Experiment: D-Fructose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS26010 and BPHYT_RS26015 are separated by 157 nucleotides BPHYT_RS26015 and BPHYT_RS26020 are separated by 35 nucleotides BPHYT_RS26020 and BPHYT_RS26025 are separated by 35 nucleotides
BPHYT_RS26010: BPHYT_RS26010 - ABC transporter substrate-binding protein, at 1,411,688 to 1,412,698
_RS26010
BPHYT_RS26015: BPHYT_RS26015 - rod shape-determining protein MreB, at 1,412,856 to 1,413,899
_RS26015
BPHYT_RS26020: BPHYT_RS26020 - GntR family transcriptional regulator, at 1,413,935 to 1,414,693
_RS26020
BPHYT_RS26025: BPHYT_RS26025 - hypothetical protein, at 1,414,729 to 1,415,124
_RS26025
Position (kb) 1412
1413
1414 Strain fitness (log2 ratio) -1
0
1 at 1411.907 kb on + strand, within BPHYT_RS26010 at 1412.429 kb on + strand, within BPHYT_RS26010 at 1412.430 kb on - strand, within BPHYT_RS26010 at 1412.639 kb on + strand at 1412.640 kb on - strand at 1413.475 kb on - strand, within BPHYT_RS26015 at 1413.475 kb on - strand, within BPHYT_RS26015 at 1413.891 kb on + strand at 1414.372 kb on + strand, within BPHYT_RS26020
Per-strain Table
Position Strand Gene LocusTag Fraction D-Fructose (C) remove 1,411,907 + BPHYT_RS26010 0.22 +0.5 1,412,429 + BPHYT_RS26010 0.73 -0.1 1,412,430 - BPHYT_RS26010 0.73 -0.1 1,412,639 + +0.2 1,412,640 - -0.8 1,413,475 - BPHYT_RS26015 0.59 -0.2 1,413,475 - BPHYT_RS26015 0.59 -0.7 1,413,891 + +0.7 1,414,372 + BPHYT_RS26020 0.58 -0.8
Or see this region's nucleotide sequence