Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20300

Experiment: m.b. Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.002 mg/ml
2,107,981	-		PGA1_c20290	0.38	+0.6
2,107,981	-		PGA1_c20290	0.38	-0.1
2,108,041	-		PGA1_c20290	0.43	-0.1
2,108,045	+		PGA1_c20290	0.43	-0.3
2,108,053	-		PGA1_c20290	0.43	-0.3
2,108,053	-		PGA1_c20290	0.43	-1.8
2,108,214	-		PGA1_c20290	0.56	-0.9
2,108,366	+		PGA1_c20290	0.67	-1.4
2,108,411	+		PGA1_c20290	0.71	-0.3
2,108,413	+		PGA1_c20290	0.71	-2.7
2,108,456	+		PGA1_c20290	0.74	-0.1
2,108,456	+		PGA1_c20290	0.74	-1.4
2,108,469	-		PGA1_c20290	0.75	-0.7
2,108,484	-		PGA1_c20290	0.76	-1.3
2,108,494	-		PGA1_c20290	0.77	+0.1
2,108,558	+		PGA1_c20290	0.82	+1.5
2,108,568	+		PGA1_c20290	0.83	+0.2
2,108,568	+		PGA1_c20290	0.83	-0.2
2,108,568	+		PGA1_c20290	0.83	-1.9
2,108,576	-		PGA1_c20290	0.83	+0.1
2,108,576	-		PGA1_c20290	0.83	-0.7
2,108,770	+				+0.3
2,108,790	+				-1.1
2,108,795	+				-0.5
2,108,795	+				+0.1
2,108,795	+				-1.8
2,108,834	-				-0.8
2,108,834	-				+0.7
2,108,934	-				-0.7
2,108,982	-				-0.7
2,109,007	+				+0.3
2,109,042	+				-2.4
2,109,159	+		PGA1_c20300	0.16	-2.7
2,109,244	-		PGA1_c20300	0.24	+0.7
2,109,321	-		PGA1_c20300	0.30	-0.3
2,109,396	+		PGA1_c20300	0.37	-0.1
2,109,408	-		PGA1_c20300	0.38	-3.0
2,109,468	-		PGA1_c20300	0.43	+0.2
2,109,482	-		PGA1_c20300	0.44	+0.9
2,109,550	+		PGA1_c20300	0.50	-0.5
2,109,550	+		PGA1_c20300	0.50	-0.2
2,109,552	-		PGA1_c20300	0.51	+0.8
2,109,602	-		PGA1_c20300	0.55	+0.4
2,109,635	-		PGA1_c20300	0.58	+0.9
2,109,651	-		PGA1_c20300	0.59	+1.6
2,109,651	-		PGA1_c20300	0.59	+1.6
2,109,750	-		PGA1_c20300	0.68	-0.4
2,109,757	-		PGA1_c20300	0.68	+0.3
2,109,793	-		PGA1_c20300	0.72	+1.0
2,109,793	-		PGA1_c20300	0.72	+2.0
2,109,864	-		PGA1_c20300	0.78	+0.4
2,109,866	+		PGA1_c20300	0.78	-0.4
2,109,875	-		PGA1_c20300	0.79	-0.2
2,109,881	+		PGA1_c20300	0.79	+0.5
2,109,889	-		PGA1_c20300	0.80	-1.1
2,109,889	-		PGA1_c20300	0.80	+0.8
2,109,889	-		PGA1_c20300	0.80	+0.0
2,109,889	-		PGA1_c20300	0.80	-0.4
2,109,914	+		PGA1_c20300	0.82	-0.6
2,109,922	-		PGA1_c20300	0.83	+0.9
2,109,932	+		PGA1_c20300	0.84	+0.9
2,109,932	-		PGA1_c20300	0.84	+0.9
2,109,935	-		PGA1_c20300	0.84	-0.4
2,109,935	-		PGA1_c20300	0.84	+0.9
2,109,937	+		PGA1_c20300	0.84	-1.3
2,109,945	-		PGA1_c20300	0.85	-0.1
2,109,959	+		PGA1_c20300	0.86	-1.1
2,109,964	+		PGA1_c20300	0.86	-1.1
2,109,998	+		PGA1_c20300	0.89	-0.4
2,110,022	-				+1.1
2,110,092	-				-1.9
2,110,094	+				-2.9
2,110,136	-				-3.4
2,110,145	+				-0.9
2,110,147	-				+0.3
2,110,182	+				-1.1
2,110,189	-				+0.3
2,110,201	+				+0.0
2,110,299	+		PGA1_c20310	0.13	+0.2
2,110,307	-		PGA1_c20310	0.14	-1.0
2,110,628	-		PGA1_c20310	0.37	+0.0
2,110,628	-		PGA1_c20310	0.37	-0.3
2,110,628	-		PGA1_c20310	0.37	-0.1
2,110,628	-		PGA1_c20310	0.37	-0.7
2,110,635	+		PGA1_c20310	0.37	-1.6
2,110,648	+		PGA1_c20310	0.38	-1.0
2,110,711	-		PGA1_c20310	0.43	-1.9
2,110,715	-		PGA1_c20310	0.43	+1.1
2,110,770	-		PGA1_c20310	0.47	-0.3
2,110,784	+		PGA1_c20310	0.48	-0.9
2,110,852	+		PGA1_c20310	0.53	-2.3
2,110,870	-		PGA1_c20310	0.54	+0.9
2,110,919	+		PGA1_c20310	0.58	+0.9
2,110,942	-		PGA1_c20310	0.59	-1.5
2,110,967	+		PGA1_c20310	0.61	-1.3
2,110,976	+		PGA1_c20310	0.62	-2.9
2,111,021	+		PGA1_c20310	0.65	+0.0
2,111,034	-		PGA1_c20310	0.66	-0.1
2,111,062	-		PGA1_c20310	0.68	-0.9
2,111,070	+		PGA1_c20310	0.69	-0.1
2,111,078	-		PGA1_c20310	0.69	+0.3