Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c14980

Experiment: m.b. Benzalkonium Chloride 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Benzalkonium Chloride 0.002 mg/ml
1,556,222	+		PGA1_c14960	0.30	+0.3
1,556,233	+		PGA1_c14960	0.32	+1.7
1,556,249	-		PGA1_c14960	0.34	-2.1
1,556,320	-		PGA1_c14960	0.46	-0.4
1,556,341	-		PGA1_c14960	0.49	-1.5
1,556,351	-		PGA1_c14960	0.51	+0.6
1,556,355	+		PGA1_c14960	0.51	-0.1
1,556,357	-		PGA1_c14960	0.52	-1.3
1,556,522	+		PGA1_c14960	0.78	-1.2
1,556,666	-				-0.1
1,556,704	+				+0.1
1,556,744	+				-2.4
1,556,753	+				+0.7
1,556,761	+				-0.4
1,556,761	+				-1.0
1,556,761	+				+0.0
1,556,761	+				+0.7
1,556,761	+				-1.9
1,556,769	-				-1.1
1,556,769	-				-1.4
1,556,769	-				+0.4
1,556,769	-				+0.8
1,556,769	-				+0.0
1,556,804	+				+0.5
1,556,804	+				-0.1
1,556,804	+				+0.3
1,556,809	+				+1.3
1,556,812	-				+0.5
1,556,812	-				-1.4
1,556,812	-				-1.7
1,556,851	+		PGA1_c14970	0.17	+0.9
1,556,859	-		PGA1_c14970	0.21	-0.6
1,556,859	-		PGA1_c14970	0.21	+0.4
1,557,037	+				+1.2
1,557,037	+				-1.1
1,557,037	+				-0.4
1,557,043	+				-0.6
1,557,045	-				-1.0
1,557,045	-				-1.4
1,557,164	+				+0.3
1,557,172	-				-0.8
1,557,172	-				-0.7
1,557,172	-				-1.4
1,557,219	+				-1.4
1,557,235	-				-0.5
1,557,255	+		PGA1_c14980	0.12	+1.5
1,557,258	-		PGA1_c14980	0.12	-0.8
1,557,263	-		PGA1_c14980	0.13	-3.3
1,557,266	+		PGA1_c14980	0.13	-1.1
1,557,274	-		PGA1_c14980	0.15	-1.6
1,557,274	-		PGA1_c14980	0.15	-0.2
1,557,274	-		PGA1_c14980	0.15	-1.5
1,557,274	-		PGA1_c14980	0.15	-0.4
1,557,353	-		PGA1_c14980	0.27	+0.8
1,557,387	-		PGA1_c14980	0.32	-0.1
1,557,387	-		PGA1_c14980	0.32	-0.9
1,557,395	+		PGA1_c14980	0.33	+1.1
1,557,395	+		PGA1_c14980	0.33	-1.1
1,557,480	+		PGA1_c14980	0.46	-1.1
1,557,489	-		PGA1_c14980	0.47	-3.6
1,557,569	+		PGA1_c14980	0.60	-0.2
1,557,569	+		PGA1_c14980	0.60	+0.0
1,557,577	-		PGA1_c14980	0.61	-0.3
1,557,598	-		PGA1_c14980	0.64	-3.2
1,557,619	+		PGA1_c14980	0.67	+0.6
1,557,637	+		PGA1_c14980	0.70	-2.1
1,557,776	+				+0.6
1,557,794	-				+1.9
1,557,807	-				+0.3
1,557,829	+				-0.7
1,557,885	-		PGA1_c14990	0.11	+0.9
1,557,932	+		PGA1_c14990	0.21	+0.7
1,557,940	-		PGA1_c14990	0.23	-0.8
1,557,941	-		PGA1_c14990	0.23	-0.9
1,557,941	-		PGA1_c14990	0.23	-0.4
1,558,021	-		PGA1_c14990	0.40	-0.1
1,558,038	+		PGA1_c14990	0.43	-0.5
1,558,038	+		PGA1_c14990	0.43	-1.6
1,558,042	-		PGA1_c14990	0.44	+0.7
1,558,046	-		PGA1_c14990	0.45	+0.0
1,558,080	+		PGA1_c14990	0.52	-0.3
1,558,088	-		PGA1_c14990	0.54	-2.4
1,558,088	-		PGA1_c14990	0.54	-1.1
1,558,088	-		PGA1_c14990	0.54	+0.2
1,558,088	-		PGA1_c14990	0.54	+0.8
1,558,088	-		PGA1_c14990	0.54	+0.3
1,558,117	+		PGA1_c14990	0.60	+0.9
1,558,196	+		PGA1_c14990	0.77	+1.1
1,558,216	+		PGA1_c14990	0.81	+0.2
1,558,216	+		PGA1_c14990	0.81	+1.4
1,558,224	-		PGA1_c14990	0.82	-0.4
1,558,224	-		PGA1_c14990	0.82	+0.3
1,558,231	+		PGA1_c14990	0.84	+0.2
1,558,250	-		PGA1_c14990	0.88	+0.2
1,558,250	-		PGA1_c14990	0.88	-0.9
1,558,262	+				+0.4
1,558,262	+				+0.3
1,558,271	+				-2.6
1,558,276	+				+0.3
1,558,339	+				+1.5
1,558,438	+		PGA1_c15000	0.13	-0.4
1,558,438	+		PGA1_c15000	0.13	+0.2
1,558,496	-		PGA1_c15000	0.20	-0.8
1,558,497	+		PGA1_c15000	0.20	-0.3
1,558,505	-		PGA1_c15000	0.21	-2.3
1,558,521	+		PGA1_c15000	0.23	-0.4
1,558,521	+		PGA1_c15000	0.23	-0.3
1,558,521	+		PGA1_c15000	0.23	-0.3
1,558,521	+		PGA1_c15000	0.23	+0.9
1,558,529	-		PGA1_c15000	0.24	-0.3
1,558,529	-		PGA1_c15000	0.24	+1.1
1,558,529	-		PGA1_c15000	0.24	-1.5
1,558,529	-		PGA1_c15000	0.24	+1.6
1,558,529	-		PGA1_c15000	0.24	+0.6
1,558,529	-		PGA1_c15000	0.24	-0.2
1,558,529	-		PGA1_c15000	0.24	+0.8
1,558,539	-		PGA1_c15000	0.25	+1.8
1,558,591	-		PGA1_c15000	0.32	+0.6
1,558,609	-		PGA1_c15000	0.34	+0.9
1,558,649	+		PGA1_c15000	0.38	-1.4
1,558,701	+		PGA1_c15000	0.45	-1.1
1,558,828	-		PGA1_c15000	0.60	-0.5