Strain Fitness in Shewanella amazonensis SB2B around Sama_0950

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
1,149,861	-				+0.1
1,149,861	-				+0.7
1,149,861	-				+0.3
1,149,861	-				-0.1
1,149,873	-				+0.8
1,149,924	+				+0.6
1,149,925	-				+0.0
1,149,926	+				-0.3
1,149,926	+				-1.2
1,149,926	+				-0.7
1,149,927	-				+0.7
1,149,927	-				-0.3
1,149,927	-				-1.3
1,149,927	-				-0.4
1,149,929	+				+1.0
1,149,929	+				-0.7
1,149,929	+				+0.0
1,149,929	+				+0.2
1,149,930	-				-1.9
1,149,930	-				-0.1
1,149,930	-				+0.0
1,149,930	-				+0.1
1,149,930	-				-0.1
1,149,930	-				+0.8
1,149,930	-				-0.1
1,149,930	-				+0.7
1,149,931	+				-0.9
1,150,018	+				-0.1
1,150,018	+				-0.7
1,150,018	+				+0.1
1,150,019	-				-0.5
1,150,019	-				+0.2
1,150,019	-				+1.8
1,150,019	-				-0.7
1,150,031	-				-0.3
1,150,125	+				-1.1
1,150,126	-				-0.2
1,150,147	-				-0.1
1,150,168	+				+0.1
1,150,169	-				-0.7
1,150,187	+				+0.5
1,150,188	-				+1.2
1,150,208	+				-0.6
1,150,226	+				-1.6
1,150,226	+				+1.0
1,150,226	+				-1.6
1,150,226	+				-0.1
1,150,226	+				+0.6
1,150,226	+				-0.5
1,150,227	-				-1.1
1,150,227	-				-0.7
1,150,337	+		Sama_0949	0.20	+0.8
1,150,337	+		Sama_0949	0.20	-1.5
1,150,338	-		Sama_0949	0.20	-0.8
1,150,338	-		Sama_0949	0.20	+0.7
1,150,338	-		Sama_0949	0.20	-0.1
1,150,338	-		Sama_0949	0.20	+0.1
1,150,338	-		Sama_0949	0.20	-0.3
1,150,341	+		Sama_0949	0.21	-0.2
1,150,341	+		Sama_0949	0.21	+0.4
1,150,341	+		Sama_0949	0.21	-0.1
1,150,341	+		Sama_0949	0.21	-2.5
1,150,341	+		Sama_0949	0.21	+1.7
1,150,342	-		Sama_0949	0.21	-1.6
1,150,345	-		Sama_0949	0.22	-0.7
1,150,356	+		Sama_0949	0.24	-1.3
1,150,356	+		Sama_0949	0.24	+0.3
1,150,399	+		Sama_0949	0.32	-0.6
1,150,400	-		Sama_0949	0.32	+0.7
1,150,400	-		Sama_0949	0.32	+0.3
1,150,400	-		Sama_0949	0.32	+0.1
1,150,400	-		Sama_0949	0.32	-0.1
1,150,409	-		Sama_0949	0.33	-2.3
1,150,414	+		Sama_0949	0.34	-0.2
1,150,492	+		Sama_0949	0.49	-0.7
1,150,492	+		Sama_0949	0.49	-1.0
1,150,510	-		Sama_0949	0.52	-0.6
1,150,510	-		Sama_0949	0.52	-0.2
1,150,534	+		Sama_0949	0.56	-0.3
1,150,534	+		Sama_0949	0.56	+1.0
1,150,534	+		Sama_0949	0.56	+1.8
1,150,535	-		Sama_0949	0.56	+0.0
1,150,535	-		Sama_0949	0.56	-0.0
1,150,535	-		Sama_0949	0.56	+0.7
1,150,535	-		Sama_0949	0.56	-1.1
1,150,542	+		Sama_0949	0.58	-0.4
1,150,546	+		Sama_0949	0.58	+0.1
1,150,546	+		Sama_0949	0.58	+0.4
1,150,547	-		Sama_0949	0.59	-1.2
1,150,666	+		Sama_0949	0.80	+0.3
1,150,667	-		Sama_0949	0.81	-0.1
1,150,667	-		Sama_0949	0.81	+0.7
1,150,669	+		Sama_0949	0.81	-0.7
1,150,669	+		Sama_0949	0.81	-0.1
1,150,670	-		Sama_0949	0.81	-1.6
1,150,718	+				-1.7
1,150,718	+				+0.7
1,150,718	+				+0.3
1,150,718	+				+0.6
1,150,718	+				+0.3
1,150,719	-				-1.1
1,150,719	-				+0.7
1,150,738	+				-1.0
1,150,738	+				-0.6
1,150,739	-				-0.4
1,150,739	-				-1.2
1,150,750	+				-1.4
1,150,750	+				-1.3
1,150,751	-				-1.1
1,150,807	+				-0.1
1,150,807	+				-0.3
1,150,817	-				-0.3
1,150,844	+		Sama_0950	0.12	-0.8
1,150,844	+		Sama_0950	0.12	-0.4
1,150,844	+		Sama_0950	0.12	-1.3
1,150,844	+		Sama_0950	0.12	-0.3
1,150,844	+		Sama_0950	0.12	+0.3
1,150,844	+		Sama_0950	0.12	-1.1
1,150,844	+		Sama_0950	0.12	-1.7
1,150,845	-		Sama_0950	0.12	+0.8
1,150,845	-		Sama_0950	0.12	-1.4
1,150,845	-		Sama_0950	0.12	-2.1
1,150,845	-		Sama_0950	0.12	-0.6
1,150,845	-		Sama_0950	0.12	-0.6
1,150,845	-		Sama_0950	0.12	-0.1
1,150,845	-		Sama_0950	0.12	-0.1
1,150,855	+		Sama_0950	0.14	-1.0
1,150,904	+		Sama_0950	0.23	+0.4
1,150,983	+		Sama_0950	0.36	-0.5
1,150,983	+		Sama_0950	0.36	+1.3
1,150,983	+		Sama_0950	0.36	-0.4
1,150,983	+		Sama_0950	0.36	-0.7
1,150,984	-		Sama_0950	0.36	-0.9
1,150,984	-		Sama_0950	0.36	-0.4
1,150,995	+		Sama_0950	0.38	-0.4
1,150,996	-		Sama_0950	0.39	-0.5
1,150,996	-		Sama_0950	0.39	-0.8
1,151,036	-		Sama_0950	0.46	-0.3
1,151,036	-		Sama_0950	0.46	-0.7
1,151,036	-		Sama_0950	0.46	-0.7
1,151,036	-		Sama_0950	0.46	+0.3
1,151,059	+		Sama_0950	0.50	-1.5
1,151,060	-		Sama_0950	0.50	+0.4
1,151,071	+		Sama_0950	0.52	+0.9
1,151,071	+		Sama_0950	0.52	+0.3
1,151,072	-		Sama_0950	0.52	+0.1
1,151,075	+		Sama_0950	0.52	+0.4
1,151,075	+		Sama_0950	0.52	-0.7
1,151,075	+		Sama_0950	0.52	-0.7
1,151,076	-		Sama_0950	0.53	-2.3
1,151,076	-		Sama_0950	0.53	+1.3
1,151,076	-		Sama_0950	0.53	+0.4
1,151,098	+		Sama_0950	0.56	-0.8
1,151,099	-		Sama_0950	0.57	-1.5
1,151,099	-		Sama_0950	0.57	+0.3
1,151,144	-		Sama_0950	0.64	+0.8
1,151,144	-		Sama_0950	0.64	-0.6
1,151,150	-		Sama_0950	0.65	-1.7
1,151,150	-		Sama_0950	0.65	-1.4
1,151,176	-		Sama_0950	0.70	+0.4
1,151,181	+		Sama_0950	0.71	-2.0
1,151,181	+		Sama_0950	0.71	-0.6
1,151,181	+		Sama_0950	0.71	+0.3
1,151,181	+		Sama_0950	0.71	-0.2
1,151,181	+		Sama_0950	0.71	-1.2
1,151,181	+		Sama_0950	0.71	+0.7
1,151,181	+		Sama_0950	0.71	-0.1
1,151,181	+		Sama_0950	0.71	+0.1
1,151,181	+		Sama_0950	0.71	-0.8
1,151,182	-		Sama_0950	0.71	+0.7
1,151,182	-		Sama_0950	0.71	-0.6
1,151,182	-		Sama_0950	0.71	-1.3
1,151,182	-		Sama_0950	0.71	-0.4
1,151,248	+		Sama_0950	0.83	-0.9
1,151,270	+		Sama_0950	0.86	+0.4
1,151,271	-		Sama_0950	0.87	-3.0
1,151,271	-		Sama_0950	0.87	-0.9
1,151,271	-		Sama_0950	0.87	-0.6
1,151,282	+		Sama_0950	0.88	-0.7
1,151,282	+		Sama_0950	0.88	-0.4
1,151,282	+		Sama_0950	0.88	-0.6
1,151,283	-		Sama_0950	0.89	-2.1
1,151,283	-		Sama_0950	0.89	+0.8
1,151,302	+				+0.1
1,151,326	-				-0.1
1,151,353	+				-0.4
1,151,353	+				-0.1
1,151,355	+				+0.3
1,151,355	+				-0.7
1,151,355	+				-0.9
1,151,355	+				-0.4
1,151,355	+				-0.7
1,151,355	+				-0.9
1,151,355	+				-0.4
1,151,355	+				-0.4
1,151,355	+				-0.6
1,151,356	-				-1.1
1,151,356	-				-1.4
1,151,356	-				-0.8
1,151,356	-				+0.3
1,151,356	-				-1.2
1,151,356	-				+1.7
1,151,356	-				-0.3
1,151,356	-				+0.4
1,151,356	-				-0.5
1,151,356	-				-0.6
1,151,356	-				-0.6
1,151,356	-				-0.7
1,151,356	-				+2.0
1,151,356	-				+0.9
1,151,356	-				-2.3
1,151,356	-				-1.7
1,151,364	+				-0.9
1,151,365	-				-1.4
1,151,365	-				-0.2
1,151,365	-				+0.6
1,151,429	-				-1.1
1,151,433	+				-0.3
1,151,433	+				+1.8
1,151,434	-				+1.2
1,151,468	+				-0.7
1,151,469	-				+0.2
1,151,469	-				+0.2
1,151,498	+				+0.2
1,151,517	-				-0.9
1,151,522	+				-1.2
1,151,523	-				+0.2
1,151,523	-				-0.3
1,151,658	+		Sama_0951	0.30	-1.8
1,151,658	+		Sama_0951	0.30	-0.8
1,151,708	+		Sama_0951	0.40	-1.1
1,151,774	+		Sama_0951	0.54	-0.9
1,151,774	+		Sama_0951	0.54	-0.1
1,151,774	+		Sama_0951	0.54	+0.8
1,151,774	+		Sama_0951	0.54	-0.3
1,151,775	-		Sama_0951	0.54	-0.3
1,151,775	-		Sama_0951	0.54	-1.1
1,151,795	+		Sama_0951	0.58	-0.1
1,151,829	+		Sama_0951	0.65	-0.1
1,151,933	+		Sama_0951	0.87	-1.2
1,151,933	+		Sama_0951	0.87	-0.8
1,151,933	+		Sama_0951	0.87	-1.0
1,151,964	+				-0.6
1,151,965	-				-0.2
1,151,965	-				-0.2
1,151,985	+				+0.2
1,151,985	+				-1.2
1,151,985	+				+0.9
1,151,985	+				-1.1
1,151,985	+				-0.9
1,151,985	+				-1.5
1,151,986	-				+0.7
1,151,986	-				-0.6
1,151,986	-				-0.6
1,151,986	-				-0.6
1,151,986	-				-0.1
1,152,031	+				-1.6
1,152,055	+				-1.1
1,152,056	-				-0.6
1,152,076	+				-1.1
1,152,077	-				-1.2
1,152,121	+		Sama_0952	0.15	-0.3
1,152,133	-		Sama_0952	0.19	+0.8
1,152,133	-		Sama_0952	0.19	-1.2
1,152,174	+		Sama_0952	0.33	-0.3
1,152,174	+		Sama_0952	0.33	-0.9
1,152,175	-		Sama_0952	0.33	-0.1
1,152,175	-		Sama_0952	0.33	-0.1
1,152,175	-		Sama_0952	0.33	+0.9
1,152,175	-		Sama_0952	0.33	+1.2
1,152,175	-		Sama_0952	0.33	-1.1
1,152,236	+		Sama_0952	0.54	-1.1
1,152,236	+		Sama_0952	0.54	+0.1
1,152,236	+		Sama_0952	0.54	+0.0
1,152,237	-		Sama_0952	0.54	-2.6
1,152,237	-		Sama_0952	0.54	-1.3
1,152,237	-		Sama_0952	0.54	-0.3
1,152,237	-		Sama_0952	0.54	+0.4
1,152,237	-		Sama_0952	0.54	-0.1
1,152,277	-		Sama_0952	0.67	-1.2
1,152,277	-		Sama_0952	0.67	-0.0
1,152,277	-		Sama_0952	0.67	-0.9
1,152,321	+		Sama_0952	0.82	-0.3
1,152,322	-		Sama_0952	0.82	+0.7
1,152,322	-		Sama_0952	0.82	+0.2