Strain Fitness in Shewanella amazonensis SB2B around Sama_2397

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
2,879,198	+				-1.4
2,879,198	+				+0.2
2,879,199	-				-0.3
2,879,206	+				-0.6
2,879,207	-				-1.6
2,879,207	-				+2.0
2,879,258	-				-0.1
2,879,286	+				-0.8
2,879,286	+				-1.1
2,879,286	+				-1.9
2,879,287	-				-1.7
2,879,287	-				-0.1
2,879,287	-				-1.5
2,879,287	-				+1.1
2,879,431	+				+0.3
2,879,431	+				-1.0
2,879,431	+				-2.4
2,879,431	+				+1.0
2,879,431	+				+0.8
2,879,431	+				-0.3
2,879,431	+				-0.5
2,879,431	+				-0.8
2,879,432	-				-0.8
2,879,432	-				-0.3
2,879,432	-				+1.0
2,879,432	-				+0.5
2,879,432	-				-0.5
2,879,438	+				-1.3
2,879,440	+				+0.0
2,879,440	+				-0.8
2,879,440	+				-1.5
2,879,441	-				+0.0
2,879,441	-				-0.1
2,879,441	-				-0.0
2,879,441	-				-2.4
2,879,441	-				-0.3
2,879,444	+				+0.9
2,879,444	+				+1.0
2,879,444	+				+0.5
2,879,444	+				-0.8
2,879,444	+				+0.0
2,879,444	+				+2.0
2,879,444	+				-0.6
2,879,444	+				-0.4
2,879,444	+				-0.4
2,879,444	+				-0.7
2,879,444	+				+0.5
2,879,444	+				-0.5
2,879,444	+				-0.8
2,879,445	-				+0.1
2,879,445	-				+0.8
2,879,445	-				-0.5
2,879,445	-				-1.7
2,879,445	-				+1.0
2,879,445	-				-0.5
2,879,445	-				-2.2
2,879,454	+				-1.1
2,879,455	-				+1.0
2,879,474	+				+0.0
2,879,474	+				-0.4
2,879,474	+				-0.6
2,879,474	+				-1.3
2,879,474	+				-1.1
2,879,475	-				+3.6
2,879,475	-				-0.5
2,879,475	-				-0.8
2,879,475	-				-1.1
2,879,475	-				+0.6
2,879,523	+				+0.5
2,879,524	-				+0.0
2,879,546	+				-1.0
2,879,546	+				-1.4
2,879,547	-				+1.6
2,879,547	-				-0.1
2,879,547	-				-2.5
2,879,547	-				-0.3
2,879,556	+				-1.1
2,879,556	+				-1.8
2,879,556	+				-1.8
2,879,556	+				+0.7
2,879,557	-				-0.9
2,879,557	-				-1.1
2,879,557	-				-0.8
2,879,557	-				+0.8
2,879,557	-				-1.3
2,879,557	-				-1.7
2,879,568	+				-0.8
2,879,569	-				-0.5
2,879,569	-				+0.0
2,879,636	+				-0.4
2,879,636	+				-0.8
2,879,636	+				-1.4
2,879,636	+				-1.5
2,879,637	-				-0.9
2,879,637	-				-1.0
2,879,637	-				+1.3
2,879,637	-				+1.0
2,879,646	-				+0.8
2,879,695	-		Sama_2396	0.15	+1.6
2,879,735	+		Sama_2396	0.22	-0.5
2,879,735	+		Sama_2396	0.22	+0.0
2,879,736	-		Sama_2396	0.22	-0.3
2,879,747	+		Sama_2396	0.24	-0.7
2,879,756	+		Sama_2396	0.25	+0.5
2,879,756	+		Sama_2396	0.25	+1.0
2,879,756	+		Sama_2396	0.25	+1.0
2,879,756	+		Sama_2396	0.25	-2.2
2,879,757	-		Sama_2396	0.26	-1.6
2,879,801	+		Sama_2396	0.33	+0.5
2,879,804	+		Sama_2396	0.34	-0.1
2,879,815	-		Sama_2396	0.36	-0.5
2,879,848	+		Sama_2396	0.41	-1.0
2,879,848	+		Sama_2396	0.41	-1.5
2,879,848	+		Sama_2396	0.41	+0.5
2,879,848	+		Sama_2396	0.41	+0.6
2,879,848	+		Sama_2396	0.41	+0.0
2,879,848	+		Sama_2396	0.41	+0.5
2,879,849	-		Sama_2396	0.41	+0.5
2,879,849	-		Sama_2396	0.41	-1.3
2,879,849	-		Sama_2396	0.41	+0.5
2,879,849	-		Sama_2396	0.41	-0.5
2,879,849	-		Sama_2396	0.41	-0.7
2,879,924	+		Sama_2396	0.54	-0.8
2,879,924	+		Sama_2396	0.54	-1.3
2,879,924	+		Sama_2396	0.54	-2.1
2,879,924	+		Sama_2396	0.54	-0.3
2,879,925	-		Sama_2396	0.54	-0.5
2,879,925	-		Sama_2396	0.54	-0.4
2,879,925	-		Sama_2396	0.54	-0.3
2,879,925	-		Sama_2396	0.54	+0.3
2,879,925	-		Sama_2396	0.54	-0.4
2,879,925	-		Sama_2396	0.54	-0.4
2,879,926	+		Sama_2396	0.55	-1.0
2,879,926	+		Sama_2396	0.55	-0.7
2,879,926	+		Sama_2396	0.55	+0.0
2,879,926	+		Sama_2396	0.55	-1.1
2,879,926	+		Sama_2396	0.55	-0.1
2,879,927	-		Sama_2396	0.55	-0.3
2,879,927	-		Sama_2396	0.55	-0.8
2,879,927	-		Sama_2396	0.55	-0.1
2,879,927	-		Sama_2396	0.55	+2.0
2,879,927	-		Sama_2396	0.55	+0.0
2,879,928	+		Sama_2396	0.55	+0.5
2,879,928	+		Sama_2396	0.55	+0.7
2,879,928	+		Sama_2396	0.55	-0.5
2,879,929	-		Sama_2396	0.55	+0.0
2,879,929	-		Sama_2396	0.55	+1.8
2,879,929	-		Sama_2396	0.55	-1.3
2,879,929	-		Sama_2396	0.55	+0.6
2,879,929	-		Sama_2396	0.55	-2.4
2,879,929	-		Sama_2396	0.55	+0.5
2,879,929	-		Sama_2396	0.55	+0.0
2,879,929	-		Sama_2396	0.55	+0.6
2,879,929	-		Sama_2396	0.55	-0.5
2,879,980	-		Sama_2396	0.64	+0.2
2,879,980	-		Sama_2396	0.64	-1.4
2,879,980	-		Sama_2396	0.64	-2.5
2,880,046	+		Sama_2396	0.75	+0.5
2,880,059	-		Sama_2396	0.77	-0.8
2,880,230	+				-2.1
2,880,230	+				-1.3
2,880,230	+				+0.5
2,880,231	-				-0.3
2,880,231	-				-1.6
2,880,274	+				-0.5
2,880,274	+				-1.2
2,880,274	+				-1.0
2,880,274	+				+0.5
2,880,274	+				-1.4
2,880,274	+				-0.5
2,880,274	+				+0.7
2,880,274	+				-0.9
2,880,274	+				+2.0
2,880,275	-				-0.9
2,880,275	-				+0.5
2,880,275	-				-0.5
2,880,275	-				+1.0
2,880,275	-				-2.4
2,880,275	-				+0.5
2,880,275	-				-0.7
2,880,275	-				-0.2
2,880,275	-				-1.1
2,880,275	-				-0.5
2,880,300	+				+0.9
2,880,300	+				-0.5
2,880,300	+				+0.5
2,880,301	-				-1.8
2,880,301	-				+1.4
2,880,301	-				-2.3
2,880,305	+				-1.0
2,880,305	+				+2.3
2,880,306	-				-1.0
2,880,306	-				-0.1
2,880,317	+				-0.6
2,880,317	+				-0.8
2,880,317	+				+1.5
2,880,317	+				-1.0
2,880,317	+				+2.0
2,880,317	+				+0.2
2,880,317	+				-0.1
2,880,317	+				+0.3
2,880,317	+				-0.3
2,880,317	+				-1.4
2,880,317	+				-0.3
2,880,317	+				+1.0
2,880,317	+				-1.2
2,880,318	-				+0.5
2,880,318	-				+0.3
2,880,318	-				-1.0
2,880,318	-				-1.5
2,880,318	-				-0.8
2,880,318	-				-0.5
2,880,318	-				+1.6
2,880,337	+		Sama_2397	0.10	-1.7
2,880,337	+		Sama_2397	0.10	+0.2
2,880,351	+		Sama_2397	0.11	-0.3
2,880,352	-		Sama_2397	0.11	+1.0
2,880,401	-		Sama_2397	0.14	+2.0
2,880,422	-		Sama_2397	0.15	+0.0
2,880,461	+		Sama_2397	0.18	-0.1
2,880,461	+		Sama_2397	0.18	+0.5
2,880,461	+		Sama_2397	0.18	-1.0
2,880,491	+		Sama_2397	0.20	-0.8
2,880,491	+		Sama_2397	0.20	-1.3
2,880,491	+		Sama_2397	0.20	+0.6
2,880,492	-		Sama_2397	0.20	-2.3
2,880,535	+		Sama_2397	0.22	-1.3
2,880,535	+		Sama_2397	0.22	-0.2
2,880,535	+		Sama_2397	0.22	-0.3
2,880,535	+		Sama_2397	0.22	+0.0
2,880,535	+		Sama_2397	0.22	-1.0
2,880,535	+		Sama_2397	0.22	-1.9
2,880,535	+		Sama_2397	0.22	-1.3
2,880,535	+		Sama_2397	0.22	-1.3
2,880,536	-		Sama_2397	0.23	+1.3
2,880,536	-		Sama_2397	0.23	+0.5
2,880,678	-		Sama_2397	0.31	-0.3
2,880,729	+		Sama_2397	0.35	-0.5
2,880,730	-		Sama_2397	0.35	-1.0
2,880,872	+		Sama_2397	0.44	-2.1
2,880,873	-		Sama_2397	0.44	+0.0
2,880,913	+		Sama_2397	0.46	-0.8
2,880,913	+		Sama_2397	0.46	-0.5
2,880,913	+		Sama_2397	0.46	+0.5
2,880,914	-		Sama_2397	0.46	-1.7
2,880,950	+		Sama_2397	0.49	-0.5
2,880,951	-		Sama_2397	0.49	-0.3
2,880,968	+		Sama_2397	0.50	+3.0
2,880,969	-		Sama_2397	0.50	-0.3
2,881,181	+		Sama_2397	0.63	+0.2
2,881,511	+		Sama_2397	0.84	-0.4
2,881,512	-		Sama_2397	0.84	-0.9
2,881,543	+		Sama_2397	0.86	+0.0
2,881,544	-		Sama_2397	0.86	+0.0
2,881,544	-		Sama_2397	0.86	+0.5
2,881,568	-		Sama_2397	0.87	+0.9
2,881,598	+		Sama_2397	0.89	+0.5
2,881,598	+		Sama_2397	0.89	-0.7
2,881,598	+		Sama_2397	0.89	-2.4
2,881,599	-		Sama_2397	0.89	-0.3
2,881,627	+				-0.3
2,881,628	-				-2.0
2,881,628	-				-0.8
2,881,628	-				+1.0
2,881,628	-				-0.4
2,881,628	-				-0.3
2,881,686	-				-1.7
2,881,730	+				+0.2
2,881,743	-				-0.3
2,881,765	+				+1.5
2,881,766	-				-0.8
2,881,766	-				-0.5
2,881,767	+				+2.0
2,881,767	+				+0.0
2,881,767	+				-1.1
2,881,767	+				-1.9
2,881,774	+				-0.8
2,881,775	-				-0.3
2,881,846	-				-2.5
2,881,849	+				-0.2
2,881,850	-				-0.7
2,881,850	-				-0.3
2,881,851	+				-0.8
2,881,851	+				-1.1
2,881,851	+				-2.0
2,881,852	-				-1.1
2,881,852	-				-0.5
2,881,852	-				-1.3
2,881,852	-				-0.8
2,881,852	-				-0.3
2,881,852	-				-0.2
2,881,931	-		Sama_2398	0.31	-0.8
2,881,954	-		Sama_2398	0.39	-1.8
2,881,969	+		Sama_2398	0.44	-1.2
2,882,092	+		Sama_2398	0.88	-1.0
2,882,092	+		Sama_2398	0.88	-0.5
2,882,093	-		Sama_2398	0.88	+0.8
2,882,109	-				+0.6
2,882,112	+				-0.1
2,882,112	+				+2.0
2,882,113	-				-0.5
2,882,113	-				-0.2
2,882,128	+				-0.3
2,882,129	-				-0.3
2,882,242	+				-1.9
2,882,242	+				+0.0
2,882,269	-				-1.0
2,882,269	-				-0.8
2,882,351	+		Sama_2399	0.18	-1.3
2,882,355	+		Sama_2399	0.19	-0.9
2,882,356	-		Sama_2399	0.19	-1.8
2,882,356	-		Sama_2399	0.19	-0.1
2,882,356	-		Sama_2399	0.19	-0.5
2,882,376	-		Sama_2399	0.22	-0.8
2,882,571	+		Sama_2399	0.54	-0.7
2,882,571	+		Sama_2399	0.54	+0.8
2,882,572	-		Sama_2399	0.55	+2.4
2,882,595	-		Sama_2399	0.58	-1.0
2,882,676	-		Sama_2399	0.72	-0.3
2,882,697	+		Sama_2399	0.75	+1.5