Experiment: m.b. Aluminum chloride 1.25 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c26880 and PGA1_c26890 are separated by 66 nucleotides PGA1_c26890 and PGA1_c26900 are separated by 328 nucleotides PGA1_c26900 and PGA1_c26910 are separated by 13 nucleotides
PGA1_c26880: PGA1_c26880 - putative iron transport system permease protein, at 2,804,947 to 2,806,026
_c26880
PGA1_c26890: PGA1_c26890 - putative endoribonuclease, at 2,806,093 to 2,806,440
_c26890
PGA1_c26900: PGA1_c26900 - putative lipoprotein, at 2,806,769 to 2,807,800
_c26900
PGA1_c26910: PGA1_c26910 - ABC transporter, ATP-binding protein, at 2,807,814 to 2,809,382
_c26910
Position (kb)
2806
2807
2808 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2806.172 kb on + strand, within PGA1_c26890 at 2806.178 kb on + strand, within PGA1_c26890 at 2806.196 kb on + strand, within PGA1_c26890 at 2806.204 kb on - strand, within PGA1_c26890 at 2806.257 kb on - strand, within PGA1_c26890 at 2806.264 kb on + strand, within PGA1_c26890 at 2806.285 kb on + strand, within PGA1_c26890 at 2806.337 kb on - strand, within PGA1_c26890 at 2806.337 kb on - strand, within PGA1_c26890 at 2806.442 kb on - strand at 2806.477 kb on + strand at 2806.480 kb on - strand at 2806.625 kb on + strand at 2806.633 kb on - strand at 2806.640 kb on - strand at 2806.679 kb on + strand at 2806.705 kb on - strand at 2806.755 kb on - strand at 2806.850 kb on - strand at 2806.850 kb on - strand at 2806.868 kb on + strand at 2806.881 kb on + strand, within PGA1_c26900 at 2806.881 kb on + strand, within PGA1_c26900 at 2806.889 kb on - strand, within PGA1_c26900 at 2806.938 kb on - strand, within PGA1_c26900 at 2806.987 kb on + strand, within PGA1_c26900 at 2806.987 kb on + strand, within PGA1_c26900 at 2806.989 kb on + strand, within PGA1_c26900 at 2807.019 kb on + strand, within PGA1_c26900 at 2807.025 kb on + strand, within PGA1_c26900 at 2807.129 kb on + strand, within PGA1_c26900 at 2807.166 kb on + strand, within PGA1_c26900 at 2807.176 kb on + strand, within PGA1_c26900 at 2807.181 kb on + strand, within PGA1_c26900 at 2807.181 kb on + strand, within PGA1_c26900 at 2807.189 kb on - strand, within PGA1_c26900 at 2807.222 kb on - strand, within PGA1_c26900 at 2807.222 kb on - strand, within PGA1_c26900 at 2807.325 kb on - strand, within PGA1_c26900 at 2807.382 kb on + strand, within PGA1_c26900 at 2807.390 kb on - strand, within PGA1_c26900 at 2807.431 kb on - strand, within PGA1_c26900 at 2807.438 kb on + strand, within PGA1_c26900 at 2807.438 kb on + strand, within PGA1_c26900 at 2807.446 kb on - strand, within PGA1_c26900 at 2807.502 kb on + strand, within PGA1_c26900 at 2807.533 kb on + strand, within PGA1_c26900 at 2807.533 kb on + strand, within PGA1_c26900 at 2807.607 kb on - strand, within PGA1_c26900 at 2807.607 kb on - strand, within PGA1_c26900 at 2807.607 kb on - strand, within PGA1_c26900 at 2807.685 kb on + strand, within PGA1_c26900 at 2807.685 kb on + strand, within PGA1_c26900 at 2807.685 kb on + strand, within PGA1_c26900 at 2807.779 kb on + strand at 2807.844 kb on + strand at 2807.844 kb on + strand at 2807.856 kb on + strand at 2807.934 kb on + strand at 2808.013 kb on - strand, within PGA1_c26910 at 2808.013 kb on - strand, within PGA1_c26910 at 2808.013 kb on - strand, within PGA1_c26910 at 2808.025 kb on + strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.033 kb on - strand, within PGA1_c26910 at 2808.043 kb on + strand, within PGA1_c26910 at 2808.056 kb on - strand, within PGA1_c26910 at 2808.080 kb on - strand, within PGA1_c26910 at 2808.132 kb on - strand, within PGA1_c26910 at 2808.172 kb on + strand, within PGA1_c26910 at 2808.180 kb on - strand, within PGA1_c26910 at 2808.192 kb on - strand, within PGA1_c26910 at 2808.271 kb on + strand, within PGA1_c26910 at 2808.313 kb on + strand, within PGA1_c26910 at 2808.352 kb on - strand, within PGA1_c26910 at 2808.410 kb on - strand, within PGA1_c26910 at 2808.410 kb on - strand, within PGA1_c26910 at 2808.411 kb on - strand, within PGA1_c26910 at 2808.436 kb on + strand, within PGA1_c26910 at 2808.444 kb on - strand, within PGA1_c26910 at 2808.601 kb on + strand, within PGA1_c26910 at 2808.601 kb on + strand, within PGA1_c26910 at 2808.603 kb on - strand, within PGA1_c26910 at 2808.609 kb on - strand, within PGA1_c26910 at 2808.690 kb on + strand, within PGA1_c26910 at 2808.740 kb on + strand, within PGA1_c26910 at 2808.744 kb on + strand, within PGA1_c26910 at 2808.757 kb on - strand, within PGA1_c26910 at 2808.796 kb on - strand, within PGA1_c26910
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Aluminum chloride 1.25 mM remove 2,806,172 + PGA1_c26890 0.23 +0.3 2,806,178 + PGA1_c26890 0.24 +1.0 2,806,196 + PGA1_c26890 0.30 -0.1 2,806,204 - PGA1_c26890 0.32 +0.7 2,806,257 - PGA1_c26890 0.47 +1.4 2,806,264 + PGA1_c26890 0.49 +1.7 2,806,285 + PGA1_c26890 0.55 -0.1 2,806,337 - PGA1_c26890 0.70 +0.7 2,806,337 - PGA1_c26890 0.70 -0.1 2,806,442 - -1.6 2,806,477 + -0.2 2,806,480 - +0.5 2,806,625 + -0.0 2,806,633 - -0.3 2,806,640 - +0.7 2,806,679 + -0.9 2,806,705 - -0.3 2,806,755 - +0.7 2,806,850 - +0.7 2,806,850 - +0.4 2,806,868 + +1.1 2,806,881 + PGA1_c26900 0.11 +0.8 2,806,881 + PGA1_c26900 0.11 -0.3 2,806,889 - PGA1_c26900 0.12 +1.8 2,806,938 - PGA1_c26900 0.16 +1.3 2,806,987 + PGA1_c26900 0.21 +0.4 2,806,987 + PGA1_c26900 0.21 +0.7 2,806,989 + PGA1_c26900 0.21 +2.5 2,807,019 + PGA1_c26900 0.24 -0.4 2,807,025 + PGA1_c26900 0.25 +1.1 2,807,129 + PGA1_c26900 0.35 +0.7 2,807,166 + PGA1_c26900 0.38 -0.2 2,807,176 + PGA1_c26900 0.39 +0.9 2,807,181 + PGA1_c26900 0.40 +0.7 2,807,181 + PGA1_c26900 0.40 +0.1 2,807,189 - PGA1_c26900 0.41 -0.3 2,807,222 - PGA1_c26900 0.44 -1.4 2,807,222 - PGA1_c26900 0.44 +0.6 2,807,325 - PGA1_c26900 0.54 +0.3 2,807,382 + PGA1_c26900 0.59 -1.2 2,807,390 - PGA1_c26900 0.60 -0.9 2,807,431 - PGA1_c26900 0.64 -0.1 2,807,438 + PGA1_c26900 0.65 -2.3 2,807,438 + PGA1_c26900 0.65 -0.5 2,807,446 - PGA1_c26900 0.66 +1.4 2,807,502 + PGA1_c26900 0.71 -2.4 2,807,533 + PGA1_c26900 0.74 +1.4 2,807,533 + PGA1_c26900 0.74 +2.1 2,807,607 - PGA1_c26900 0.81 -0.4 2,807,607 - PGA1_c26900 0.81 +0.9 2,807,607 - PGA1_c26900 0.81 -0.7 2,807,685 + PGA1_c26900 0.89 -0.3 2,807,685 + PGA1_c26900 0.89 -0.9 2,807,685 + PGA1_c26900 0.89 +0.8 2,807,779 + +0.5 2,807,844 + -1.1 2,807,844 + +0.7 2,807,856 + +0.4 2,807,934 + -1.6 2,808,013 - PGA1_c26910 0.13 -0.9 2,808,013 - PGA1_c26910 0.13 +1.2 2,808,013 - PGA1_c26910 0.13 -0.3 2,808,025 + PGA1_c26910 0.13 +2.5 2,808,033 - PGA1_c26910 0.14 +1.1 2,808,033 - PGA1_c26910 0.14 +0.7 2,808,033 - PGA1_c26910 0.14 +1.1 2,808,033 - PGA1_c26910 0.14 +0.1 2,808,033 - PGA1_c26910 0.14 -0.2 2,808,033 - PGA1_c26910 0.14 +1.4 2,808,043 + PGA1_c26910 0.15 -0.4 2,808,056 - PGA1_c26910 0.15 +0.0 2,808,080 - PGA1_c26910 0.17 -1.1 2,808,132 - PGA1_c26910 0.20 +0.5 2,808,172 + PGA1_c26910 0.23 -1.0 2,808,180 - PGA1_c26910 0.23 -0.3 2,808,192 - PGA1_c26910 0.24 +0.7 2,808,271 + PGA1_c26910 0.29 -2.5 2,808,313 + PGA1_c26910 0.32 +1.1 2,808,352 - PGA1_c26910 0.34 +1.1 2,808,410 - PGA1_c26910 0.38 +0.4 2,808,410 - PGA1_c26910 0.38 -0.8 2,808,411 - PGA1_c26910 0.38 +1.1 2,808,436 + PGA1_c26910 0.40 -1.0 2,808,444 - PGA1_c26910 0.40 +0.7 2,808,601 + PGA1_c26910 0.50 +1.1 2,808,601 + PGA1_c26910 0.50 +0.7 2,808,603 - PGA1_c26910 0.50 +1.0 2,808,609 - PGA1_c26910 0.51 -1.3 2,808,690 + PGA1_c26910 0.56 -0.9 2,808,740 + PGA1_c26910 0.59 -0.9 2,808,744 + PGA1_c26910 0.59 -1.9 2,808,757 - PGA1_c26910 0.60 +1.4 2,808,796 - PGA1_c26910 0.63 -0.4
Or see this region's nucleotide sequence