Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2132 and HP15_2133 are separated by 99 nucleotides HP15_2133 and HP15_2134 are separated by 24 nucleotides
HP15_2132: HP15_2132 - polyhydroxyalkanoic acid synthase, at 2,232,819 to 2,234,621
_2132
HP15_2133: HP15_2133 - solute symporter-like protein, at 2,234,721 to 2,236,085
_2133
HP15_2134: HP15_2134 - conserved hypothetical protein, at 2,236,110 to 2,237,111
_2134
Position (kb)
2234
2235
2236
2237 Strain fitness (log2 ratio)
-2
-1
0
1 at 2233.838 kb on + strand, within HP15_2132 at 2233.921 kb on - strand, within HP15_2132 at 2234.007 kb on + strand, within HP15_2132 at 2234.015 kb on - strand, within HP15_2132 at 2234.149 kb on + strand, within HP15_2132 at 2234.208 kb on - strand, within HP15_2132 at 2234.221 kb on + strand, within HP15_2132 at 2234.269 kb on + strand, within HP15_2132 at 2234.315 kb on + strand, within HP15_2132 at 2234.443 kb on + strand at 2234.599 kb on - strand at 2234.616 kb on + strand at 2234.895 kb on - strand, within HP15_2133 at 2235.053 kb on + strand, within HP15_2133 at 2235.212 kb on + strand, within HP15_2133 at 2235.559 kb on + strand, within HP15_2133 at 2235.572 kb on - strand, within HP15_2133 at 2235.607 kb on - strand, within HP15_2133 at 2235.622 kb on - strand, within HP15_2133 at 2235.633 kb on + strand, within HP15_2133 at 2235.738 kb on + strand, within HP15_2133 at 2235.858 kb on - strand, within HP15_2133 at 2235.897 kb on + strand, within HP15_2133 at 2236.031 kb on + strand at 2236.036 kb on + strand at 2236.054 kb on - strand at 2236.054 kb on - strand at 2236.193 kb on - strand at 2236.264 kb on - strand, within HP15_2134 at 2236.283 kb on + strand, within HP15_2134 at 2236.443 kb on - strand, within HP15_2134 at 2236.463 kb on - strand, within HP15_2134 at 2236.496 kb on + strand, within HP15_2134 at 2236.660 kb on + strand, within HP15_2134 at 2236.699 kb on + strand, within HP15_2134 at 2236.834 kb on + strand, within HP15_2134 at 2236.834 kb on + strand, within HP15_2134 at 2236.842 kb on - strand, within HP15_2134 at 2236.985 kb on + strand, within HP15_2134
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 2,233,838 + HP15_2132 0.57 +0.4 2,233,921 - HP15_2132 0.61 +0.3 2,234,007 + HP15_2132 0.66 +1.1 2,234,015 - HP15_2132 0.66 -0.2 2,234,149 + HP15_2132 0.74 +0.8 2,234,208 - HP15_2132 0.77 +0.2 2,234,221 + HP15_2132 0.78 +1.5 2,234,269 + HP15_2132 0.80 -0.0 2,234,315 + HP15_2132 0.83 +0.5 2,234,443 + +0.2 2,234,599 - -0.4 2,234,616 + +0.5 2,234,895 - HP15_2133 0.13 +0.3 2,235,053 + HP15_2133 0.24 -0.1 2,235,212 + HP15_2133 0.36 -1.0 2,235,559 + HP15_2133 0.61 -0.7 2,235,572 - HP15_2133 0.62 -0.2 2,235,607 - HP15_2133 0.65 -0.5 2,235,622 - HP15_2133 0.66 -0.8 2,235,633 + HP15_2133 0.67 -0.8 2,235,738 + HP15_2133 0.75 +0.5 2,235,858 - HP15_2133 0.83 +0.1 2,235,897 + HP15_2133 0.86 +0.2 2,236,031 + +0.4 2,236,036 + +0.4 2,236,054 - +0.3 2,236,054 - +0.2 2,236,193 - -0.0 2,236,264 - HP15_2134 0.15 +0.3 2,236,283 + HP15_2134 0.17 -1.0 2,236,443 - HP15_2134 0.33 +0.0 2,236,463 - HP15_2134 0.35 -2.4 2,236,496 + HP15_2134 0.39 -0.1 2,236,660 + HP15_2134 0.55 +0.0 2,236,699 + HP15_2134 0.59 -0.0 2,236,834 + HP15_2134 0.72 +0.1 2,236,834 + HP15_2134 0.72 -0.2 2,236,842 - HP15_2134 0.73 +0.5 2,236,985 + HP15_2134 0.87 -0.2
Or see this region's nucleotide sequence