Strain Fitness in Shewanella amazonensis SB2B around Sama_3100

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,673,176	+				+0.7
3,673,176	+				-0.3
3,673,256	+				-0.6
3,673,256	+				-0.2
3,673,256	+				-1.5
3,673,257	-				-0.1
3,673,257	-				-0.3
3,673,262	+				+0.6
3,673,262	+				-0.5
3,673,263	-				+0.3
3,673,263	-				-0.8
3,673,263	-				+0.5
3,673,263	-				+0.5
3,673,267	+				+0.7
3,673,267	+				+0.9
3,673,268	-				-0.5
3,673,268	-				-1.0
3,673,268	-				+0.1
3,673,268	-				+0.6
3,673,310	+				+1.1
3,673,310	+				-0.1
3,673,311	-				+2.5
3,673,311	-				-1.3
3,673,311	-				+1.2
3,673,332	+				-0.5
3,673,372	+				+0.2
3,673,373	-				-0.5
3,673,383	+				+0.9
3,673,384	-				+1.5
3,673,442	+		Sama_3099	0.16	+0.2
3,673,443	+		Sama_3099	0.16	+0.7
3,673,443	+		Sama_3099	0.16	+1.1
3,673,443	+		Sama_3099	0.16	-0.3
3,673,443	+		Sama_3099	0.16	+1.1
3,673,443	+		Sama_3099	0.16	-0.7
3,673,443	+		Sama_3099	0.16	-0.1
3,673,444	-		Sama_3099	0.16	-0.2
3,673,477	+		Sama_3099	0.21	-1.0
3,673,478	-		Sama_3099	0.21	-1.0
3,673,545	+		Sama_3099	0.31	-0.4
3,673,574	+		Sama_3099	0.35	-0.2
3,673,575	-		Sama_3099	0.35	+0.3
3,673,622	+		Sama_3099	0.42	-1.5
3,673,726	-		Sama_3099	0.57	-0.9
3,673,726	-		Sama_3099	0.57	+0.9
3,673,726	-		Sama_3099	0.57	-0.6
3,673,787	-		Sama_3099	0.66	-1.0
3,673,878	-		Sama_3099	0.79	+0.8
3,673,878	-		Sama_3099	0.79	+0.5
3,673,878	-		Sama_3099	0.79	-0.0
3,673,893	-		Sama_3099	0.81	-1.3
3,673,907	+		Sama_3099	0.83	+0.5
3,673,907	+		Sama_3099	0.83	+0.7
3,673,907	+		Sama_3099	0.83	-0.4
3,673,907	+		Sama_3099	0.83	-2.5
3,673,907	+		Sama_3099	0.83	-1.2
3,673,907	+		Sama_3099	0.83	-1.6
3,673,907	+		Sama_3099	0.83	-0.7
3,673,908	-		Sama_3099	0.83	-1.3
3,673,908	-		Sama_3099	0.83	+0.6
3,673,908	-		Sama_3099	0.83	-1.4
3,673,908	-		Sama_3099	0.83	+1.2
3,673,908	-		Sama_3099	0.83	-0.7
3,673,908	-		Sama_3099	0.83	-0.5
3,673,908	-		Sama_3099	0.83	+1.2
3,673,908	-		Sama_3099	0.83	-0.5
3,673,908	-		Sama_3099	0.83	-0.6
3,673,911	+		Sama_3099	0.84	+0.3
3,673,911	+		Sama_3099	0.84	-0.5
3,673,911	+		Sama_3099	0.84	+0.3
3,673,911	+		Sama_3099	0.84	+0.7
3,673,911	+		Sama_3099	0.84	+0.3
3,673,911	+		Sama_3099	0.84	-0.7
3,673,911	+		Sama_3099	0.84	-1.3
3,673,911	+		Sama_3099	0.84	+0.2
3,673,911	+		Sama_3099	0.84	+1.2
3,673,912	-		Sama_3099	0.84	-0.1
3,673,912	-		Sama_3099	0.84	+1.0
3,673,912	-		Sama_3099	0.84	+1.0
3,673,912	-		Sama_3099	0.84	-1.3
3,673,912	-		Sama_3099	0.84	-0.7
3,673,912	-		Sama_3099	0.84	-1.0
3,673,912	-		Sama_3099	0.84	-2.0
3,673,912	-		Sama_3099	0.84	+0.9
3,673,912	-		Sama_3099	0.84	+0.2
3,673,912	-		Sama_3099	0.84	-1.0
3,673,912	-		Sama_3099	0.84	-0.6
3,673,912	-		Sama_3099	0.84	-0.8
3,673,912	-		Sama_3099	0.84	+1.9
3,673,912	-		Sama_3099	0.84	+0.5
3,673,917	+		Sama_3099	0.85	-0.8
3,673,917	+		Sama_3099	0.85	-1.1
3,673,917	+		Sama_3099	0.85	+0.5
3,673,917	+		Sama_3099	0.85	-1.2
3,673,917	+		Sama_3099	0.85	+0.2
3,673,918	-		Sama_3099	0.85	+0.9
3,673,918	-		Sama_3099	0.85	-1.5
3,673,918	-		Sama_3099	0.85	-1.1
3,673,953	+		Sama_3099	0.90	+2.5
3,673,953	+		Sama_3099	0.90	+0.6
3,673,953	+		Sama_3099	0.90	-0.1
3,673,953	+		Sama_3099	0.90	+1.7
3,673,953	+		Sama_3099	0.90	-1.0
3,673,953	+		Sama_3099	0.90	-0.8
3,673,953	+		Sama_3099	0.90	+0.2
3,673,953	+		Sama_3099	0.90	-0.3
3,673,954	-				-0.3
3,673,954	-				-1.7
3,673,954	-				-0.3
3,673,954	-				-0.3
3,673,967	+				-1.2
3,673,967	+				-1.9
3,673,968	-				-0.1
3,673,968	-				+1.0
3,674,009	+				+0.2
3,674,009	+				+0.9
3,674,010	-				-0.8
3,674,010	-				-2.8
3,674,017	+				-0.6
3,674,018	-				+1.5
3,674,033	+				-0.1
3,674,033	+				-1.3
3,674,033	+				-2.0
3,674,034	-				+0.0
3,674,067	+				+0.9
3,674,068	-				-0.3
3,674,068	-				-0.2
3,674,097	+				-0.6
3,674,097	+				+0.2
3,674,117	+				-1.6
3,674,117	+				+0.7
3,674,156	-				+1.3
3,674,156	-				-1.1
3,674,162	+				+0.0
3,674,163	-		Sama_3100	0.10	+0.0
3,674,163	-		Sama_3100	0.10	+0.4
3,674,296	+		Sama_3100	0.35	-0.5
3,674,297	-		Sama_3100	0.35	+1.8
3,674,303	+		Sama_3100	0.36	-1.8
3,674,330	+		Sama_3100	0.41	+3.1
3,674,521	+		Sama_3100	0.76	+0.7
3,674,572	-		Sama_3100	0.86	+0.9
3,674,572	-		Sama_3100	0.86	-1.0
3,674,585	+		Sama_3100	0.88	+0.5
3,674,586	-		Sama_3100	0.88	-0.4
3,674,586	-		Sama_3100	0.88	+2.2
3,674,586	-		Sama_3100	0.88	-1.0
3,674,586	-		Sama_3100	0.88	-0.7
3,674,592	+		Sama_3100	0.89	+1.9
3,674,592	+		Sama_3100	0.89	-0.1
3,674,593	-		Sama_3100	0.90	+0.4
3,674,593	-		Sama_3100	0.90	+0.2
3,674,593	-		Sama_3100	0.90	-1.4
3,674,606	+				-0.5
3,674,606	+				-1.4
3,674,606	+				-3.2
3,674,607	-				+0.9
3,674,607	-				+2.1
3,674,607	-				-1.7
3,674,612	+				-0.5
3,674,613	-				+0.2
3,674,613	-				-0.8
3,674,630	+				-0.3
3,674,630	+				+0.1
3,674,695	+				-0.3
3,674,695	+				-0.6
3,674,695	+				+0.5
3,674,695	+				-1.4
3,674,696	-				-0.0
3,674,752	-				+0.9
3,674,761	+				-0.5
3,674,762	-				+0.7
3,674,762	-				-0.8
3,674,762	-				-0.5
3,674,766	+				+0.3
3,674,766	+				+0.7
3,674,767	-				-0.6
3,674,778	+				+0.2
3,674,785	+				+1.0
3,674,786	-				-0.5
3,674,786	-				-0.5
3,674,786	-				+0.5
3,674,790	+				-0.7
3,674,790	+				-1.4
3,674,790	+				+1.2
3,674,791	-				+1.2
3,674,791	-				+0.6
3,674,791	-				-0.5
3,674,826	+				-1.3
3,674,827	-				-0.3
3,674,827	-				+1.0
3,674,827	-				-1.2
3,674,827	-				-0.7
3,674,837	+				+0.9
3,674,838	-				-0.8
3,674,838	-				+0.3
3,674,846	-				-1.1
3,674,846	-				-0.7
3,674,950	+		Sama_3101	0.12	+0.7
3,674,950	+		Sama_3101	0.12	-2.0
3,674,951	-		Sama_3101	0.12	+0.9
3,674,951	-		Sama_3101	0.12	-0.2
3,674,951	-		Sama_3101	0.12	+0.5
3,674,951	-		Sama_3101	0.12	-1.2
3,674,951	-		Sama_3101	0.12	+0.6
3,674,951	-		Sama_3101	0.12	-1.2
3,674,951	-		Sama_3101	0.12	-0.2
3,674,951	-		Sama_3101	0.12	-1.0
3,674,951	-		Sama_3101	0.12	+0.9
3,674,951	-		Sama_3101	0.12	+0.9
3,674,951	-		Sama_3101	0.12	-0.0
3,674,955	+		Sama_3101	0.13	+0.2
3,674,985	-		Sama_3101	0.15	+0.1
3,675,041	-		Sama_3101	0.20	-0.5
3,675,041	-		Sama_3101	0.20	-0.7
3,675,066	+		Sama_3101	0.22	+1.2
3,675,066	+		Sama_3101	0.22	-0.4
3,675,067	-		Sama_3101	0.22	-0.5
3,675,067	-		Sama_3101	0.22	-2.4
3,675,067	-		Sama_3101	0.22	+0.2
3,675,067	-		Sama_3101	0.22	-0.2
3,675,067	-		Sama_3101	0.22	+0.7
3,675,067	-		Sama_3101	0.22	-0.1
3,675,099	+		Sama_3101	0.25	-0.9
3,675,099	+		Sama_3101	0.25	-2.5
3,675,099	+		Sama_3101	0.25	-0.1
3,675,099	+		Sama_3101	0.25	+1.5
3,675,099	+		Sama_3101	0.25	+0.9
3,675,099	+		Sama_3101	0.25	-1.0
3,675,100	-		Sama_3101	0.25	+1.1
3,675,100	-		Sama_3101	0.25	-0.8
3,675,100	-		Sama_3101	0.25	-0.7
3,675,100	-		Sama_3101	0.25	+1.7
3,675,100	-		Sama_3101	0.25	-2.0
3,675,100	-		Sama_3101	0.25	-1.1
3,675,100	-		Sama_3101	0.25	-2.9
3,675,107	+		Sama_3101	0.26	+0.4
3,675,108	-		Sama_3101	0.26	+0.5
3,675,115	-		Sama_3101	0.26	+0.5
3,675,154	+		Sama_3101	0.30	+0.2
3,675,155	-		Sama_3101	0.30	-0.2
3,675,155	-		Sama_3101	0.30	-0.8
3,675,214	+		Sama_3101	0.35	+0.9
3,675,214	+		Sama_3101	0.35	-1.0
3,675,214	+		Sama_3101	0.35	-0.5
3,675,215	-		Sama_3101	0.35	-0.4
3,675,215	-		Sama_3101	0.35	-0.8
3,675,225	+		Sama_3101	0.36	-1.5
3,675,225	+		Sama_3101	0.36	-2.2
3,675,225	+		Sama_3101	0.36	+0.3
3,675,226	-		Sama_3101	0.36	-0.8
3,675,226	-		Sama_3101	0.36	-0.3
3,675,226	-		Sama_3101	0.36	+0.2
3,675,228	+		Sama_3101	0.36	-0.3
3,675,228	+		Sama_3101	0.36	-0.3
3,675,228	+		Sama_3101	0.36	+0.2
3,675,228	+		Sama_3101	0.36	+1.5
3,675,229	-		Sama_3101	0.36	+0.6
3,675,327	+		Sama_3101	0.44	-0.5
3,675,328	-		Sama_3101	0.44	-0.1
3,675,384	+		Sama_3101	0.49	+0.0
3,675,385	-		Sama_3101	0.49	-0.8
3,675,393	+		Sama_3101	0.50	-0.8
3,675,393	+		Sama_3101	0.50	-1.3
3,675,393	+		Sama_3101	0.50	+2.0
3,675,394	-		Sama_3101	0.50	-0.5
3,675,394	-		Sama_3101	0.50	+0.9
3,675,394	-		Sama_3101	0.50	+0.1
3,675,394	-		Sama_3101	0.50	-0.1
3,675,456	+		Sama_3101	0.55	+0.1
3,675,457	-		Sama_3101	0.55	-2.2
3,675,506	-		Sama_3101	0.59	+0.5
3,675,623	+		Sama_3101	0.69	+0.2
3,675,624	-		Sama_3101	0.69	-0.1