Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_768 and HP15_769 are separated by 3 nucleotides HP15_769 and HP15_770 are separated by 158 nucleotides HP15_770 and HP15_771 are separated by 110 nucleotides
HP15_768: HP15_768 - lysyl-tRNA synthetase, at 778,716 to 780,251
_768
HP15_769: HP15_769 - uracil-DNA glycosylase, at 780,255 to 780,989
_769
HP15_770: HP15_770 - signal transduction protein, at 781,148 to 781,981
_770
HP15_771: HP15_771 - glycine cleavage T-protein (aminomethyl transferase), at 782,092 to 783,087
_771
Position (kb) 781
782 Strain fitness (log2 ratio) -1
0
1
2 at 780.284 kb on + strand at 780.284 kb on + strand at 780.284 kb on + strand at 780.284 kb on + strand at 780.292 kb on - strand at 780.390 kb on + strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.398 kb on - strand, within HP15_769 at 780.413 kb on - strand, within HP15_769 at 780.423 kb on - strand, within HP15_769 at 780.438 kb on + strand, within HP15_769 at 780.438 kb on + strand, within HP15_769 at 780.446 kb on - strand, within HP15_769 at 780.446 kb on - strand, within HP15_769 at 780.482 kb on - strand, within HP15_769 at 780.487 kb on + strand, within HP15_769 at 780.617 kb on + strand, within HP15_769 at 780.622 kb on + strand, within HP15_769 at 780.630 kb on - strand, within HP15_769 at 780.635 kb on - strand, within HP15_769 at 780.682 kb on + strand, within HP15_769 at 780.692 kb on + strand, within HP15_769 at 780.762 kb on - strand, within HP15_769 at 780.819 kb on + strand, within HP15_769 at 780.819 kb on - strand, within HP15_769 at 780.896 kb on + strand, within HP15_769 at 780.915 kb on - strand, within HP15_769 at 780.998 kb on - strand at 781.007 kb on + strand at 781.519 kb on - strand, within HP15_770 at 781.572 kb on + strand, within HP15_770 at 781.622 kb on + strand, within HP15_770 at 781.673 kb on + strand, within HP15_770 at 781.709 kb on + strand, within HP15_770 at 781.709 kb on + strand, within HP15_770 at 781.717 kb on - strand, within HP15_770 at 781.724 kb on - strand, within HP15_770 at 781.878 kb on + strand, within HP15_770 at 781.878 kb on + strand, within HP15_770 at 781.985 kb on + strand at 781.987 kb on + strand at 781.987 kb on + strand at 781.990 kb on - strand at 781.990 kb on - strand at 782.132 kb on + strand at 782.431 kb on + strand, within HP15_771 at 782.567 kb on - strand, within HP15_771 at 782.651 kb on + strand, within HP15_771 at 782.868 kb on - strand, within HP15_771
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. copper (II) chloride 1 mM remove 780,284 + -0.1 780,284 + -0.2 780,284 + +0.6 780,284 + -1.2 780,292 - +0.6 780,390 + HP15_769 0.18 +0.4 780,398 - HP15_769 0.19 -0.3 780,398 - HP15_769 0.19 +0.2 780,398 - HP15_769 0.19 -0.3 780,413 - HP15_769 0.21 -0.3 780,423 - HP15_769 0.23 +1.8 780,438 + HP15_769 0.25 +0.6 780,438 + HP15_769 0.25 -0.8 780,446 - HP15_769 0.26 +0.4 780,446 - HP15_769 0.26 -0.0 780,482 - HP15_769 0.31 +0.6 780,487 + HP15_769 0.32 -0.0 780,617 + HP15_769 0.49 +0.8 780,622 + HP15_769 0.50 -0.5 780,630 - HP15_769 0.51 +0.3 780,635 - HP15_769 0.52 +0.7 780,682 + HP15_769 0.58 -0.0 780,692 + HP15_769 0.59 +0.5 780,762 - HP15_769 0.69 -0.1 780,819 + HP15_769 0.77 -0.0 780,819 - HP15_769 0.77 -0.5 780,896 + HP15_769 0.87 -0.3 780,915 - HP15_769 0.90 -0.1 780,998 - -0.1 781,007 + +0.5 781,519 - HP15_770 0.44 +0.0 781,572 + HP15_770 0.51 +1.1 781,622 + HP15_770 0.57 -0.2 781,673 + HP15_770 0.63 -0.2 781,709 + HP15_770 0.67 +0.2 781,709 + HP15_770 0.67 +0.4 781,717 - HP15_770 0.68 -0.4 781,724 - HP15_770 0.69 +0.1 781,878 + HP15_770 0.88 -0.7 781,878 + HP15_770 0.88 +0.9 781,985 + +0.2 781,987 + +0.5 781,987 + -0.2 781,990 - -0.2 781,990 - +2.2 782,132 + +0.9 782,431 + HP15_771 0.34 -1.7 782,567 - HP15_771 0.48 -0.5 782,651 + HP15_771 0.56 -1.5 782,868 - HP15_771 0.78 -0.7
Or see this region's nucleotide sequence