Sama_0595 at 746.085 kb on + strand, within Sama_0595 at 746.085 kb on + strand, within Sama_0595 at 746.085 kb on + strand, within Sama_0595 at 746.086 kb on - strand, within Sama_0595 at 746.086 kb on - strand, within Sama_0595 at 746.086 kb on - strand, within Sama_0595 at 746.097 kb on + strand, within Sama_0595 at 746.097 kb on + strand, within Sama_0595 at 746.097 kb on + strand, within Sama_0595 at 746.098 kb on - strand, within Sama_0595 at 746.115 kb on + strand, within Sama_0595 at 746.116 kb on - strand, within Sama_0595 at 746.175 kb on - strand, within Sama_0595 at 746.175 kb on - strand, within Sama_0595 at 746.196 kb on + strand, within Sama_0595 at 746.277 kb on + strand, within Sama_0595 at 746.277 kb on + strand, within Sama_0595 at 746.278 kb on - strand, within Sama_0595 at 746.278 kb on - strand, within Sama_0595 at 746.314 kb on + strand, within Sama_0595 at 746.315 kb on - strand, within Sama_0595 at 746.362 kb on + strand, within Sama_0595 at 746.368 kb on + strand, within Sama_0595 at 746.578 kb on + strand, within Sama_0595 at 746.579 kb on - strand, within Sama_0595 at 746.579 kb on - strand, within Sama_0595 at 746.583 kb on + strand, within Sama_0595 at 746.583 kb on + strand, within Sama_0595 at 746.583 kb on + strand, within Sama_0595 at 746.583 kb on + strand, within Sama_0595 at 746.584 kb on - strand, within Sama_0595 at 746.584 kb on - strand, within Sama_0595 at 746.584 kb on - strand, within Sama_0595 at 746.584 kb on - strand, within Sama_0595 at 746.619 kb on + strand, within Sama_0595 at 746.619 kb on + strand, within Sama_0595 at 746.620 kb on - strand, within Sama_0595 at 746.620 kb on - strand, within Sama_0595 at 746.625 kb on + strand, within Sama_0595 at 746.625 kb on + strand, within Sama_0595 at 746.625 kb on + strand, within Sama_0595 at 746.625 kb on + strand, within Sama_0595 at 746.626 kb on - strand, within Sama_0595 at 746.661 kb on + strand, within Sama_0595 at 746.661 kb on + strand, within Sama_0595 at 746.662 kb on - strand, within Sama_0595 at 746.727 kb on + strand, within Sama_0595 at 746.788 kb on - strand at 746.798 kb on + strand at 746.798 kb on + strand at 746.798 kb on + strand at 746.798 kb on + strand at 746.799 kb on - strand at 746.811 kb on + strand at 746.812 kb on - strand at 746.812 kb on - strand at 746.920 kb on + strand at 746.921 kb on - strand at 746.921 kb on - strand at 746.945 kb on - strand at 746.945 kb on - strand at 746.945 kb on - strand at 746.945 kb on - strand at 746.958 kb on - strand at 747.543 kb on + strand at 747.543 kb on + strand at 747.543 kb on + strand at 747.573 kb on - strand at 747.573 kb on - strand at 747.594 kb on - strand at 747.606 kb on + strand at 747.652 kb on - strand at 747.654 kb on + strand at 747.672 kb on - strand at 747.672 kb on - strand at 747.688 kb on - strand at 747.706 kb on + strand at 747.732 kb on + strand at 747.736 kb on - strand at 747.738 kb on + strand at 747.776 kb on + strand at 747.797 kb on + strand at 747.797 kb on + strand at 747.835 kb on + strand at 747.849 kb on + strand at 747.849 kb on + strand at 747.849 kb on + strand at 747.849 kb on + strand at 747.850 kb on - strand at 747.862 kb on + strand at 747.863 kb on - strand at 747.891 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Maltose remove 744,707 + Sama_0594 0.56 +0.1 744,735 + Sama_0594 0.58 -0.9 744,736 - Sama_0594 0.59 +0.2 744,743 + Sama_0594 0.59 +1.3 744,743 + Sama_0594 0.59 -0.6 744,743 + Sama_0594 0.59 +0.8 744,743 + Sama_0594 0.59 -1.1 744,744 - Sama_0594 0.59 +0.1 744,744 - Sama_0594 0.59 -0.0 744,744 - Sama_0594 0.59 -0.6 744,744 - Sama_0594 0.59 -0.4 744,744 - Sama_0594 0.59 +0.8 744,744 - Sama_0594 0.59 +1.8 744,756 + Sama_0594 0.60 +0.4 744,756 + Sama_0594 0.60 -0.5 744,757 - Sama_0594 0.60 -1.2 744,803 + Sama_0594 0.64 -0.6 744,849 - Sama_0594 0.68 +0.5 744,916 + Sama_0594 0.73 -3.6 744,916 + Sama_0594 0.73 +0.1 744,916 + Sama_0594 0.73 -0.7 744,916 + Sama_0594 0.73 +0.8 744,917 - Sama_0594 0.73 +1.5 744,917 - Sama_0594 0.73 +0.8 744,978 - Sama_0594 0.78 +1.3 745,014 + Sama_0594 0.81 -0.0 745,014 + Sama_0594 0.81 -2.2 745,015 - Sama_0594 0.81 -1.0 745,015 - Sama_0594 0.81 -0.8 745,015 - Sama_0594 0.81 +0.0 745,030 + Sama_0594 0.83 +0.1 745,030 + Sama_0594 0.83 +0.1 745,030 + Sama_0594 0.83 -1.1 745,030 + Sama_0594 0.83 -0.0 745,031 - Sama_0594 0.83 +0.2 745,031 - Sama_0594 0.83 -1.6 745,031 - Sama_0594 0.83 -2.7 745,031 - Sama_0594 0.83 +0.6 745,031 - Sama_0594 0.83 -0.8 745,062 + Sama_0594 0.85 +1.6 745,063 - Sama_0594 0.85 +0.4 745,063 - Sama_0594 0.85 -0.2 745,148 + +0.8 745,148 + -1.4 745,148 + -0.4 745,148 + -1.4 745,194 + -0.7 745,194 + +1.8 745,194 + +0.4 745,194 + +0.2 745,194 + -0.4 745,194 + -0.2 745,194 + +0.9 745,195 - -1.8 745,196 + -1.0 745,196 + -0.0 745,281 + +0.1 745,290 + -1.4 745,290 + +0.1 745,334 + +0.1 745,334 + +0.5 745,334 + +1.5 745,334 + -0.5 745,334 + -0.1 745,334 + +0.9 745,334 + -0.4 745,334 + +0.5 745,334 + -0.8 745,335 - +1.0 745,335 - -0.6 745,335 - +1.1 745,335 - +0.0 745,335 - -0.8 745,335 - -0.3 745,335 - -0.1 745,335 - +0.9 745,335 - -0.9 745,335 - +0.1 745,335 - -1.0 745,335 - -0.8 745,338 + +0.2 745,492 + +0.8 745,626 + -0.2 745,627 - +0.9 745,627 - -0.8 745,647 + +1.3 745,647 + +1.1 745,647 + -1.0 745,647 + +0.6 745,647 + -0.0 745,647 + +0.0 745,647 + +1.8 745,648 - +0.4 745,648 - +1.1 745,648 - -1.0 745,648 - +0.1 745,648 - +1.4 745,689 + +0.6 745,720 + +0.5 745,720 + -0.4 745,720 + +0.2 745,720 + +0.5 745,720 + -0.5 745,720 + +1.3 745,734 + -0.9 745,734 + -0.2 745,860 + Sama_0595 0.17 +0.4 745,909 + Sama_0595 0.21 +1.3 745,909 + Sama_0595 0.21 +0.8 745,910 - Sama_0595 0.21 +0.3 745,920 + Sama_0595 0.22 -0.7 745,920 + Sama_0595 0.22 +1.8 745,921 - Sama_0595 0.22 +2.3 745,932 + Sama_0595 0.23 +0.5 745,932 + Sama_0595 0.23 +1.0 745,932 + Sama_0595 0.23 -0.0 745,932 + Sama_0595 0.23 +1.8 745,932 + Sama_0595 0.23 +0.9 745,933 - Sama_0595 0.23 +0.8 745,933 - Sama_0595 0.23 +0.6 745,934 + Sama_0595 0.23 +1.1 745,935 - Sama_0595 0.23 -1.7 746,013 + Sama_0595 0.29 +1.1 746,051 + Sama_0595 0.32 +1.2 746,052 - Sama_0595 0.32 +0.0 746,057 + Sama_0595 0.33 +1.1 746,057 + Sama_0595 0.33 -0.4 746,057 + Sama_0595 0.33 +0.2 746,057 + Sama_0595 0.33 +2.3 746,057 + Sama_0595 0.33 +0.5 746,057 + Sama_0595 0.33 +0.3 746,057 + Sama_0595 0.33 +0.6 746,057 + Sama_0595 0.33 -1.6 746,057 + Sama_0595 0.33 +1.2 746,057 + Sama_0595 0.33 +0.1 746,058 - Sama_0595 0.33 +1.2 746,058 - Sama_0595 0.33 -0.0 746,058 - Sama_0595 0.33 +2.1 746,058 - Sama_0595 0.33 +0.9 746,058 - Sama_0595 0.33 +3.9 746,058 - Sama_0595 0.33 -0.8 746,058 - Sama_0595 0.33 +1.2 746,058 - Sama_0595 0.33 +1.2 746,085 + Sama_0595 0.35 -0.6 746,085 + Sama_0595 0.35 +1.8 746,085 + Sama_0595 0.35 -0.2 746,085 + Sama_0595 0.35 +1.1 746,086 - Sama_0595 0.35 -0.6 746,086 - Sama_0595 0.35 +0.3 746,086 - Sama_0595 0.35 +0.5 746,097 + Sama_0595 0.36 +1.0 746,097 + Sama_0595 0.36 +0.4 746,097 + Sama_0595 0.36 -0.6 746,098 - Sama_0595 0.36 +2.3 746,115 + Sama_0595 0.38 +2.1 746,116 - Sama_0595 0.38 +0.0 746,175 - Sama_0595 0.42 +0.5 746,175 - Sama_0595 0.42 +2.0 746,196 + Sama_0595 0.44 +0.3 746,277 + Sama_0595 0.51 -0.6 746,277 + Sama_0595 0.51 -0.2 746,278 - Sama_0595 0.51 +0.0 746,278 - Sama_0595 0.51 +1.1 746,314 + Sama_0595 0.53 +0.8 746,315 - Sama_0595 0.54 -2.0 746,362 + Sama_0595 0.57 -0.7 746,368 + Sama_0595 0.58 +0.6 746,578 + Sama_0595 0.75 -0.1 746,579 - Sama_0595 0.75 +0.3 746,579 - Sama_0595 0.75 +1.3 746,583 + Sama_0595 0.75 +0.5 746,583 + Sama_0595 0.75 +2.8 746,583 + Sama_0595 0.75 +1.0 746,583 + Sama_0595 0.75 +3.5 746,584 - Sama_0595 0.75 +0.3 746,584 - Sama_0595 0.75 +1.0 746,584 - Sama_0595 0.75 +1.1 746,584 - Sama_0595 0.75 +2.5 746,619 + Sama_0595 0.78 +0.6 746,619 + Sama_0595 0.78 +0.3 746,620 - Sama_0595 0.78 +1.0 746,620 - Sama_0595 0.78 +0.8 746,625 + Sama_0595 0.78 +0.0 746,625 + Sama_0595 0.78 -0.2 746,625 + Sama_0595 0.78 +1.1 746,625 + Sama_0595 0.78 +1.3 746,626 - Sama_0595 0.79 +0.8 746,661 + Sama_0595 0.81 -0.6 746,661 + Sama_0595 0.81 +0.1 746,662 - Sama_0595 0.81 +0.1 746,727 + Sama_0595 0.87 +0.4 746,788 - +0.8 746,798 + +0.3 746,798 + +0.5 746,798 + +0.9 746,798 + +0.6 746,799 - +1.1 746,811 + +1.3 746,812 - +2.2 746,812 - +1.8 746,920 + +0.3 746,921 - -0.4 746,921 - -1.0 746,945 - -1.1 746,945 - -0.5 746,945 - -0.7 746,945 - -0.8 746,958 - +0.0 747,543 + -0.7 747,543 + -0.2 747,543 + -1.1 747,573 - -0.6 747,573 - +1.1 747,594 - +0.5 747,606 + -0.7 747,652 - -0.7 747,654 + -0.7 747,672 - +0.5 747,672 - +0.6 747,688 - +0.2 747,706 + -1.8 747,732 + +1.1 747,736 - +1.6 747,738 + +0.3 747,776 + -0.5 747,797 + -1.2 747,797 + +0.8 747,835 + -0.0 747,849 + -1.4 747,849 + -0.2 747,849 + +1.5 747,849 + -0.8 747,850 - +0.8 747,862 + +0.8 747,863 - -1.1 747,891 + -0.1
Or see this region's nucleotide sequence