Experiment: m.b. Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PGA1_c09590 and PGA1_c09600 are separated by 75 nucleotides PGA1_c09600 and PGA1_c09610 are separated by 19 nucleotides
PGA1_c09590: PGA1_c09590 - uncharacterized protein YhiN, at 983,252 to 984,433
_c09590
PGA1_c09600: PGA1_c09600 - cell division protein ftsW, at 984,509 to 985,777
_c09600
PGA1_c09610: PGA1_c09610 - UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase MurG, at 985,797 to 986,894
_c09610
Position (kb) 984
985
986 Strain fitness (log2 ratio) -2
-1
0
1
2 at 983.519 kb on + strand, within PGA1_c09590 at 983.538 kb on + strand, within PGA1_c09590 at 983.539 kb on + strand, within PGA1_c09590 at 983.672 kb on + strand, within PGA1_c09590 at 983.687 kb on + strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.695 kb on - strand, within PGA1_c09590 at 983.741 kb on - strand, within PGA1_c09590 at 983.743 kb on + strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.798 kb on - strand, within PGA1_c09590 at 983.809 kb on + strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.817 kb on - strand, within PGA1_c09590 at 983.876 kb on - strand, within PGA1_c09590 at 983.916 kb on - strand, within PGA1_c09590 at 983.936 kb on - strand, within PGA1_c09590 at 983.982 kb on + strand, within PGA1_c09590 at 984.036 kb on - strand, within PGA1_c09590 at 984.050 kb on + strand, within PGA1_c09590 at 984.073 kb on + strand, within PGA1_c09590 at 984.138 kb on + strand, within PGA1_c09590 at 984.381 kb on + strand at 984.386 kb on + strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.394 kb on - strand at 984.412 kb on + strand at 984.413 kb on + strand at 984.413 kb on + strand at 984.420 kb on - strand at 984.421 kb on - strand at 984.477 kb on - strand at 985.701 kb on - strand at 985.701 kb on - strand at 985.729 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand at 985.739 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Benzalkonium Chloride 0.002 mg/ml remove 983,519 + PGA1_c09590 0.23 -1.0 983,538 + PGA1_c09590 0.24 -1.6 983,539 + PGA1_c09590 0.24 -1.4 983,672 + PGA1_c09590 0.36 -0.7 983,687 + PGA1_c09590 0.37 +0.9 983,695 - PGA1_c09590 0.37 +0.6 983,695 - PGA1_c09590 0.37 -1.4 983,741 - PGA1_c09590 0.41 +0.7 983,743 + PGA1_c09590 0.42 -0.7 983,798 - PGA1_c09590 0.46 -2.6 983,798 - PGA1_c09590 0.46 -2.1 983,809 + PGA1_c09590 0.47 -0.4 983,817 - PGA1_c09590 0.48 +0.7 983,817 - PGA1_c09590 0.48 -1.7 983,876 - PGA1_c09590 0.53 -0.9 983,916 - PGA1_c09590 0.56 -0.6 983,936 - PGA1_c09590 0.58 -1.4 983,982 + PGA1_c09590 0.62 -1.6 984,036 - PGA1_c09590 0.66 -2.6 984,050 + PGA1_c09590 0.68 +1.7 984,073 + PGA1_c09590 0.69 +2.2 984,138 + PGA1_c09590 0.75 +0.7 984,381 + -2.0 984,386 + -0.6 984,394 - +2.7 984,394 - +0.8 984,394 - +1.6 984,412 + +2.3 984,413 + -0.1 984,413 + -0.6 984,420 - -0.3 984,421 - +1.0 984,477 - -1.0 985,701 - -0.1 985,701 - +0.0 985,729 + +1.3 985,739 + -0.2 985,739 + -0.4 985,739 + -0.6 985,739 + -0.8
Or see this region's nucleotide sequence