Experiment: m.b. Aluminum chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_262p02300 and PGA1_262p02310 are separated by 122 nucleotides PGA1_262p02310 and PGA1_262p02320 are separated by 3 nucleotides
PGA1_262p02300: PGA1_262p02300 - UDP-glucose/GDP-mannose dehydrogenase, at 251,609 to 252,880
_262p02300
PGA1_262p02310: PGA1_262p02310 - amidinotransferase, at 253,003 to 253,785
_262p02310
PGA1_262p02320: PGA1_262p02320 - putative acetolactate synthase isozyme 1 large subunit, at 253,789 to 255,444
_262p02320
Position (kb)
253
254 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 252.116 kb on + strand, within PGA1_262p02300 at 252.116 kb on + strand, within PGA1_262p02300 at 252.124 kb on - strand, within PGA1_262p02300 at 252.212 kb on - strand, within PGA1_262p02300 at 252.359 kb on - strand, within PGA1_262p02300 at 252.372 kb on - strand, within PGA1_262p02300 at 252.424 kb on + strand, within PGA1_262p02300 at 252.429 kb on + strand, within PGA1_262p02300 at 252.437 kb on - strand, within PGA1_262p02300 at 252.437 kb on - strand, within PGA1_262p02300 at 252.523 kb on - strand, within PGA1_262p02300 at 252.710 kb on - strand, within PGA1_262p02300 at 252.836 kb on + strand at 252.949 kb on - strand at 253.203 kb on + strand, within PGA1_262p02310 at 253.290 kb on - strand, within PGA1_262p02310 at 253.290 kb on - strand, within PGA1_262p02310 at 253.372 kb on + strand, within PGA1_262p02310 at 253.445 kb on + strand, within PGA1_262p02310 at 253.469 kb on - strand, within PGA1_262p02310 at 253.623 kb on + strand, within PGA1_262p02310 at 253.623 kb on + strand, within PGA1_262p02310 at 253.631 kb on - strand, within PGA1_262p02310 at 253.694 kb on - strand, within PGA1_262p02310 at 253.694 kb on - strand, within PGA1_262p02310 at 253.765 kb on + strand at 253.878 kb on - strand at 253.887 kb on + strand at 253.904 kb on - strand at 253.988 kb on + strand, within PGA1_262p02320 at 254.372 kb on + strand, within PGA1_262p02320 at 254.377 kb on + strand, within PGA1_262p02320 at 254.380 kb on - strand, within PGA1_262p02320 at 254.590 kb on - strand, within PGA1_262p02320 at 254.592 kb on + strand, within PGA1_262p02320 at 254.655 kb on - strand, within PGA1_262p02320 at 254.765 kb on - strand, within PGA1_262p02320 at 254.770 kb on - strand, within PGA1_262p02320
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1.25 mM remove 252,116 + PGA1_262p02300 0.40 +2.4 252,116 + PGA1_262p02300 0.40 +0.2 252,124 - PGA1_262p02300 0.40 +1.2 252,212 - PGA1_262p02300 0.47 -3.4 252,359 - PGA1_262p02300 0.59 -1.1 252,372 - PGA1_262p02300 0.60 +0.6 252,424 + PGA1_262p02300 0.64 -1.0 252,429 + PGA1_262p02300 0.64 -0.6 252,437 - PGA1_262p02300 0.65 -0.8 252,437 - PGA1_262p02300 0.65 -1.1 252,523 - PGA1_262p02300 0.72 +2.1 252,710 - PGA1_262p02300 0.87 +1.2 252,836 + +2.1 252,949 - -1.5 253,203 + PGA1_262p02310 0.26 -2.0 253,290 - PGA1_262p02310 0.37 -0.3 253,290 - PGA1_262p02310 0.37 -0.8 253,372 + PGA1_262p02310 0.47 +1.9 253,445 + PGA1_262p02310 0.56 -1.1 253,469 - PGA1_262p02310 0.60 +0.4 253,623 + PGA1_262p02310 0.79 -1.0 253,623 + PGA1_262p02310 0.79 -0.8 253,631 - PGA1_262p02310 0.80 -0.8 253,694 - PGA1_262p02310 0.88 -0.4 253,694 - PGA1_262p02310 0.88 -0.2 253,765 + +0.2 253,878 - +1.2 253,887 + -0.3 253,904 - +0.7 253,988 + PGA1_262p02320 0.12 +1.7 254,372 + PGA1_262p02320 0.35 -0.2 254,377 + PGA1_262p02320 0.36 +1.2 254,380 - PGA1_262p02320 0.36 +0.2 254,590 - PGA1_262p02320 0.48 +0.8 254,592 + PGA1_262p02320 0.48 -0.3 254,655 - PGA1_262p02320 0.52 +1.5 254,765 - PGA1_262p02320 0.59 -0.4 254,770 - PGA1_262p02320 0.59 +0.7
Or see this region's nucleotide sequence