Strain Fitness in Marinobacter adhaerens HP15 around HP15_3017
Experiment: m.b. copper (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. copper (II) chloride 1 mM |
---|---|---|---|---|---|
remove | |||||
3,161,511 | - | +2.4 | |||
3,161,753 | - | +0.1 | |||
3,161,797 | - | +1.1 | |||
3,161,899 | + | -1.0 | |||
3,161,982 | + | -0.0 | |||
3,162,086 | - | -1.0 | |||
3,162,236 | - | -0.3 | |||
3,162,236 | - | -0.4 | |||
3,162,247 | + | +3.0 | |||
3,162,416 | - | -0.4 | |||
3,162,565 | + | HP15_3017 | 0.15 | +1.0 | |
3,162,586 | + | HP15_3017 | 0.20 | -0.7 | |
3,162,594 | - | HP15_3017 | 0.22 | +0.2 | |
3,162,635 | - | HP15_3017 | 0.31 | +0.7 | |
3,162,673 | + | HP15_3017 | 0.40 | +0.5 | |
3,162,673 | + | HP15_3017 | 0.40 | -0.7 | |
3,162,673 | + | HP15_3017 | 0.40 | +0.9 | |
3,162,673 | + | HP15_3017 | 0.40 | +1.0 | |
3,162,681 | - | HP15_3017 | 0.42 | +0.6 | |
3,162,759 | - | HP15_3017 | 0.60 | +0.2 | |
3,162,903 | + | -0.7 | |||
3,163,055 | - | -0.5 | |||
3,163,423 | + | +0.9 | |||
3,163,506 | + | -0.7 | |||
3,163,587 | - | -0.7 | |||
3,163,713 | - | -0.1 | |||
3,163,805 | - | HP15_3019 | 0.16 | +0.3 | |
3,163,835 | - | HP15_3019 | 0.19 | -1.2 | |
3,163,865 | + | HP15_3019 | 0.22 | +0.9 | |
3,163,878 | - | HP15_3019 | 0.23 | +0.7 |
Or see this region's nucleotide sequence