Experiment: m.b. Nickel (II) chloride 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_189 and HP15_190 are separated by 240 nucleotides HP15_190 and HP15_191 are separated by 290 nucleotides HP15_191 and HP15_192 are separated by 445 nucleotides HP15_192 and HP15_193 overlap by 4 nucleotides
HP15_189: HP15_189 - plasmidpTOM9-like protein, at 178,941 to 179,636
_189
HP15_190: HP15_190 - protein containing methyltransferase type 12 domain, at 179,877 to 180,323
_190
HP15_191: HP15_191 - Hg(II)--responsive transcriptional regulator, at 180,614 to 181,048
_191
HP15_192: HP15_192 - Hg(II)-transport protein perimplasmic component, at 181,494 to 181,796
_192
HP15_193: HP15_193 - conserved hypothetical protein, membrane, at 181,793 to 182,053
_193
HP15_194: HP15_194 - mercuric ion reductase, at 182,043 to 183,449
_194
Position (kb) 180
181
182 Strain fitness (log2 ratio) -1
0
1
2
3 at 179.648 kb on - strand at 179.700 kb on - strand at 179.769 kb on + strand at 179.787 kb on - strand at 179.834 kb on - strand at 179.901 kb on + strand at 179.953 kb on + strand, within HP15_190 at 179.954 kb on - strand, within HP15_190 at 180.046 kb on - strand, within HP15_190 at 180.208 kb on - strand, within HP15_190 at 180.215 kb on + strand, within HP15_190 at 180.222 kb on - strand, within HP15_190 at 180.237 kb on + strand, within HP15_190 at 180.296 kb on + strand at 180.296 kb on + strand at 180.316 kb on - strand at 180.322 kb on + strand at 180.504 kb on - strand at 180.594 kb on - strand at 180.605 kb on + strand at 180.653 kb on + strand at 180.686 kb on - strand, within HP15_191 at 180.716 kb on + strand, within HP15_191 at 180.729 kb on - strand, within HP15_191 at 180.892 kb on - strand, within HP15_191 at 180.916 kb on + strand, within HP15_191 at 181.098 kb on - strand at 181.110 kb on + strand at 181.152 kb on + strand at 181.164 kb on + strand at 181.344 kb on + strand at 181.362 kb on + strand at 181.433 kb on - strand at 181.459 kb on - strand at 181.520 kb on + strand at 181.522 kb on + strand at 181.544 kb on + strand, within HP15_192 at 181.572 kb on + strand, within HP15_192 at 181.584 kb on + strand, within HP15_192 at 181.592 kb on - strand, within HP15_192 at 181.602 kb on + strand, within HP15_192 at 181.634 kb on + strand, within HP15_192 at 181.661 kb on + strand, within HP15_192 at 181.669 kb on - strand, within HP15_192 at 181.669 kb on - strand, within HP15_192 at 181.698 kb on - strand, within HP15_192 at 181.716 kb on - strand, within HP15_192 at 181.716 kb on - strand, within HP15_192 at 181.732 kb on - strand, within HP15_192 at 181.751 kb on + strand, within HP15_192 at 181.790 kb on + strand at 181.826 kb on - strand, within HP15_193 at 181.838 kb on + strand, within HP15_193 at 181.857 kb on + strand, within HP15_193 at 181.857 kb on + strand, within HP15_193 at 181.890 kb on + strand, within HP15_193 at 181.957 kb on - strand, within HP15_193 at 181.959 kb on + strand, within HP15_193 at 181.959 kb on + strand, within HP15_193 at 181.967 kb on - strand, within HP15_193 at 181.975 kb on - strand, within HP15_193
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nickel (II) chloride 1 mM remove 179,648 - -0.0 179,700 - -0.4 179,769 + -0.2 179,787 - +0.7 179,834 - -1.7 179,901 + +0.9 179,953 + HP15_190 0.17 -0.3 179,954 - HP15_190 0.17 +1.0 180,046 - HP15_190 0.38 -0.8 180,208 - HP15_190 0.74 -0.1 180,215 + HP15_190 0.76 +0.8 180,222 - HP15_190 0.77 -0.7 180,237 + HP15_190 0.81 -0.2 180,296 + -0.2 180,296 + +0.2 180,316 - +0.0 180,322 + +0.0 180,504 - -0.5 180,594 - +0.3 180,605 + +0.1 180,653 + +0.1 180,686 - HP15_191 0.17 +0.0 180,716 + HP15_191 0.23 -1.1 180,729 - HP15_191 0.26 +0.0 180,892 - HP15_191 0.64 -1.5 180,916 + HP15_191 0.69 +0.4 181,098 - +0.9 181,110 + -0.3 181,152 + +1.0 181,164 + +0.2 181,344 + -0.6 181,362 + -0.2 181,433 - +0.7 181,459 - +0.7 181,520 + +0.4 181,522 + +0.1 181,544 + HP15_192 0.17 -0.1 181,572 + HP15_192 0.26 +0.6 181,584 + HP15_192 0.30 -0.4 181,592 - HP15_192 0.32 +1.6 181,602 + HP15_192 0.36 +1.3 181,634 + HP15_192 0.46 -1.0 181,661 + HP15_192 0.55 -0.3 181,669 - HP15_192 0.58 +2.8 181,669 - HP15_192 0.58 +0.5 181,698 - HP15_192 0.67 +0.8 181,716 - HP15_192 0.73 -0.7 181,716 - HP15_192 0.73 -0.5 181,732 - HP15_192 0.79 +0.5 181,751 + HP15_192 0.85 +0.3 181,790 + -0.2 181,826 - HP15_193 0.13 +0.3 181,838 + HP15_193 0.17 +0.8 181,857 + HP15_193 0.25 -0.2 181,857 + HP15_193 0.25 +0.1 181,890 + HP15_193 0.37 +1.6 181,957 - HP15_193 0.63 -0.4 181,959 + HP15_193 0.64 +0.6 181,959 + HP15_193 0.64 -1.0 181,967 - HP15_193 0.67 +0.2 181,975 - HP15_193 0.70 -1.0
Or see this region's nucleotide sequence