Experiment: m.b. Cobalt chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3242 and HP15_3243 are separated by 9 nucleotides HP15_3243 and HP15_3244 are separated by 116 nucleotides HP15_3244 and HP15_3245 are separated by 9 nucleotides
HP15_3242: HP15_3242 - ferric uptake regulator, CjrA, predicted, at 3,396,473 to 3,397,483
_3242
HP15_3243: HP15_3243 - appr-1-p processing domain protein, at 3,397,493 to 3,398,026
_3243
HP15_3244: HP15_3244 - uncharacterized conserved protein UCP029033, periplasmic protein, at 3,398,143 to 3,398,853
_3244
HP15_3245: HP15_3245 - hyaluronidase, at 3,398,863 to 3,399,987
_3245
Position (kb)
3398
3399 Strain fitness (log2 ratio)
-1
0
1
2 at 3397.219 kb on + strand, within HP15_3242 at 3397.227 kb on - strand, within HP15_3242 at 3397.318 kb on + strand, within HP15_3242 at 3397.318 kb on - strand, within HP15_3242 at 3397.346 kb on + strand, within HP15_3242 at 3397.349 kb on - strand, within HP15_3242 at 3397.363 kb on + strand, within HP15_3242 at 3397.391 kb on - strand at 3397.520 kb on + strand at 3397.540 kb on - strand at 3397.638 kb on + strand, within HP15_3243 at 3397.655 kb on + strand, within HP15_3243 at 3397.721 kb on - strand, within HP15_3243 at 3397.829 kb on + strand, within HP15_3243 at 3397.837 kb on - strand, within HP15_3243 at 3397.837 kb on - strand, within HP15_3243 at 3397.843 kb on + strand, within HP15_3243 at 3398.075 kb on + strand at 3398.076 kb on - strand at 3398.199 kb on + strand at 3398.212 kb on - strand at 3398.217 kb on - strand, within HP15_3244 at 3398.262 kb on - strand, within HP15_3244 at 3398.312 kb on + strand, within HP15_3244 at 3398.335 kb on + strand, within HP15_3244 at 3398.392 kb on - strand, within HP15_3244 at 3398.445 kb on + strand, within HP15_3244 at 3398.450 kb on + strand, within HP15_3244 at 3398.475 kb on + strand, within HP15_3244 at 3398.521 kb on - strand, within HP15_3244 at 3398.521 kb on - strand, within HP15_3244 at 3398.542 kb on + strand, within HP15_3244 at 3398.555 kb on - strand, within HP15_3244 at 3398.576 kb on - strand, within HP15_3244 at 3398.590 kb on + strand, within HP15_3244 at 3398.661 kb on + strand, within HP15_3244 at 3398.676 kb on - strand, within HP15_3244 at 3398.791 kb on - strand at 3399.124 kb on - strand, within HP15_3245
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.64 mM remove 3,397,219 + HP15_3242 0.74 +2.0 3,397,227 - HP15_3242 0.75 +0.1 3,397,318 + HP15_3242 0.84 +0.4 3,397,318 - HP15_3242 0.84 +1.2 3,397,346 + HP15_3242 0.86 +0.2 3,397,349 - HP15_3242 0.87 +0.2 3,397,363 + HP15_3242 0.88 +0.8 3,397,391 - -0.1 3,397,520 + -0.6 3,397,540 - +1.0 3,397,638 + HP15_3243 0.27 +0.0 3,397,655 + HP15_3243 0.30 -0.5 3,397,721 - HP15_3243 0.43 +0.5 3,397,829 + HP15_3243 0.63 -0.5 3,397,837 - HP15_3243 0.64 -1.1 3,397,837 - HP15_3243 0.64 -1.0 3,397,843 + HP15_3243 0.66 +0.2 3,398,075 + -1.5 3,398,076 - +0.5 3,398,199 + +0.2 3,398,212 - -1.2 3,398,217 - HP15_3244 0.10 -1.3 3,398,262 - HP15_3244 0.17 -0.5 3,398,312 + HP15_3244 0.24 -0.5 3,398,335 + HP15_3244 0.27 -0.3 3,398,392 - HP15_3244 0.35 -0.8 3,398,445 + HP15_3244 0.42 -0.4 3,398,450 + HP15_3244 0.43 -0.1 3,398,475 + HP15_3244 0.47 -0.2 3,398,521 - HP15_3244 0.53 -1.4 3,398,521 - HP15_3244 0.53 -1.3 3,398,542 + HP15_3244 0.56 -0.4 3,398,555 - HP15_3244 0.58 +0.2 3,398,576 - HP15_3244 0.61 -0.2 3,398,590 + HP15_3244 0.63 +0.2 3,398,661 + HP15_3244 0.73 -0.3 3,398,676 - HP15_3244 0.75 -0.4 3,398,791 - -0.2 3,399,124 - HP15_3245 0.23 +1.0
Or see this region's nucleotide sequence