Strain Fitness in Shewanella amazonensis SB2B around Sama_3178

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,767,048	+		Sama_3177	0.85	+0.5
3,767,048	+		Sama_3177	0.85	+0.1
3,767,048	+		Sama_3177	0.85	+2.6
3,767,049	-		Sama_3177	0.85	-0.3
3,767,049	-		Sama_3177	0.85	+0.9
3,767,049	-		Sama_3177	0.85	-0.0
3,767,085	+		Sama_3177	0.87	-0.7
3,767,104	+		Sama_3177	0.88	+0.7
3,767,104	+		Sama_3177	0.88	-0.4
3,767,104	+		Sama_3177	0.88	-0.0
3,767,104	+		Sama_3177	0.88	+1.6
3,767,104	+		Sama_3177	0.88	+0.2
3,767,105	-		Sama_3177	0.88	-0.4
3,767,105	-		Sama_3177	0.88	-1.6
3,767,139	+		Sama_3177	0.89	+1.6
3,767,139	+		Sama_3177	0.89	-1.4
3,767,139	+		Sama_3177	0.89	-0.0
3,767,139	+		Sama_3177	0.89	-0.0
3,767,139	+		Sama_3177	0.89	+0.7
3,767,139	+		Sama_3177	0.89	-0.3
3,767,139	+		Sama_3177	0.89	-1.8
3,767,139	+		Sama_3177	0.89	-0.0
3,767,139	+		Sama_3177	0.89	-0.2
3,767,139	+		Sama_3177	0.89	-1.4
3,767,139	+		Sama_3177	0.89	+0.2
3,767,140	-		Sama_3177	0.89	-0.4
3,767,140	-		Sama_3177	0.89	+0.9
3,767,140	-		Sama_3177	0.89	+0.2
3,767,140	-		Sama_3177	0.89	+3.6
3,767,140	-		Sama_3177	0.89	+2.6
3,767,140	-		Sama_3177	0.89	-0.8
3,767,140	-		Sama_3177	0.89	-2.0
3,767,140	-		Sama_3177	0.89	-0.4
3,767,140	-		Sama_3177	0.89	-2.3
3,767,140	-		Sama_3177	0.89	+0.1
3,767,180	+				+0.8
3,767,180	+				-2.0
3,767,182	+				-0.6
3,767,182	+				+0.6
3,767,182	+				+1.6
3,767,182	+				-0.0
3,767,182	+				+0.6
3,767,183	-				+1.4
3,767,183	-				-0.8
3,767,183	-				+2.6
3,767,183	-				-0.6
3,767,183	-				+0.7
3,767,183	-				+1.6
3,767,183	-				-0.1
3,767,246	+				+1.6
3,767,247	-				-0.3
3,767,382	+				+0.2
3,767,382	+				-0.8
3,767,382	+				-0.0
3,767,382	+				+0.2
3,767,383	-				-1.6
3,767,383	-				-0.4
3,767,383	-				-0.7
3,767,383	-				+0.2
3,767,383	-				-1.1
3,767,383	-				+0.6
3,767,467	+				-1.3
3,767,501	+				-1.8
3,767,502	-				-0.6
3,767,518	+				-1.5
3,767,519	-				-0.4
3,767,519	-				-0.8
3,767,519	-				-0.6
3,767,519	-				-0.4
3,767,548	+				-1.0
3,767,549	-				-2.0
3,767,549	-				+1.1
3,767,566	+				-0.4
3,767,567	-				-0.5
3,767,567	-				-0.0
3,767,609	+				+0.6
3,767,610	-				-0.6
3,767,610	-				-1.1
3,767,610	-				+1.2
3,767,656	+				+0.7
3,767,657	-				+0.2
3,767,657	-				+0.7
3,767,657	-				+0.4
3,767,657	-				+0.1
3,767,667	-				-0.3
3,767,721	+				-1.3
3,767,721	+				-2.9
3,767,721	+				-1.1
3,767,722	-				+0.2
3,767,722	-				+0.2
3,767,722	-				+0.1
3,767,722	-				-0.6
3,767,722	-				+2.0
3,767,735	+				-0.9
3,767,805	-				-1.0
3,767,808	+				+1.8
3,767,833	-				+3.1
3,767,918	-				-2.0
3,767,918	-				+1.2
3,767,931	-				-0.9
3,768,075	+		Sama_3178	0.20	-1.1
3,768,075	+		Sama_3178	0.20	-0.1
3,768,094	-		Sama_3178	0.25	-1.4
3,768,109	-		Sama_3178	0.30	-0.9
3,768,109	-		Sama_3178	0.30	+0.2
3,768,118	+		Sama_3178	0.33	+1.1
3,768,118	+		Sama_3178	0.33	+0.2
3,768,118	+		Sama_3178	0.33	-1.2
3,768,119	-		Sama_3178	0.33	-0.4
3,768,119	-		Sama_3178	0.33	+1.0
3,768,119	-		Sama_3178	0.33	-1.4
3,768,119	-		Sama_3178	0.33	-0.7
3,768,221	-		Sama_3178	0.64	-0.2
3,768,222	+		Sama_3178	0.64	-1.1
3,768,223	-		Sama_3178	0.65	-0.6
3,768,245	+		Sama_3178	0.71	+1.0
3,768,246	-		Sama_3178	0.72	-0.7
3,768,246	-		Sama_3178	0.72	+0.1
3,768,246	-		Sama_3178	0.72	-0.6
3,768,281	+		Sama_3178	0.82	+0.2
3,768,282	-		Sama_3178	0.82	-0.0
3,768,282	-		Sama_3178	0.82	-2.6
3,768,295	+		Sama_3178	0.86	-1.3
3,768,296	-		Sama_3178	0.87	-0.3
3,768,296	-		Sama_3178	0.87	+0.4
3,768,351	+				-2.8
3,768,369	-				+0.6
3,768,434	+				-1.3
3,768,434	+				-1.8
3,768,434	+				-2.1
3,768,434	+				+1.6
3,768,434	+				-0.5
3,768,435	-				-0.6
3,768,435	-				-1.4
3,768,435	-				-2.5
3,768,476	+				-0.9
3,768,476	+				-0.1
3,768,476	+				+0.0
3,768,476	+				+1.0
3,768,476	+				-0.3
3,768,477	-				-0.3
3,768,477	-				-0.4
3,768,477	-				-1.1
3,768,477	-				-0.4
3,768,483	-				+0.8
3,768,488	+				+0.2
3,768,488	+				+1.5
3,768,488	+				-0.2
3,768,488	+				-0.8
3,768,488	+				-0.4
3,768,488	+				-0.4
3,768,489	-				+0.2
3,768,489	-				+0.3
3,768,489	-				-0.3
3,768,489	-				+0.4
3,768,489	-				-0.8
3,768,489	-				-0.0
3,768,489	-				-0.0
3,768,521	+				-0.1
3,768,522	-				-1.0
3,768,522	-				+0.1
3,768,522	-				+1.2
3,768,529	+				+1.0
3,768,530	-				-1.3
3,768,572	+				+0.7
3,768,573	-				-0.9
3,768,573	-				+0.1
3,768,733	-		Sama_3179	0.18	+0.1
3,768,936	+		Sama_3179	0.29	-1.4
3,768,936	+		Sama_3179	0.29	-0.4
3,768,936	+		Sama_3179	0.29	-1.4
3,768,936	+		Sama_3179	0.29	-0.4
3,768,936	-		Sama_3179	0.29	-0.8
3,768,936	+		Sama_3179	0.29	-0.7
3,768,936	+		Sama_3179	0.29	-0.4
3,768,936	+		Sama_3179	0.29	-0.7
3,768,936	+		Sama_3179	0.29	-1.4
3,768,936	+		Sama_3179	0.29	-0.6
3,768,936	+		Sama_3179	0.29	-1.8
3,768,936	+		Sama_3179	0.29	+1.2
3,768,937	-		Sama_3179	0.29	-0.0
3,768,937	-		Sama_3179	0.29	-0.5
3,768,937	-		Sama_3179	0.29	-0.6
3,768,937	-		Sama_3179	0.29	+0.0
3,768,937	-		Sama_3179	0.29	-1.3
3,768,960	+		Sama_3179	0.30	-0.6
3,768,960	+		Sama_3179	0.30	-0.0
3,768,961	-		Sama_3179	0.30	-0.0
3,768,961	-		Sama_3179	0.30	-0.8
3,768,961	-		Sama_3179	0.30	-1.0
3,768,961	-		Sama_3179	0.30	-1.3
3,768,997	+		Sama_3179	0.32	-1.4
3,768,997	+		Sama_3179	0.32	-1.9
3,768,997	+		Sama_3179	0.32	-0.0
3,768,997	+		Sama_3179	0.32	-0.8
3,768,998	-		Sama_3179	0.33	+1.3
3,768,998	-		Sama_3179	0.33	+0.4
3,769,035	+		Sama_3179	0.35	-0.9
3,769,035	+		Sama_3179	0.35	+0.1
3,769,035	+		Sama_3179	0.35	-0.4
3,769,036	-		Sama_3179	0.35	-1.5
3,769,036	-		Sama_3179	0.35	+0.2
3,769,056	-		Sama_3179	0.36	-1.1
3,769,069	+		Sama_3179	0.36	-0.3
3,769,141	+		Sama_3179	0.40	+0.4
3,769,142	-		Sama_3179	0.40	-1.4
3,769,152	+		Sama_3179	0.41	+1.2
3,769,152	+		Sama_3179	0.41	-1.5
3,769,152	+		Sama_3179	0.41	-0.3
3,769,153	-		Sama_3179	0.41	+1.3
3,769,188	+		Sama_3179	0.43	-1.7
3,769,188	+		Sama_3179	0.43	+0.2
3,769,188	+		Sama_3179	0.43	+0.2
3,769,188	+		Sama_3179	0.43	-0.4
3,769,189	-		Sama_3179	0.43	-1.0
3,769,189	-		Sama_3179	0.43	-0.9
3,769,189	-		Sama_3179	0.43	+1.3
3,769,189	-		Sama_3179	0.43	-0.6
3,769,189	-		Sama_3179	0.43	-0.2
3,769,189	-		Sama_3179	0.43	+0.1
3,769,218	+		Sama_3179	0.45	-0.0
3,769,218	+		Sama_3179	0.45	-0.6
3,769,218	+		Sama_3179	0.45	-0.3
3,769,218	+		Sama_3179	0.45	+0.2
3,769,218	+		Sama_3179	0.45	+1.1
3,769,218	+		Sama_3179	0.45	-0.0
3,769,219	-		Sama_3179	0.45	+0.7
3,769,219	-		Sama_3179	0.45	+0.3
3,769,219	-		Sama_3179	0.45	-1.4
3,769,219	-		Sama_3179	0.45	-0.7
3,769,219	-		Sama_3179	0.45	+0.8
3,769,219	-		Sama_3179	0.45	-0.8
3,769,219	-		Sama_3179	0.45	-1.1
3,769,219	-		Sama_3179	0.45	-0.4
3,769,219	-		Sama_3179	0.45	+0.7
3,769,219	-		Sama_3179	0.45	-0.4
3,769,290	-		Sama_3179	0.49	-0.8
3,769,290	-		Sama_3179	0.49	+0.2
3,769,290	-		Sama_3179	0.49	-0.3
3,769,290	-		Sama_3179	0.49	-0.4
3,769,315	-		Sama_3179	0.50	-1.4
3,769,315	-		Sama_3179	0.50	-0.9
3,769,315	-		Sama_3179	0.50	+0.6
3,769,316	+		Sama_3179	0.50	-1.4
3,769,316	+		Sama_3179	0.50	+0.1
3,769,316	+		Sama_3179	0.50	-0.0
3,769,316	+		Sama_3179	0.50	+2.0
3,769,316	+		Sama_3179	0.50	+0.2
3,769,316	+		Sama_3179	0.50	-0.7
3,769,316	+		Sama_3179	0.50	+0.6
3,769,316	+		Sama_3179	0.50	+0.7
3,769,317	-		Sama_3179	0.50	+0.9
3,769,317	-		Sama_3179	0.50	+0.6
3,769,317	-		Sama_3179	0.50	-1.1