Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c06480
Experiment: m.b. Benzalkonium Chloride 0.002 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. Benzalkonium Chloride 0.002 mg/ml |
---|---|---|---|---|---|
remove | |||||
663,191 | + | -0.4 | |||
663,227 | + | +0.8 | |||
663,302 | - | PGA1_c06480 | 0.13 | +0.7 | |
663,698 | + | PGA1_c06480 | 0.88 | +1.1 | |
663,698 | + | PGA1_c06480 | 0.88 | +1.9 | |
663,729 | + | +2.2 | |||
663,757 | - | -1.2 | |||
663,771 | + | +1.8 | |||
663,801 | - | +0.6 | |||
663,834 | - | -0.1 | |||
663,861 | + | -1.4 | |||
663,861 | + | +0.3 | |||
663,861 | + | -1.1 | |||
663,861 | + | -0.5 | |||
663,869 | - | -1.2 | |||
663,896 | + | +0.1 | |||
663,896 | + | -0.4 | |||
663,904 | - | -1.1 | |||
663,904 | - | +1.0 | |||
663,904 | - | -0.6 | |||
663,904 | - | -1.4 | |||
663,904 | - | -0.8 | |||
663,966 | - | +1.4 | |||
663,978 | + | -1.1 | |||
663,978 | + | +0.1 | |||
664,046 | + | PGA1_c06490 | 0.13 | +0.3 | |
664,054 | + | PGA1_c06490 | 0.14 | +0.4 | |
664,062 | - | PGA1_c06490 | 0.15 | +0.2 | |
664,285 | - | PGA1_c06490 | 0.33 | -2.4 | |
664,303 | - | PGA1_c06490 | 0.35 | +1.2 | |
664,350 | + | PGA1_c06490 | 0.38 | -0.7 | |
664,390 | + | PGA1_c06490 | 0.42 | -0.0 | |
664,557 | - | PGA1_c06490 | 0.56 | +0.6 | |
664,605 | - | PGA1_c06490 | 0.60 | -1.2 | |
664,605 | - | PGA1_c06490 | 0.60 | -0.2 | |
664,725 | - | PGA1_c06490 | 0.69 | -0.5 |
Or see this region's nucleotide sequence