Strain Fitness in Marinobacter adhaerens HP15 around HP15_3863

Experiment: m.b. Cobalt chloride 0.32 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3862 and HP15_3863 are separated by 159 nucleotidesHP15_3863 and HP15_3864 are separated by 79 nucleotides HP15_3862: HP15_3862 - pyridoxamine 5'-phosphate oxidase, at 4,087,101 to 4,087,811 _3862 HP15_3863: HP15_3863 - GGDEF domain protein, at 4,087,971 to 4,089,257 _3863 HP15_3864: HP15_3864 - secreted protein containing DUF748, at 4,089,337 to 4,092,162 _3864 Position (kb) 4087 4088 4089 4090Strain fitness (log2 ratio) -2 -1 0 1 2at 4087.752 kb on - strandat 4087.752 kb on - strandat 4087.766 kb on + strandat 4087.886 kb on + strandat 4087.976 kb on - strandat 4087.981 kb on + strandat 4087.999 kb on - strandat 4088.122 kb on + strand, within HP15_3863at 4088.130 kb on - strand, within HP15_3863at 4088.198 kb on - strand, within HP15_3863at 4088.225 kb on + strand, within HP15_3863at 4088.247 kb on - strand, within HP15_3863at 4088.247 kb on - strand, within HP15_3863at 4088.252 kb on - strand, within HP15_3863at 4088.285 kb on + strand, within HP15_3863at 4088.293 kb on + strand, within HP15_3863at 4088.301 kb on - strand, within HP15_3863at 4088.303 kb on + strand, within HP15_3863at 4088.325 kb on + strand, within HP15_3863at 4088.359 kb on + strand, within HP15_3863at 4088.428 kb on - strand, within HP15_3863at 4088.483 kb on + strand, within HP15_3863at 4088.487 kb on + strand, within HP15_3863at 4088.625 kb on - strand, within HP15_3863at 4088.918 kb on + strand, within HP15_3863at 4089.066 kb on - strand, within HP15_3863at 4089.066 kb on - strand, within HP15_3863at 4089.076 kb on - strand, within HP15_3863at 4089.149 kb on + strandat 4089.273 kb on - strandat 4089.346 kb on + strandat 4089.354 kb on - strandat 4089.421 kb on - strandat 4089.421 kb on - strandat 4089.467 kb on - strandat 4089.467 kb on - strandat 4089.491 kb on - strandat 4089.547 kb on + strandat 4089.651 kb on - strand, within HP15_3864at 4089.902 kb on + strand, within HP15_3864at 4089.902 kb on + strand, within HP15_3864at 4089.902 kb on + strand, within HP15_3864at 4089.902 kb on + strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.910 kb on - strand, within HP15_3864at 4089.940 kb on + strand, within HP15_3864at 4090.061 kb on + strand, within HP15_3864at 4090.069 kb on - strand, within HP15_3864at 4090.118 kb on + strand, within HP15_3864at 4090.131 kb on - strand, within HP15_3864

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cobalt chloride 0.32 mM
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4,087,752 - -1.6
4,087,752 - -0.2
4,087,766 + +2.1
4,087,886 + -0.3
4,087,976 - -0.2
4,087,981 + -0.4
4,087,999 - +0.8
4,088,122 + HP15_3863 0.12 -1.5
4,088,130 - HP15_3863 0.12 -0.1
4,088,198 - HP15_3863 0.18 -1.9
4,088,225 + HP15_3863 0.20 -0.6
4,088,247 - HP15_3863 0.21 -1.7
4,088,247 - HP15_3863 0.21 -0.2
4,088,252 - HP15_3863 0.22 -0.3
4,088,285 + HP15_3863 0.24 +1.4
4,088,293 + HP15_3863 0.25 -0.2
4,088,301 - HP15_3863 0.26 -0.0
4,088,303 + HP15_3863 0.26 +0.1
4,088,325 + HP15_3863 0.28 +0.4
4,088,359 + HP15_3863 0.30 -0.2
4,088,428 - HP15_3863 0.36 -0.1
4,088,483 + HP15_3863 0.40 +0.4
4,088,487 + HP15_3863 0.40 -0.6
4,088,625 - HP15_3863 0.51 -1.1
4,088,918 + HP15_3863 0.74 +2.1
4,089,066 - HP15_3863 0.85 +0.2
4,089,066 - HP15_3863 0.85 -0.8
4,089,076 - HP15_3863 0.86 +0.7
4,089,149 + -0.2
4,089,273 - +0.7
4,089,346 + -0.8
4,089,354 - -0.8
4,089,421 - -0.0
4,089,421 - -0.1
4,089,467 - +0.4
4,089,467 - -0.7
4,089,491 - -0.8
4,089,547 + -0.4
4,089,651 - HP15_3864 0.11 -0.9
4,089,902 + HP15_3864 0.20 -0.3
4,089,902 + HP15_3864 0.20 +0.4
4,089,902 + HP15_3864 0.20 +0.4
4,089,902 + HP15_3864 0.20 +0.3
4,089,910 - HP15_3864 0.20 -0.5
4,089,910 - HP15_3864 0.20 +0.1
4,089,910 - HP15_3864 0.20 +0.4
4,089,910 - HP15_3864 0.20 -0.3
4,089,910 - HP15_3864 0.20 -0.4
4,089,910 - HP15_3864 0.20 -0.3
4,089,940 + HP15_3864 0.21 -0.2
4,090,061 + HP15_3864 0.26 +1.9
4,090,069 - HP15_3864 0.26 -0.5
4,090,118 + HP15_3864 0.28 +1.1
4,090,131 - HP15_3864 0.28 +0.3

Or see this region's nucleotide sequence