Strain Fitness in Shewanella amazonensis SB2B around Sama_3593

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
4,223,855	+		Sama_3591	0.89	+0.0
4,223,855	+		Sama_3591	0.89	-0.5
4,223,873	+				+0.8
4,223,873	+				+1.4
4,223,873	+				-0.6
4,223,874	-				-0.6
4,223,874	-				+1.5
4,223,874	-				+2.5
4,223,874	-				-0.9
4,223,919	+				+0.8
4,223,919	+				+0.0
4,223,919	+				-0.8
4,223,919	+				+0.5
4,223,919	+				-1.4
4,223,919	+				+0.2
4,223,919	+				-0.4
4,223,919	+				+0.1
4,223,920	-				-1.3
4,223,920	-				+1.2
4,223,920	-				+1.3
4,223,920	-				-0.4
4,223,973	-				-0.6
4,223,973	-				-1.0
4,223,998	+				+0.6
4,223,999	-				+0.0
4,224,024	+		Sama_3592	0.13	-0.9
4,224,024	+		Sama_3592	0.13	-1.6
4,224,039	-		Sama_3592	0.15	-0.1
4,224,145	+		Sama_3592	0.29	-1.4
4,224,145	+		Sama_3592	0.29	+0.5
4,224,145	+		Sama_3592	0.29	+0.3
4,224,145	+		Sama_3592	0.29	-1.1
4,224,145	+		Sama_3592	0.29	+0.1
4,224,145	+		Sama_3592	0.29	+2.3
4,224,145	+		Sama_3592	0.29	+0.6
4,224,145	+		Sama_3592	0.29	-1.5
4,224,145	+		Sama_3592	0.29	+0.1
4,224,145	+		Sama_3592	0.29	-1.2
4,224,146	-		Sama_3592	0.29	-1.1
4,224,146	-		Sama_3592	0.29	+0.2
4,224,146	-		Sama_3592	0.29	-1.6
4,224,146	-		Sama_3592	0.29	+0.4
4,224,146	-		Sama_3592	0.29	-0.0
4,224,146	-		Sama_3592	0.29	-1.9
4,224,146	-		Sama_3592	0.29	+0.4
4,224,160	+		Sama_3592	0.31	+0.2
4,224,160	+		Sama_3592	0.31	-1.0
4,224,160	+		Sama_3592	0.31	+0.3
4,224,160	+		Sama_3592	0.31	-0.6
4,224,160	+		Sama_3592	0.31	+0.3
4,224,161	-		Sama_3592	0.31	-0.6
4,224,161	-		Sama_3592	0.31	+0.6
4,224,161	-		Sama_3592	0.31	-1.2
4,224,161	-		Sama_3592	0.31	+0.2
4,224,163	+		Sama_3592	0.32	+0.2
4,224,163	+		Sama_3592	0.32	-1.1
4,224,163	+		Sama_3592	0.32	+0.0
4,224,163	+		Sama_3592	0.32	-1.4
4,224,265	+		Sama_3592	0.45	-0.5
4,224,265	+		Sama_3592	0.45	-1.0
4,224,266	-		Sama_3592	0.45	+0.3
4,224,266	-		Sama_3592	0.45	-0.9
4,224,266	-		Sama_3592	0.45	-0.0
4,224,266	-		Sama_3592	0.45	+0.0
4,224,285	+		Sama_3592	0.48	+0.3
4,224,285	+		Sama_3592	0.48	-0.3
4,224,285	+		Sama_3592	0.48	+1.2
4,224,286	-		Sama_3592	0.48	-1.6
4,224,286	-		Sama_3592	0.48	-2.6
4,224,286	-		Sama_3592	0.48	-1.5
4,224,286	-		Sama_3592	0.48	+1.2
4,224,286	-		Sama_3592	0.48	+1.2
4,224,368	-		Sama_3592	0.59	-1.6
4,224,368	-		Sama_3592	0.59	-0.7
4,224,385	+		Sama_3592	0.61	-0.5
4,224,386	-		Sama_3592	0.61	+0.1
4,224,386	-		Sama_3592	0.61	-0.4
4,224,386	-		Sama_3592	0.61	+1.2
4,224,387	-		Sama_3592	0.61	+0.7
4,224,392	+		Sama_3592	0.62	-0.0
4,224,392	+		Sama_3592	0.62	-1.3
4,224,392	+		Sama_3592	0.62	+2.8
4,224,393	-		Sama_3592	0.62	-0.7
4,224,393	-		Sama_3592	0.62	-0.1
4,224,393	-		Sama_3592	0.62	+0.8
4,224,432	+		Sama_3592	0.67	-1.4
4,224,438	+		Sama_3592	0.68	-0.2
4,224,438	+		Sama_3592	0.68	+0.4
4,224,438	+		Sama_3592	0.68	-1.1
4,224,438	+		Sama_3592	0.68	-1.8
4,224,439	-		Sama_3592	0.68	+0.9
4,224,439	-		Sama_3592	0.68	+1.0
4,224,450	+		Sama_3592	0.70	-1.2
4,224,450	+		Sama_3592	0.70	-1.0
4,224,450	+		Sama_3592	0.70	-1.0
4,224,473	+		Sama_3592	0.73	-0.5
4,224,502	+		Sama_3592	0.77	-1.2
4,224,502	+		Sama_3592	0.77	-0.2
4,224,502	+		Sama_3592	0.77	+0.4
4,224,503	-		Sama_3592	0.77	+0.8
4,224,503	-		Sama_3592	0.77	-0.7
4,224,503	-		Sama_3592	0.77	-0.2
4,224,563	+		Sama_3592	0.85	+1.4
4,224,564	-		Sama_3592	0.85	+1.8
4,224,564	-		Sama_3592	0.85	-1.1
4,224,609	+				+2.2
4,224,609	+				+0.3
4,224,609	+				-1.2
4,224,610	-				-0.5
4,224,610	-				+1.2
4,224,610	-				-0.3
4,224,613	-				-0.2
4,224,613	-				-1.2
4,224,657	-				-0.2
4,224,657	-				-1.9
4,224,694	+				-0.1
4,224,695	-				-0.7
4,224,695	-				-0.9
4,224,695	-				-0.6
4,224,695	-				-0.8
4,224,709	-				-0.4
4,224,709	-				+2.4
4,224,784	+				-0.2
4,224,791	+				-1.1
4,224,791	+				-0.2
4,224,791	+				-0.9
4,224,791	+				+0.2
4,224,791	+				-0.0
4,224,791	+				+0.2
4,224,791	+				-0.1
4,224,792	-				-0.0
4,224,792	-				-1.2
4,224,792	-				-0.2
4,224,792	-				-0.6
4,224,824	+				-2.0
4,224,824	+				-0.7
4,224,825	-				+0.2
4,224,825	-				-0.6
4,224,825	-				-0.5
4,224,825	-				-0.1
4,224,825	-				-0.4
4,224,825	-				+1.3
4,224,826	+				-0.1
4,224,826	+				+0.8
4,224,826	+				-0.7
4,224,826	+				-0.2
4,224,826	+				+0.2
4,224,826	+				-1.8
4,224,826	+				-0.2
4,224,826	+				+1.6
4,224,826	+				-0.7
4,224,826	+				-1.4
4,224,826	+				-0.0
4,224,826	+				-0.4
4,224,826	+				+0.4
4,224,826	+				+1.2
4,224,826	+				+1.0
4,224,826	+				+0.4
4,224,826	+				+1.4
4,224,827	-				+0.2
4,224,827	-				-2.4
4,224,827	-				+0.1
4,224,827	-				-2.1
4,224,827	-				-0.7
4,224,827	-				-1.3
4,224,827	-				+0.5
4,224,827	-				+1.2
4,224,827	-				+0.3
4,224,827	-				+0.1
4,224,827	-				+1.4
4,224,827	-				-0.0
4,224,827	-				-1.3
4,224,836	+				-0.5
4,224,837	-				-0.4
4,224,837	-				-0.5
4,224,900	+				-0.7
4,224,900	+				-0.0
4,224,900	+				+0.1
4,224,900	+				-0.0
4,224,900	+				+0.3
4,224,900	+				+0.2
4,224,900	+				-1.0
4,224,900	+				+0.1
4,224,900	+				+0.6
4,224,900	+				+0.8
4,224,900	+				-1.2
4,224,900	+				-0.3
4,224,900	+				+0.8
4,224,900	+				-0.3
4,224,900	+				-0.3
4,224,901	-				+1.2
4,224,901	-				-1.9
4,224,901	-				-0.7
4,224,901	-				+0.6
4,224,942	-		Sama_3593	0.10	-0.0
4,224,942	-		Sama_3593	0.10	+0.2
4,224,961	-		Sama_3593	0.12	+0.6
4,224,973	+		Sama_3593	0.13	+2.8
4,224,992	-		Sama_3593	0.15	+1.2
4,224,992	-		Sama_3593	0.15	+0.2
4,225,009	+		Sama_3593	0.17	-0.7
4,225,009	+		Sama_3593	0.17	+1.1
4,225,010	-		Sama_3593	0.17	-0.6
4,225,010	-		Sama_3593	0.17	-0.6
4,225,010	-		Sama_3593	0.17	-1.1
4,225,010	-		Sama_3593	0.17	+0.2
4,225,024	+		Sama_3593	0.18	-0.0
4,225,024	+		Sama_3593	0.18	-0.3
4,225,024	+		Sama_3593	0.18	+1.8
4,225,024	+		Sama_3593	0.18	-0.8
4,225,024	+		Sama_3593	0.18	-2.5
4,225,024	+		Sama_3593	0.18	+0.8
4,225,024	+		Sama_3593	0.18	+0.4
4,225,024	+		Sama_3593	0.18	-1.0
4,225,024	+		Sama_3593	0.18	+0.2
4,225,024	+		Sama_3593	0.18	+0.1
4,225,024	+		Sama_3593	0.18	-0.3
4,225,025	-		Sama_3593	0.18	-0.4
4,225,025	-		Sama_3593	0.18	-0.7
4,225,025	-		Sama_3593	0.18	+0.4
4,225,025	-		Sama_3593	0.18	+0.8
4,225,028	+		Sama_3593	0.19	-0.2
4,225,028	+		Sama_3593	0.19	+0.2
4,225,028	+		Sama_3593	0.19	+0.8
4,225,028	+		Sama_3593	0.19	-0.9
4,225,028	+		Sama_3593	0.19	-1.6
4,225,028	+		Sama_3593	0.19	-1.1
4,225,029	-		Sama_3593	0.19	-0.1
4,225,029	-		Sama_3593	0.19	-1.6
4,225,029	-		Sama_3593	0.19	+0.3
4,225,029	-		Sama_3593	0.19	+0.2
4,225,029	-		Sama_3593	0.19	+1.0
4,225,029	-		Sama_3593	0.19	+0.3
4,225,083	+		Sama_3593	0.24	-0.3
4,225,083	+		Sama_3593	0.24	+0.6
4,225,159	-		Sama_3593	0.31	-0.6
4,225,179	+		Sama_3593	0.33	+0.2
4,225,209	+		Sama_3593	0.36	-1.9
4,225,209	+		Sama_3593	0.36	-0.4
4,225,209	+		Sama_3593	0.36	-2.3
4,225,210	-		Sama_3593	0.36	-0.1
4,225,210	-		Sama_3593	0.36	+0.6
4,225,210	-		Sama_3593	0.36	+0.2
4,225,243	+		Sama_3593	0.40	+0.2
4,225,244	-		Sama_3593	0.40	-0.3
4,225,244	-		Sama_3593	0.40	+1.2
4,225,244	-		Sama_3593	0.40	+0.1
4,225,295	-		Sama_3593	0.45	+0.2
4,225,316	+		Sama_3593	0.47	+1.0
4,225,316	+		Sama_3593	0.47	+1.5
4,225,316	+		Sama_3593	0.47	+0.8
4,225,316	+		Sama_3593	0.47	+0.2
4,225,316	+		Sama_3593	0.47	-0.3
4,225,317	-		Sama_3593	0.47	-1.1
4,225,317	-		Sama_3593	0.47	-1.2
4,225,317	-		Sama_3593	0.47	+1.2
4,225,317	-		Sama_3593	0.47	-1.0
4,225,386	+		Sama_3593	0.54	-0.9
4,225,474	+		Sama_3593	0.62	-0.5
4,225,474	+		Sama_3593	0.62	-0.2
4,225,475	-		Sama_3593	0.62	-0.2
4,225,475	-		Sama_3593	0.62	+0.8
4,225,533	+		Sama_3593	0.68	+0.1
4,225,533	+		Sama_3593	0.68	-0.9
4,225,533	+		Sama_3593	0.68	+1.6
4,225,533	+		Sama_3593	0.68	-1.4
4,225,533	+		Sama_3593	0.68	-0.2
4,225,533	+		Sama_3593	0.68	+2.2
4,225,533	+		Sama_3593	0.68	-0.6
4,225,533	+		Sama_3593	0.68	-1.7
4,225,533	+		Sama_3593	0.68	-0.8
4,225,533	+		Sama_3593	0.68	+0.2
4,225,534	-		Sama_3593	0.68	-0.6
4,225,534	-		Sama_3593	0.68	+0.1
4,225,534	-		Sama_3593	0.68	-0.4
4,225,534	-		Sama_3593	0.68	-0.7
4,225,534	-		Sama_3593	0.68	+0.4
4,225,593	+		Sama_3593	0.74	+0.6
4,225,594	-		Sama_3593	0.74	-0.0
4,225,608	+		Sama_3593	0.75	-1.2
4,225,608	+		Sama_3593	0.75	-0.4
4,225,609	-		Sama_3593	0.75	-1.9
4,225,660	+		Sama_3593	0.80	-0.6
4,225,660	+		Sama_3593	0.80	+1.8
4,225,660	+		Sama_3593	0.80	+1.1
4,225,661	-		Sama_3593	0.80	-1.6
4,225,661	-		Sama_3593	0.80	-0.0
4,225,661	-		Sama_3593	0.80	-1.1
4,225,661	-		Sama_3593	0.80	-0.5
4,225,703	+		Sama_3593	0.84	-1.7
4,225,703	+		Sama_3593	0.84	-0.2
4,225,703	+		Sama_3593	0.84	+2.8
4,225,704	-		Sama_3593	0.84	-1.0
4,225,704	-		Sama_3593	0.84	-0.6
4,225,704	-		Sama_3593	0.84	-0.9
4,225,726	+		Sama_3593	0.87	-0.1
4,225,726	+		Sama_3593	0.87	-0.0
4,225,727	-		Sama_3593	0.87	-0.0
4,225,727	-		Sama_3593	0.87	-0.8
4,225,727	-		Sama_3593	0.87	-0.8
4,225,727	-		Sama_3593	0.87	-1.0
4,225,754	+		Sama_3593	0.89	+1.2
4,225,754	+		Sama_3593	0.89	-0.3
4,225,754	+		Sama_3593	0.89	+0.3
4,225,754	+		Sama_3593	0.89	+1.4
4,225,754	+		Sama_3593	0.89	-0.9
4,225,754	+		Sama_3593	0.89	-0.7
4,225,754	+		Sama_3593	0.89	+1.2
4,225,755	-		Sama_3593	0.89	+0.9
4,225,755	-		Sama_3593	0.89	-0.5
4,225,758	+		Sama_3593	0.90	+0.8
4,225,758	+		Sama_3593	0.90	-0.3
4,225,758	+		Sama_3593	0.90	-2.0
4,225,758	+		Sama_3593	0.90	+0.2
4,225,758	+		Sama_3593	0.90	-0.9
4,225,758	+		Sama_3593	0.90	-0.1
4,225,758	+		Sama_3593	0.90	-1.0
4,225,758	+		Sama_3593	0.90	+2.8
4,225,758	+		Sama_3593	0.90	-0.3
4,225,759	-		Sama_3593	0.90	+0.2
4,225,759	-		Sama_3593	0.90	-0.9
4,225,759	-		Sama_3593	0.90	+0.3
4,225,759	-		Sama_3593	0.90	+0.2
4,225,759	-		Sama_3593	0.90	+0.4
4,225,759	-		Sama_3593	0.90	-0.2
4,225,759	-		Sama_3593	0.90	-1.1
4,225,759	-		Sama_3593	0.90	-0.0
4,225,875	+				+0.0
4,225,881	+				-0.8
4,225,894	-				+2.2
4,225,912	-				-0.7
4,225,912	-				+0.7
4,225,912	-				-1.4
4,225,925	+				+0.4
4,225,953	+				-0.3
4,225,953	+				+1.2
4,225,953	+				-1.2
4,225,953	+				+0.3
4,225,954	-				-0.0
4,225,954	-				-2.2
4,225,954	-				-0.4
4,225,954	-				-0.7
4,225,954	-				-0.6
4,225,954	-				-1.6
4,226,002	+				+0.5
4,226,003	-				+2.0
4,226,020	+				-1.4
4,226,020	+				-1.2
4,226,021	-				-0.6
4,226,082	-				+0.2
4,226,082	-				+0.2
4,226,121	-				+0.4
4,226,121	-				-0.1
4,226,152	+				+0.1
4,226,187	+				+1.3
4,226,187	+				+1.0
4,226,187	+				-1.3
4,226,187	+				+0.4
4,226,188	-				-1.4
4,226,188	-				-0.1
4,226,188	-				+0.3
4,226,188	-				-0.2
4,226,307	+		Sama_3594	0.14	-0.4
4,226,334	+		Sama_3594	0.16	+1.4
4,226,334	+		Sama_3594	0.16	-1.1
4,226,335	-		Sama_3594	0.16	+0.2
4,226,335	-		Sama_3594	0.16	-0.8
4,226,403	+		Sama_3594	0.22	+1.8
4,226,403	+		Sama_3594	0.22	+1.8
4,226,518	+		Sama_3594	0.32	-1.1
4,226,518	+		Sama_3594	0.32	+0.4
4,226,518	+		Sama_3594	0.32	-0.0
4,226,518	+		Sama_3594	0.32	+0.8
4,226,519	-		Sama_3594	0.33	-1.4
4,226,519	-		Sama_3594	0.33	-1.2
4,226,526	-		Sama_3594	0.33	+0.1
4,226,526	-		Sama_3594	0.33	-0.0
4,226,526	-		Sama_3594	0.33	-0.4
4,226,526	-		Sama_3594	0.33	+2.2
4,226,607	-		Sama_3594	0.40	+0.4
4,226,621	+		Sama_3594	0.42	-1.1
4,226,622	-		Sama_3594	0.42	-0.7
4,226,695	+		Sama_3594	0.48	-1.1
4,226,695	+		Sama_3594	0.48	+0.4
4,226,696	-		Sama_3594	0.48	-0.9
4,226,696	-		Sama_3594	0.48	+0.1
4,226,696	-		Sama_3594	0.48	-2.0
4,226,696	-		Sama_3594	0.48	+0.4
4,226,696	-		Sama_3594	0.48	-0.0
4,226,723	+		Sama_3594	0.51	-0.4
4,226,724	-		Sama_3594	0.51	+2.8
4,226,804	+		Sama_3594	0.58	+1.0
4,226,804	+		Sama_3594	0.58	-1.2
4,226,804	+		Sama_3594	0.58	+0.1
4,226,805	-		Sama_3594	0.58	-0.6
4,226,805	-		Sama_3594	0.58	-0.9
4,226,805	-		Sama_3594	0.58	-0.9
4,226,829	+		Sama_3594	0.60	-0.9
4,226,829	+		Sama_3594	0.60	-0.1
4,226,829	+		Sama_3594	0.60	-1.2
4,226,829	+		Sama_3594	0.60	-0.8
4,226,829	+		Sama_3594	0.60	-0.3
4,226,830	-		Sama_3594	0.60	-0.2
4,226,837	+		Sama_3594	0.61	-0.8
4,226,837	+		Sama_3594	0.61	+0.8