Experiment: m.b. Cobalt chloride 0.64 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2849 and HP15_2850 are separated by 27 nucleotides HP15_2850 and HP15_2851 are separated by 73 nucleotides HP15_2851 and HP15_2852 are separated by 284 nucleotides
HP15_2849: HP15_2849 - SEC-C motif domain protein, at 2,989,084 to 2,989,428
_2849
HP15_2850: HP15_2850 - conserved hypothetical protein, at 2,989,456 to 2,989,890
_2850
HP15_2851: HP15_2851 - transmembrane transport protein, at 2,989,964 to 2,991,103
_2851
HP15_2852: HP15_2852 - glucosylglycerol-phosphate synthase, at 2,991,388 to 2,993,661
_2852
Position (kb)
2989
2990
2991
2992 Strain fitness (log2 ratio)
-2
-1
0
1 at 2988.999 kb on - strand at 2989.029 kb on + strand at 2989.116 kb on + strand at 2989.131 kb on - strand, within HP15_2849 at 2989.139 kb on - strand, within HP15_2849 at 2989.160 kb on + strand, within HP15_2849 at 2989.211 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.253 kb on + strand, within HP15_2849 at 2989.261 kb on - strand, within HP15_2849 at 2989.261 kb on - strand, within HP15_2849 at 2989.282 kb on - strand, within HP15_2849 at 2989.322 kb on + strand, within HP15_2849 at 2989.322 kb on + strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.330 kb on - strand, within HP15_2849 at 2989.335 kb on - strand, within HP15_2849 at 2989.469 kb on + strand at 2989.469 kb on + strand at 2989.497 kb on + strand at 2989.535 kb on - strand, within HP15_2850 at 2989.588 kb on - strand, within HP15_2850 at 2989.756 kb on + strand, within HP15_2850 at 2989.763 kb on + strand, within HP15_2850 at 2989.764 kb on - strand, within HP15_2850 at 2989.881 kb on - strand at 2989.883 kb on + strand at 2989.899 kb on - strand at 2990.076 kb on - strand at 2990.112 kb on + strand, within HP15_2851 at 2990.118 kb on - strand, within HP15_2851 at 2990.170 kb on - strand, within HP15_2851 at 2990.170 kb on - strand, within HP15_2851 at 2990.178 kb on + strand, within HP15_2851 at 2990.188 kb on + strand, within HP15_2851 at 2990.215 kb on + strand, within HP15_2851 at 2990.330 kb on - strand, within HP15_2851 at 2990.401 kb on - strand, within HP15_2851 at 2990.403 kb on - strand, within HP15_2851 at 2990.426 kb on - strand, within HP15_2851 at 2990.473 kb on + strand, within HP15_2851 at 2990.481 kb on - strand, within HP15_2851 at 2990.482 kb on + strand, within HP15_2851 at 2990.540 kb on - strand, within HP15_2851 at 2990.621 kb on + strand, within HP15_2851 at 2990.654 kb on + strand, within HP15_2851 at 2990.716 kb on + strand, within HP15_2851 at 2990.724 kb on - strand, within HP15_2851 at 2990.729 kb on - strand, within HP15_2851 at 2990.757 kb on + strand, within HP15_2851 at 2990.786 kb on - strand, within HP15_2851 at 2990.850 kb on + strand, within HP15_2851 at 2990.862 kb on - strand, within HP15_2851 at 2990.910 kb on + strand, within HP15_2851 at 2990.910 kb on + strand, within HP15_2851 at 2990.910 kb on - strand, within HP15_2851 at 2990.918 kb on - strand, within HP15_2851 at 2990.918 kb on - strand, within HP15_2851 at 2990.920 kb on - strand, within HP15_2851 at 2990.938 kb on + strand, within HP15_2851 at 2990.963 kb on + strand, within HP15_2851 at 2990.963 kb on + strand, within HP15_2851 at 2990.971 kb on - strand, within HP15_2851 at 2990.971 kb on - strand, within HP15_2851 at 2991.052 kb on + strand at 2991.055 kb on - strand at 2991.145 kb on - strand at 2991.288 kb on - strand at 2991.316 kb on + strand at 2991.316 kb on + strand at 2991.444 kb on + strand at 2991.492 kb on + strand at 2991.579 kb on + strand at 2991.605 kb on - strand at 2991.648 kb on - strand, within HP15_2852 at 2991.694 kb on - strand, within HP15_2852 at 2991.792 kb on + strand, within HP15_2852 at 2991.792 kb on + strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.800 kb on - strand, within HP15_2852 at 2991.802 kb on - strand, within HP15_2852 at 2991.837 kb on + strand, within HP15_2852 at 2991.885 kb on + strand, within HP15_2852 at 2991.957 kb on + strand, within HP15_2852 at 2991.972 kb on - strand, within HP15_2852 at 2992.024 kb on - strand, within HP15_2852 at 2992.066 kb on - strand, within HP15_2852
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.64 mM remove 2,988,999 - -0.4 2,989,029 + +0.2 2,989,116 + -0.2 2,989,131 - HP15_2849 0.14 -0.4 2,989,139 - HP15_2849 0.16 +0.2 2,989,160 + HP15_2849 0.22 +0.1 2,989,211 + HP15_2849 0.37 -0.0 2,989,253 + HP15_2849 0.49 +0.2 2,989,253 + HP15_2849 0.49 -0.4 2,989,253 + HP15_2849 0.49 +0.1 2,989,261 - HP15_2849 0.51 +1.1 2,989,261 - HP15_2849 0.51 +0.6 2,989,282 - HP15_2849 0.57 +0.8 2,989,322 + HP15_2849 0.69 +0.9 2,989,322 + HP15_2849 0.69 -0.3 2,989,330 - HP15_2849 0.71 +1.6 2,989,330 - HP15_2849 0.71 -1.1 2,989,330 - HP15_2849 0.71 -1.4 2,989,335 - HP15_2849 0.73 -0.0 2,989,469 + +0.3 2,989,469 + -1.2 2,989,497 + +0.5 2,989,535 - HP15_2850 0.18 -0.1 2,989,588 - HP15_2850 0.30 +0.7 2,989,756 + HP15_2850 0.69 +0.7 2,989,763 + HP15_2850 0.71 -1.2 2,989,764 - HP15_2850 0.71 -1.1 2,989,881 - +1.4 2,989,883 + +0.9 2,989,899 - +0.1 2,990,076 - -0.1 2,990,112 + HP15_2851 0.13 +0.3 2,990,118 - HP15_2851 0.14 -0.8 2,990,170 - HP15_2851 0.18 +0.2 2,990,170 - HP15_2851 0.18 -0.4 2,990,178 + HP15_2851 0.19 -1.3 2,990,188 + HP15_2851 0.20 +0.5 2,990,215 + HP15_2851 0.22 -0.9 2,990,330 - HP15_2851 0.32 -1.1 2,990,401 - HP15_2851 0.38 -0.2 2,990,403 - HP15_2851 0.39 +0.4 2,990,426 - HP15_2851 0.41 -0.2 2,990,473 + HP15_2851 0.45 +0.9 2,990,481 - HP15_2851 0.45 +0.1 2,990,482 + HP15_2851 0.45 -0.1 2,990,540 - HP15_2851 0.51 -0.7 2,990,621 + HP15_2851 0.58 -0.0 2,990,654 + HP15_2851 0.61 -0.3 2,990,716 + HP15_2851 0.66 -1.0 2,990,724 - HP15_2851 0.67 +1.2 2,990,729 - HP15_2851 0.67 -0.1 2,990,757 + HP15_2851 0.70 -0.2 2,990,786 - HP15_2851 0.72 -0.1 2,990,850 + HP15_2851 0.78 -0.1 2,990,862 - HP15_2851 0.79 +0.5 2,990,910 + HP15_2851 0.83 -0.3 2,990,910 + HP15_2851 0.83 +0.2 2,990,910 - HP15_2851 0.83 -0.8 2,990,918 - HP15_2851 0.84 -1.8 2,990,918 - HP15_2851 0.84 -0.4 2,990,920 - HP15_2851 0.84 -0.3 2,990,938 + HP15_2851 0.85 +0.9 2,990,963 + HP15_2851 0.88 +0.8 2,990,963 + HP15_2851 0.88 +0.2 2,990,971 - HP15_2851 0.88 -0.5 2,990,971 - HP15_2851 0.88 -0.2 2,991,052 + -2.4 2,991,055 - +0.4 2,991,145 - +0.3 2,991,288 - -0.1 2,991,316 + +0.3 2,991,316 + +0.5 2,991,444 + -0.3 2,991,492 + -0.3 2,991,579 + -2.1 2,991,605 - +0.4 2,991,648 - HP15_2852 0.11 -0.1 2,991,694 - HP15_2852 0.13 -0.4 2,991,792 + HP15_2852 0.18 -0.3 2,991,792 + HP15_2852 0.18 -0.5 2,991,800 - HP15_2852 0.18 +0.0 2,991,800 - HP15_2852 0.18 -0.1 2,991,800 - HP15_2852 0.18 -0.1 2,991,800 - HP15_2852 0.18 -0.3 2,991,800 - HP15_2852 0.18 +0.4 2,991,800 - HP15_2852 0.18 -0.1 2,991,800 - HP15_2852 0.18 +0.5 2,991,802 - HP15_2852 0.18 -0.2 2,991,837 + HP15_2852 0.20 +0.2 2,991,885 + HP15_2852 0.22 +0.5 2,991,957 + HP15_2852 0.25 +0.1 2,991,972 - HP15_2852 0.26 +0.6 2,992,024 - HP15_2852 0.28 +0.7 2,992,066 - HP15_2852 0.30 +0.2
Or see this region's nucleotide sequence