Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2451 and HP15_2452 overlap by 4 nucleotides HP15_2452 and HP15_2453 are separated by 2 nucleotides HP15_2453 and HP15_2454 overlap by 1 nucleotides HP15_2454 and HP15_2455 are separated by 95 nucleotides
HP15_2451: HP15_2451 - ribonuclease, Rne/Rng family, at 2,590,268 to 2,591,749
_2451
HP15_2452: HP15_2452 - Maf-like protein, at 2,591,746 to 2,592,351
_2452
HP15_2453: HP15_2453 - rod shape-determining protein MreD, at 2,592,354 to 2,592,830
_2453
HP15_2454: HP15_2454 - rod shape-determining protein MreC-like protein, at 2,592,830 to 2,593,660
_2454
HP15_2455: HP15_2455 - rod shaping protein MreB, at 2,593,756 to 2,594,799
_2455
Position (kb)
2592
2593 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2591.404 kb on + strand, within HP15_2451 at 2591.412 kb on - strand, within HP15_2451 at 2592.003 kb on - strand, within HP15_2452 at 2592.003 kb on - strand, within HP15_2452 at 2592.008 kb on - strand, within HP15_2452 at 2592.031 kb on + strand, within HP15_2452 at 2592.073 kb on + strand, within HP15_2452 at 2592.179 kb on - strand, within HP15_2452 at 2592.205 kb on + strand, within HP15_2452 at 2592.360 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,591,404 + HP15_2451 0.77 -2.3 2,591,412 - HP15_2451 0.77 -0.8 2,592,003 - HP15_2452 0.42 -0.3 2,592,003 - HP15_2452 0.42 +0.2 2,592,008 - HP15_2452 0.43 -0.2 2,592,031 + HP15_2452 0.47 -0.4 2,592,073 + HP15_2452 0.54 -0.1 2,592,179 - HP15_2452 0.71 -0.2 2,592,205 + HP15_2452 0.76 -0.5 2,592,360 - +1.9
Or see this region's nucleotide sequence